| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF032F23 | Sequence | 609 | 006013 (10) | emb|CBI19420.3| | 9e-37 | unnamed protein product [Vitis vinifera] | 776 | 013749 (4) | ref|XP_009791060.1| | 7e-48 | PREDICTED: transcription initiation factor TFIID subunit 4b-like, partial [Nico |
| JMFS009A09 | Sequence | 627 | 006013 (10) | ref|XP_009793390.1| | 5e-41 | PREDICTED: transcription initiation factor TFIID subunit 4b-like isoform X2 [Ni | |||||
| JMFS023H10 | Sequence | 539 | 006013 (10) | emb|CBI19420.3| | 4e-37 | unnamed protein product [Vitis vinifera] | |||||
| JMFS023H11 | Sequence | 539 | 006013 (10) | emb|CBI19420.3| | 4e-37 | unnamed protein product [Vitis vinifera] | |||||
| JMFS034A06 | Sequence | 621 | 006013 (10) | ref|XP_009793390.1| | 1e-40 | PREDICTED: transcription initiation factor TFIID subunit 4b-like isoform X2 [Ni | |||||
| JMFS037F09 | Sequence | 621 | 006013 (10) | ref|XP_009793390.1| | 1e-40 | PREDICTED: transcription initiation factor TFIID subunit 4b-like isoform X2 [Ni | |||||
| JMFS132E04 | Sequence | 405 | 006013 (10) | emb|CBI19420.3| | 6e-29 | unnamed protein product [Vitis vinifera] | |||||
| JMFS134E08 | Sequence | 539 | 006013 (10) | ref|XP_009793383.1| | 6e-29 | PREDICTED: transcription initiation factor TFIID subunit 4b-like isoform X1 [Ni | |||||
| JMSF026N17 | Sequence | 288 | 006013 (10) | ref|XP_010664529.1| | 2e-20 | PREDICTED: transcription initiation factor TFIID subunit 4b-like [Vitis vinifer | 658 | 013749 (4) | ref|XP_009791060.1| | 7e-41 | PREDICTED: transcription initiation factor TFIID subunit 4b-like, partial [Nico |
| JMSF051F03 | Sequence | 698 | 006013 (10) | ref|XP_009793383.1| | 1e-44 | PREDICTED: transcription initiation factor TFIID subunit 4b-like isoform X1 [Ni | 776 | 013749 (4) | ref|XP_009791060.1| | 2e-56 | PREDICTED: transcription initiation factor TFIID subunit 4b-like, partial [Nico |
This contig is upended
. : . : . : . : . : . :
JMFS134E08+ AGGGAATAACATGGCA
____________________________________________________________
consensus AGGGAATAACATGGCA
. : . : . : . : . : . :
JMFS134E08+ AAAGGCCCTTGTTTCCCATGCTTAAGTGCATTACCCGTAGATGGGCTGCCAGTCGCTGAG
