Contig 006031:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027E10Sequence531006031 (3)ref|XP_004236745.1|1e-42PREDICTED: protein kinase APK1A, chloroplastic [Solanum lycopersicum]466009467 (7)
JMFF035P03Sequence527006031 (3)gb|AIU96237.1|1e-07serine/threonine-protein kinase BIK1, partial [Nicotiana benthamiana]632009467 (7)ref|XP_009759469.1|1e-26PREDICTED: protein kinase APK1A, chloroplastic-like [Nicotiana sylvestris]
JMFF051M11Sequence648006031 (3)ref|XP_004236745.1|1e-65PREDICTED: protein kinase APK1A, chloroplastic [Solanum lycopersicum]381009467 (7)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF051M11+ AGATTGGGATGGGATAGCTGCC
                      ____________________________________________________________
consensus AGATTGGGATGGGATAGCTGCC
 
. : . : . : . : . : . :
JMFF051M11+ CGAGGTAAGTAATCTCTGTCAGCCATTCCTTGTGACCTGAAGGCNCTTCTGATTTCAGTC
                      ____________________________________________________________
consensus CGAGGTAAGTAATCTCTGTCAGCCATTCCTTGTGACCTGAAGGCNCTTCTGATTTCAGTC
 
. : . : . : . : . : . :
JMFF027E10+ GGCTGCCTTGAACGTATTCTCGTCAA
JMFF051M11+ TCTTCACGGCTATTATCAATCCAGTCCCGGGCCTGGCTGCCTTGAACGTATTCTCGTCAA
                      ____________________________________________________________
consensus TCTTCACGGCTATTATCAATCCAGTCCCGGGCCTGGCTGCCTTGAACGTATTCTCGTCAA
 
. : . : . : . : . : . :
JMFF027E10+ TCCATCCCTTGAAGACACAACCGAAACCTCCTTCCCCCAACACACTATCGGGCCGGAAGT
JMFF051M11+ TCCATCCCTTGAAGACACAACCGAAACCTCCTTCCCCCAACACACTATCGGGCCGGAAGT
                      ____________________________________________________________
consensus TCCATCCCTTGAAGACACAACCGAAACCTCCTTCCCCCAACACACTATCGGGCCGGAAGT
 
. : . : . : . : . : . :
JMFF027E10+ TTCTGGTGGCTATTTTGAGTTCATTGAAAGTAAAGTTCTTAAGATTCGATGAGTCCAGAA
JMFF051M11+ TTCTGGTGGCTATTTTGAGTTCATTGAAAGTAAAGTTCTTAAGATTCGATGAGTCCAGAA
                      ____________________________________________________________
consensus TTCTGGTGGCTATTTTGAGTTCATTGAAAGTAAAGTTCTTAAGATTCGATGAGTCCAGAA
 
. : . : . : . : . : . :
JMFF027E10+ TATCACTCTCTTTCCTAGGGGTCATTGGGGCCGAGGCAAACGAAAGTCTTTTGCTCAACT
JMFF051M11+ TATCACTCTCTTTCCTAGGGGTCATTGGGGCCGAGGCAAACGAAAGTCTTTTGCTCAACT
JMFF035P03+ CCTAGGGGTCATTGGGGCCGAGGCAAACGAAAGTCTTTTGCTCAACT
                      ____________________________________________________________
consensus TATCACTCTCTTTCCTAGGGGTCATTGGGGCCGAGGCAAACGAAAGTCTTTTGCTCAACT
 
. : . : . : . : . : . :
JMFF027E10+ CTTTAGCTCCAGTATGGAGAGGGCTCTCTGCCTTAATTCTGACACTGAAACAAGAACCCA
JMFF051M11+ CTTTAGCTCCAGTATGGAGAGGGCTCTCTGCCTTAATTCTGACACTGAAACAAGAACCCA
JMFF035P03+ CTTTAGCTCCAGTATGGAGAGGGCTCTCTGCCTTAATTCTGACACTGAAACAAGAACCCA
                      ____________________________________________________________
consensus CTTTAGCTCCAGTATGGAGAGGGCTCTCTGCCTTAATTCTGACACTGAAACAAGAACCCA
 
