Contig 006003:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018L19Sequence572006003 (3)ref|XP_004288217.1|2e-35PREDICTED: probable trehalose-phosphate phosphatase J [Fragaria vesca subsp. ve749002735 (4)ref|XP_004237406.1|1e-69PREDICTED: probable trehalose-phosphate phosphatase J [Solanum lycopersicum]
JMFF030F13Sequence397006003 (3)555002735 (4)ref|XP_009595324.1|1e-26PREDICTED: probable trehalose-phosphate phosphatase J [Nicotiana tomentosiformi
JMFF050H13Sequence614006003 (3)gb|KHN31363.1|9e-44Trehalose-phosphate phosphatase [Glycine soja]617002735 (4)ref|XP_009595324.1|7e-22PREDICTED: probable trehalose-phosphate phosphatase J [Nicotiana tomentosiformi

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050H13+                                                         CATCGGATCGGACA
                      ____________________________________________________________
consensus                                                           CATCGGATCGGACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050H13+           TGAAGGCGGAATCCGGGTCGTCCACGATCGGAGAGAGGGTGCCGTCGTAGTCGAGAAACA
JMFF018L19+                                       CGGAGAGAGGGTGCCGTCGTAGTCGAGAAACA
                      ____________________________________________________________
consensus             TGAAGGCGGAATCCGGGTCGTCCACGATCGGAGAGAGGGTGCCGTCGTAGTCGAGAAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050H13+           TCACAATGTTTTTTCCCTTTGAAGCCTTGATGATCTGCTCAAACATGTCCAGAGCCGAAG
JMFF018L19+           TCACAATGTTTTTTCCCTTTGAAGCCTTGATGATCTGCTCAAACATGTCCAGAGCCGAAG
                      ____________________________________________________________
consensus             TCACAATGTTTTTTCCCTTTGAAGCCTTGATGATCTGCTCAAACATGTCCAGAGCCGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050H13+           GATGCTGCATCATCCAAGTGCGGTGGTCGTCGGAAAGAGGGGTGGATTTTTGAGTGGGAG
JMFF018L19+           GATGCTGCATCATCCAAGTGCGGTGGTCGTCGGAAAGAGGGGTGGATTTTTGAGTGGGAG
                      ____________________________________________________________
consensus             GATGCTGCATCATCCAAGTGCGGTGGTCGTCGGAAAGAGGGGTGGATTTTTGAGTGGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050H13+           AAGAAGCTCTCATTGAGTCAACCCACGAGCTGACCTTGGCGGCGGCGCCATTGACGTCGA
JMFF018L19+           AAGAAGCTCTCATTGAGTCAACCCACGAGCTGACCTTGGCGGCGGCGCCATTGACGTCGA
JMFF030F13+                                  CACGAGCTGACCTTGGCGGCGGCGCCATTGACGTCGA
                      ____________________________________________________________
consensus             AAGAAGCTCTCATTGAGTCAACCCACGAGCTGACCTTGGCGGCGGCGCCATTGACGTCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050H13+           GGTTCTGGAGGAGCTCCTTGCCGGAAGTAACATCGAAGTTGATGTACCCGCCGGGGACGA
JMFF018L19+           GGTTCTGGAGGAGCTCCTTGCCGGAAGTAACATCGAAGTTGATGTACCCGCCGGGGACGA
JMFF030F13+           GGTTCTGGAGGAGCTCCTTGCCGGAAGTAACATCGAAGTTGATGTACCCGCCGGGGACGA
                      ____________________________________________________________
consensus             GGTTCTGGAGGAGCTCCTTGCCGGAAGTAACATCGAAGTTGATGTACCCGCCGGGGACGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050H13+           CCGGCGGCTTATGCCCCGCCGTCGGGAACCGGTTGGGGTCGGACACCGCCACCACATTGT
JMFF018L19+           CCGGCGGCTTATGCCCCGCCGTCGGGAACCGGTTGGGGTCGGACACCGCCACCACATTGT
JMFF030F13+           CCGGCGGCTTATGCCCCGCCGTCGGGAACCGGTTGGGGTCGGACACCGCCACCACATTGT
                      ____________________________________________________________
consensus             CCGGCGGCTTATGCCCCGCCGTCGGGAACCGGTTGGGGTCGGACACCGCCACCACATTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050H13+           GCCGCGTCATTTTTTCCTCTGCCAACCTCGTAAACAGACAACTCCGGCGTTCAAGAAAGT
JMFF018L19+           GCCGCGTCATTTTTTCCTCTGCCAACCTCGTAAACAGACAACTCCGGCGTTCAAGAAAGT
JMFF030F13+           GCCGCGTCATTTTTTCCTCTGCCAACCTCGTAAACAGACAACTCCGGCGTTCAAGAAAGT
                      ____________________________________________________________
consensus             GCCGCGTCATTTTTTCCTCTGCCAACCTCGTAAACAGACAACTCCGGCGTTCAAGAAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050H13+           AAACGAAACAGAATGCTCTGTTCCCCCAAAAAGGACTGAGAAAATGGGGTTTTGTTCTAT
JMFF018L19+           AAACGAAACAGAATGCTCTGTTCCCCCAAAAAGGACTGAGAAAATGGGGTTTTGTTCTAT
JMFF030F13+           AAACGAAACAGAATGCTCTGTTCCCCCAAAAAGGANTGAGAAAATGGGGTTTTGTTCTAT
                      ____________________________________________________________
consensus             AAACGAAACAGAATGCTCTGTTCCCCCAAAAAGGACTGAGAAAATGGGGTTTTGTTCTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050H13+           TTCCCGATACAAAAAGAAGCAAACTGTAATACCCAATAGGCTTGCTTCTAAATGCTTCGC
JMFF018L19+           TTCCCGATACAAAAAGAAGCAAACTGTAATACCCAATAGGCTTGCTTCTAAATGCTTCGC
JMFF030F13+           TTCCCGATACAAAAAGAAGCAAACTGTAATACCCAATAGGCTTGCTTNTAAATGCTTCGC
                      ____________________________________________________________
consensus             TTCCCGATACAAAAAGAAGCAAACTGTAATACCCAATAGGCTTGCTTCTAAATGCTTCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF050H13+           CAAAGACACAGAGATTTTGGGTGTTAAAGACAGGGAGAGAGAGAGAGAGAGAGAGATGGT
JMFF018L19+           CAAAGACACAGAGATTTTGGGTGTTAAAGACAGGGAGAGAGAGAGAGAGAGAGAGATGGT
JMFF030F13+           CAAAGACACAGAGATTTTGGGTGTTAAAGACAGGGAGAGAGAGAGAGAGAGAGAGATGGT
                      ____________________________________________________________
consensus             CAAAGACACAGAGATTTTGGGTGTTAAAGACAGGGAGAGAGAGAGAGAGAGAGAGATGGT