____________________________________________________________
consensus AAAGGCCCTTGTTTCCCATGCTTAAGTGCATTACCCGTAGATGGGCTGCCAGTCGCTGAG
. : . : . : . : . : . :
JMFS134E08+ GCCATATCTGTTTGATTGATCATCCCTGTTGTGACAGGTTGCTGACTACTCGTCCCAACA
JMSF051F03+ GTCCCAACA
____________________________________________________________
consensus GCCATATCTGTTTGATTGATCATCCCTGTTGTGACAGGTTGCTGACTACTCGTCCCAACA
. : . : . : . : . : . :
JMFS134E08+ GACATCGACTGTTGACCAGTCATAGCTGTGGACATGGATTGTTGAGTACTAATACCATGC
JMFS037F09+ TGAGTACTAATACCATGC
JMFS034A06+ TGAGTACTAATACCATGC
JMSF051F03+ GACATCGACTGTTGACCAGTCATAGCTGTGGACATGGATTGTTGAGTACTAATACCATGC
JMFS009A09+ TGAGTACTAATACCATGC
____________________________________________________________
consensus GACATCGACTGTTGACCAGTCATAGCTGTGGACATGGATTGTTGAGTACTAATACCATGC
. : . : . : . : . : . :
JMFS134E08+ AAGTTGAGATGTTGAGGTTCTGGGTTTTGTGTTCTATTATGCTCCTGTGTAGGGACAGAG
JMFS037F09+ AAGTTGAGATGTTGAGGTTCTGGGTTNTGTGTTCTATTATGCTCCTGTGTAGGGACAGAG
JMFS034A06+ AAGTTGAGATGTTGAGGTTCTGGGTTNTGTGTTCTATTATGCTCCTGTGTAGGGACAGAG
JMSF051F03+ AAGTTGAGATGTTGAGGTTCTGGGTTTTGTGTTCTATTATGCTCCTGTGTAGGGACAGAG
JMFS009A09+ AAGTTGAGATGTTGAGGTTCTGGGTTNTGTGTTCTATTATGCTCCTGTGTAGGGACAGAG
JMFF032F23+ GGGACAGAG
____________________________________________________________
consensus AAGTTGAGATGTTGAGGTTCTGGGTTTTGTGTTCTATTATGCTCCTGTGTAGGGACAGAG
. : . : . : . : . : . :
JMFS134E08+ TTCTTATCAGAGCTCTGCACGTCCATTGGTCGAAGCATGGGTTGTTCAGGCTGCGATGGC
JMFS037F09+ TTCTTATCAGAGCTCTGCACGTCCATTGGTCGAAGCATGGGTTGTTCAGGCTGCGATGGC
JMFS034A06+ TTCTTATCAGAGCTCTGCACGTCCATTGGTCGAAGCATGGGTTGTTCAGGCTGCGATGGC
JMSF051F03+ TTCTTATCAGAGCTCTGCACGTCCATTGGTCGAAGCATGGGTTGTTCAGGCTGCGATGGC
JMFS009A09+ TTCTTATCAGAGCTCTGCACGTCCATTGGTCGAAGCATGGGTTGTTCAGGCTGCGATGGC
JMFS023H10+ GCTCTGCACGTCCATTGGTCGAAGCATGGGTTGTTCAGGCTGCGATGGC
JMFS023H11+ GCTCTGCACGTCCATTGGTCGAAGCATGGGTTGTTCAGGCTGCGATGGC
JMFF032F23+ TTCTTATCAGAGCTCTGCACGTCCATTGGTCGAAGCATGGGTTGTTCAGGCTGCGATGGC
____________________________________________________________
consensus TTCTTATCAGAGCTCTGCACGTCCATTGGTCGAAGCATGGGTTGTTCAGGCTGCGATGGC
. : . : . : . : . : . :
JMFS134E08+ TGTCCATCTTTGGAGGATAGATGCTGTAGAGGGAGGGAACTCATCTCCTGCGACAAATCA
JMFS037F09+ TGTCCATCTTTGGAGGATAGATGCTGTAGAGGGAGGGAATTCATCTCCTGCGACAAATCA