. : . : . : . : . : . :
JMFF027E10+ TGAATTTGATCAATCTTTCTCTCTCTCTCTCTGCTTCTCTTTCGGTCTTTCCTCCAAGAA
JMFF051M11+ TGAATTTGATCAATCTTTCTCTCTCTCTCTCTGCTTCTCTTTCGGTCTTTCCTCCAAGAA
JMFF035P03+ TGAATTTGATCAATCTTTCTCTCTCTCTCTCTGCTTCTCTTTCGGTCTTTCCTCCAAGAA
                      ____________________________________________________________
consensus TGAATTTGATCAATCTTTCTCTCTCTCTCTCTGCTTCTCTTTCGGTCTTTCCTCCAAGAA
 
. : . : . : . : . : . :
JMFF027E10+ AAGAGCTTTCTTTGGCTTCTTAAACCCTTGGAAAATAGCAGTGGTTCTTGAATGATTCTA
JMFF051M11+ AAGAGCTTTCTTTGGCTTCTTAAACCCTTGGAAAATAGCAGTGGTTCTTGAATGATTCTA
JMFF035P03+ AAGAGCTTTCTTTGGCTTCTTAAACCCTTGGAAAATAGCAGTGGTTCTTGAATGATTCTA
                      ____________________________________________________________
consensus AAGAGCTTTCTTTGGCTTCTTAAACCCTTGGAAAATAGCAGTGGTTCTTGAATGATTCTA
 
. : . : . : . : . : . :
JMFF027E10+ AGATAATTGTGTAATAAACCGAGCCACAACAACCAAACCAGATCAGAACACAAAGATGTG
JMFF051M11+ AGATAATTGTGTAATAAACCGAGCCACAACAACCAAACCAGATCAGAACACAAAGATGTG
JMFF035P03+ AGATAATTGTGTAATAAACCGAGCCACAACAACCAAACCAGATCAGAACACAAAGATGTG
                      ____________________________________________________________
consensus AGATAATTGTGTAATAAACCGAGCCACAACAACCAAACCAGATCAGAACACAAAGATGTG
 
. : . : . : . : . : . :
JMFF027E10+ AACATTTTGAATATTTGTCATTTGTTTGGTTTGTCTTTCACGAGAACCTCTCCTCTTCCA
JMFF051M11+ AACATTTTGAATATTTGTCATTTGTTTGGTTTGTCTTTCACGAGAACCTCTCCTCTTCCA
JMFF035P03+ AACATTTTGAATATTTGTCATTTGTTTGGTTTGTCTTTCACGAGAACCTCTCCTCTTCCA
                      ____________________________________________________________
consensus AACATTTTGAATATTTGTCATTTGTTTGGTTTGTCTTTCACGAGAACCTCTCCTCTTCCA
 
. : . : . : . : . : . :
JMFF027E10+ GAACCTCACCAACGGCCAAAGCCCT
JMFF051M11+ GAACCTCACCAACGGCCAAAGCCCT
JMFF035P03+ GAACCTCACCAACGGCCAAAGCCCTAAAACGTTTGTTTGACTTGTCCTCGTTTAATCAGT
                      ____________________________________________________________
consensus GAACCTCACCAACGGCCAAAGCCCTAAAACGTTTGTTTGACTTGTCCTCGTTTAATCAGT
 
. : . : . : . : . : . :
JMFF035P03+ CTGGTCTTCTTCTGCCACCCTCATTTTCTTGTTCACACGCCTCTCCACTCTCCATTAAAC
                      ____________________________________________________________
consensus CTGGTCTTCTTCTGCCACCCTCATTTTCTTGTTCACACGCCTCTCCACTCTCCATTAAAC
 
. : . : . : . : . : . :
JMFF035P03+ CCACGGTTAAAAGCTTTGCTAACATTTAAAATTTGGAATTAATTAGGTTTTTTTATGTCC
                      ____________________________________________________________
consensus CCACGGTTAAAAGCTTTGCTAACATTTAAAATTTGGAATTAATTAGGTTTTTTTATGTCC