JMFS034A06+ TGTCCATCTTTGGAGGATAGATGCTGTAGAGGGAGGGAATTCATCTCCTGCGACAAATCA
JMSF051F03+ TGTCCATCTTTGGAGGATAGATGCTGTAGAGGGAGGGAATTCATCTCCTGCGACAAATCA
JMFS009A09+ TGTCCATCTTTGGAGGATAGATGCTGTAGAGGGAGGGAATTCATCTCCTGCGACAAATCA
JMFS023H10+ TGTCCATCTTTGGAGGATAGATGCTGTAGAGGGAGGGAATTCATCTCCTGCGACAAATCA
JMFS023H11+ TGTCCATCTTTGGAGGATAGATGCTGTAGAGGGAGGGAATTCATCTCCTGCGACAAATCA
JMFF032F23+ TGTCCATCTTTGGAGGATAGATGCTGTAGAGGGAGGGAATTCATCTCCTGCGACAAATCA
____________________________________________________________
consensus TGTCCATCTTTGGAGGATAGATGCTGTAGAGGGAGGGAATTCATCTCCTGCGACAAATCA
. : . : . : . : . : . :
JMFS134E08+ ATTTGTTGTTGATTGTCCGTGTCTTGACCNNGCCGCTTTAGCTCCATTTCCGATGAATTA
JMFS037F09+ ATTTGTTGTTGATTGTCCGTGTCTTGACCCTGCCGCTTTAGCTCCATTTCCGATGAATTA
JMFS034A06+ ATTTGTTGTTGATTGTCCGTGTCTTGACCCTGCCGCTTTAGCTCCATTTCCGATGAATTA
JMSF051F03+ ATTTGTTGTTGATTGTCCGTGTCTTGACCCTGCCGCTTTAGCTCCATTTCCGATGAATTA
JMFS009A09+ ATTTGTTGTTGATTGTCCGTGTCTTGACCCTGCCGCTTTAGCTCCATTTCCGATGAATTA
JMFS023H10+ ATTTGTTGTTGATTGTCCGTGTCTTGACCCTGCCGCTTTAGCTCCATTTCCGATGAATTA
JMFS132E04+ TTGTCCGTGTCTTGACCCTGCCGCTTTAGCTCCATTTCCGATGAATCA
JMFS023H11+ ATTTGTTGTTGATTGTCCGTGTCTTGACCCTGCCGCTTTAGCTCCATTTCCGATGAATTA
JMFF032F23+ ATTTGTTGTTGATTGTCCGTGTCTTGACCCTGCCGCTTTAGCTCCATTTCCGATGAATTA
____________________________________________________________
consensus ATTTGTTGTTGATTGTCCGTGTCTTGACCCTGCCGCTTTAGCTCCATTTCCGATGAATTA
. : . : . : . : . : . :
JMFS134E08+ TTATATGATTTCTGCAGATTGTCCTTGGAATCCTGAAGACTCTGAGGCATGGTATTTTCA
JMFS037F09+ TTATATGATTTCTGCAGATTGTCCTTGGAATCCTGAAGACTCTGAGGCATGGTATTTTCA
JMFS034A06+ TTATATGATTTCTGCAGATTGTCCTTGGAATCCTGAAGACTCTGAGGCATGGTATTTTCA
JMSF051F03+ TTATATGATTTCTGCAGATTGTCCTTGGAATCCTGAAGACTCTGAGGCATGGTATTTTCA
JMFS009A09+ TTATATGATTTCTGCAGATTGTCCTTGGAATCCTGAAGACTCTGAGGCATGGTATTTTCA
JMFS023H10+ TTATATGATTTCTGCAGATTGTCCTTGGAATCCTGAAGACTCTGAGGCATGGTATTTTCA
JMFS132E04+ TTATATGATTTCTGCAGATTGTCCTTGGAATCCTGAAGACTCTGAGGCATGGTATTTTCA
JMFS023H11+ TTATATGATTTCTGCAGATTGTCCTTGGAATCCTGAAGACTCTGAGGCATGGTATTTTCA
JMFF032F23+ TTATATGATTTCTGCAGATTGTCCTTGGAATCCTGAAGACTCTGAGGCATGGTATTTTCA
____________________________________________________________
consensus TTATATGATTTCTGCAGATTGTCCTTGGAATCCTGAAGACTCTGAGGCATGGTATTTTCA
. : . : . : . : . : . :
JMFS134E08+ CCATGACTGGTGGTTTGCCAGTCAACAAACTGATTTGAGGTGT
JMFS037F09+ CCATGACTGGTGGTTTGCCAGTCAACAAACTGATTTGAGGTGTGACTGTTCCCTTGAGAT
JMFS034A06+ CCATGACTGGTGGTTTGCCAGTCAACAAACTGATTTGAGGTGTGACTGTTCCCTTGAGAT
JMSF051F03+ CCATGACTGGTGGTTTGCCAGTCAACAAACTGATTTGAGGTGTGACTGTTCCCTTGAGAT
JMFS009A09+ CCATGACTGGTGGTTTGCCAGTCAACAAACTGATTTGAGGTGTGACTGTTCCCTTGAGAT
JMFS023H10+ CCATGACTGGTGGTTTGCCAGTCAACAAACTGATTTGAGGTGTGACTGTTCCCTTGAGAT
JMFS132E04+ CCATGACTGGTGGTCTGCCAGTCAACAAACTGATTTGAGGTGTGACTGTTCCCTTGAGAT
JMSF026N17+ TTGAGGTGTGACTGTTCCCTTGAGAT
JMFS023H11+ CCATGACTGGTGGTTTGCCAGTCAACAAACTGATTTGAGGTGTGACTGTTCCCTTGAGAT
JMFF032F23+ CCATGACTGGTGGTTTGCCAGTCAACAAACTGATTTGAGGTGTGACTGTTCCCTTGAGAT
____________________________________________________________
consensus CCATGACTGGTGGTTTGCCAGTCAACAAACTGATTTGAGGTGTGACTGTTCCCTTGAGAT
. : . : . : . : . : . :
JMFS037F09+ AACACGCCGCCGGAATCTGCAGGCTGAGATGTGGAAGTATCTACTCCTTCGATATGTCTA
JMFS034A06+ AACACGCCGCCGGAATCTGCAGGCTGAGATGTGGAAGTATCTACTCCTTCGATATGTCTA
JMSF051F03+ AACACGCCGCCGGAATCTGCAGGCTGAGATGTGGAAGTATCTACTCCTTCGATATGTCTA
JMFS009A09+ AACACGCCGCCGGAATCTGCAGGCTGAGATGTGGAAGTATCTACTCCTTCGATATGTCTA
JMFS023H10+ AACACGCCGCCGGAATCTGCAGGCTGAGATGTGGAAGTATCTACTCCTTCGATATGTCTA
JMFS132E04+ AACACGCCGCCGGAATCTGCAGGCTGAGATGTGGAAGTATCTACTCCTTCGATATGTCTA
JMSF026N17+ AACACGCCGCCGGAATCTGCAGGNTGAGATGTGGAAGTATCTACTCCTTCGATATGTCTA
JMFS023H11+ AACACGCCGCCGGAATCTGCAGGCTGAGATGTGGAAGTATCTACTCCTTCGATATGTCTA
JMFF032F23+ AACACGCCGCCGGAATCTGCAGGCTGAGATGTGGAAGTATCTACTCCTTCGATATGTCTA
____________________________________________________________
consensus AACACGCCGCCGGAATCTGCAGGCTGAGATGTGGAAGTATCTACTCCTTCGATATGTCTA
. : . : . : . : . : . :
JMFS037F09+ TTTAGGGCAGCTGTGAACGCCTCCACATCCGCCCCCGAATGCATTGTTTCATCCTCGTCT
JMFS034A06+ TTTAGGGCAGCTGTGAACGCCTCCACATCCGCCCCCGAATGCATTGTTTCATCCTCGTCT
JMSF051F03+ TTTAGGGCAGCTGTGAACGCCTCCACATCCGCCCCCGAATGCATTGTTTCATCCTCGTCT
JMFS009A09+ TTTAGGGCAGCTGTGAACGCCTCCACATCCGCCCCCGAATGCATTGTTTCATCCTCGTCT
JMFS023H10+ TTTAGGGCAGCTGTGAACGCCTCCACATCCGCCCCCGAATGCATTGTTTCATCCTCGTCT
JMFS132E04+ TTTAGGGCAGCTGTGAACGCCTCCACATCCGCCCCCGAATGCATTGTTTCATCCTCGTCT
JMSF026N17+ TTTAGGGCAGCTGTGAACGCCTCCACATCCGCCCCNGAATGCATTGTTTCATCCTCGTCT
JMFS023H11+ TTTAGGGCAGCTGTGAACGCCTCCACATCCGCCCCCGAATGCATTGTTTCATCCTCGTCT
JMFF032F23+ TTTAGGGCAGCTGTGAACGCCTCCACATCCGCCCCCGAATGCATTGTTTCATCCTCGTCT
____________________________________________________________
consensus TTTAGGGCAGCTGTGAACGCCTCCACATCCGCCCCCGAATGCATTGTTTCATCCTCGTCT
. : . : . : . : . : . :
JMFS037F09+ TCTTCGAGGAGTTTCATGATTGAAGGGTCCATCGCTGGCGTGCGTTAAATTTCGAAATTG
JMFS034A06+ TCTTCGAGGAGTTTCATGATTGAAGGGTCCATCGCTGGCGTGCGTTAAATTTCGAAATTG
JMSF051F03+ TCTTCGAGGAGTTTCATGATTGAAGGGTCCATCGCTGGCGTGCGTTAAATTTCGAAATTG
JMFS009A09+ TCTTCGAGGAGTTTCATGATTGAAGGGTCCATCGCTGGCGTGCGTTAAATTTCGAAATTG
JMFS023H10+ TCTTCGAGGAGTTTCATGATTGAAGGGTCCATCGCTGGCGTGCGTTAAATTTCGAAATTG
JMFS132E04+ TCTTCGAGGAGTTTCATGATTGAAGGGTCCATCGCTGGCGTGCGTTAAATTTCGAAATTG
JMSF026N17+ TCTTNGAGGAGTTTCATGATTGAAGGGTCCATCGCTGGCGTGCGTTAAATTTCGAAANTG
JMFS023H11+ TCTTCGAGGAGTTTCATGATTGAAGGGTCCATCGCTGGCGTGCGTTAAATTTCGAAATTG
JMFF032F23+ TCTTCGAGGAGTTTCATGATTGAAGGGTCCATCGCTGGCGTGCGTTAAATTTCGAAATTG
____________________________________________________________
consensus TCTTCGAGGAGTTTCATGATTGAAGGGTCCATCGCTGGCGTGCGTTAAATTTCGAAATTG
. : . : . : . : . : . :
JMFS037F09+ ATTCAAAGTACTCTCCGAAGTCCGGCGGGATCCCTGGCCGGGGAGAAGGTGATTTTCAGA
JMFS034A06+ ATTCAAAGTACTCTCCGAAGTCCGGCGGGATCCCTGGCCGGGGAGAAGGTGATTTTCAGA
JMSF051F03+ ATTCAAAGTACTCTCCGAAGTCCGGCGGGATCCCTGGCCGGGGAGAAGGTGATTTTCAGA
JMFS009A09+ ATTCAAAGTACTCTCCGAAGTCCGGCGGGATCCCTGGCCGGGGAGAAGGTGATTTTCAGA
JMFS023H10+ ATTCAAAGTACTCTCCGAAGTCCGGCGGGATCCCTGGCCGGGGAGAAGGTGATTTTCAGA
JMFS132E04+ ATTCAAAGTACTCTCCGAAGTCCGGCGGGATCCCTGGCCGGGGAGAAGGTGATTTTC
JMSF026N17+ ATTCAAAGTACTCTCCGAAGTCCGGCGGGATCCCTGGCCGGGGAGAAGGTGATTTTCAGA
JMFS023H11+ ATTCAAAGTACTCTCCGAAGTCCGGCGGGATCCCTGGCCGGGGAGAAGGTGATTTTCAGA
JMFF032F23+ ATTCAAAGTACTCTCCGAAGTCCGGCGGGATCCCTGGCCGGGGAGAAGGTGATTTTCAGA
____________________________________________________________
consensus ATTCAAAGTACTCTCCGAAGTCCGGCGGGATCCCTGGCCGGGGAGAAGGTGATTTTCAGA
. : . : . : . : . : . :
JMFS037F09+ CAA
JMFS034A06+ CAA
JMSF051F03+ CAA
JMFS009A09+ CAACAGT
JMFS023H10+ CAACAGTGTC
JMSF026N17+ CAA
JMFS023H11+ CAACAGTGTC
JMFF032F23+ CAACAGTGTCCTGGTTACATAGATCAATGTCGGACGCAGGAAGGCATACCTGTGATACTT
____________________________________________________________
consensus CAACAGTGTCCTGGTTACATAGATCAATGTCGGACGCAGGAAGGCATACCTGTGATACTT