Contig 006000:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011M11Sequence528006000 (2)ref|XP_004229727.1|3e-61PREDICTED: trihelix transcription factor ASIL2 [Solanum lycopersicum]669011006 (2)ref|XP_006354664.1|101PREDICTED: uncharacterized protein LOC102594353 [Solanum tuberosum]
JMFF029M21Sequence518006000 (2)ref|XP_009592908.1|205PREDICTED: uncharacterized protein LOC104089669 [Nicotiana tomentosiformis]658011006 (2)ref|XP_006354664.1|101PREDICTED: uncharacterized protein LOC102594353 [Solanum tuberosum]

Alignment

This contig is upended


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JMFF011M11+                       CTCATCAGGTGGCGGAGAGGCGGCGGCGGCGTTGGTACCTCTTTCCAT
JMFF029M21+                                 GGCGGAGAGGCGGCGGCGGCGTTGGTACCTCTTTCCAT
                      ____________________________________________________________
consensus                         CTCATCAGGTGGCGGAGAGGCGGCGGCGGCGTTGGTACCTCTTTCCAT
 
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JMFF011M11+           GGCATCCATGAGCTTGAACAAGACCCAGGAGGAGCAGTAACGGTGGGAGCGAACGCCACC
JMFF029M21+           GGCATCCATGAGCTTGAACAAGACCCAGGAGGAGCAGTAACGGTGGGAGCGAACGCCACC
                      ____________________________________________________________
consensus             GGCATCCATGAGCTTGAACAAGACCCAGGAGGAGCAGTAACGGTGGGAGCGAACGCCACC
 
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JMFF011M11+           GTAAGGGGCGGCGCGTTGAATCTCGGCACGGTACCGTTTCCTGAGCTTCTCCATCTTGTG
JMFF029M21+           GTAAGGGGCGGCGCGTTGAATCTCGGCACGGTACCGTTTCCTGAGCTTCTCCATCTTGTG
                      ____________________________________________________________
consensus             GTAAGGGGCGGCGCGTTGAATCTCGGCACGGTACCGTTTCCTGAGCTTCTCCATCTTGTG
 
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JMFF011M11+           GCGGCACTGCACGGCGGTCTTGGGAGAATCGACGGGGCATCTGACGGCGACATCGTCGGC
JMFF029M21+           GCGGCACTGCACGGCGGTCTTGGGAGAATCGACGGGGCATCTGACGGCGACATCGTCGGC
                      ____________________________________________________________
consensus             GCGGCACTGCACGGCGGTCTTGGGAGAATCGACGGGGCATCTGACGGCGACATCGTCGGC
 
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JMFF011M11+           GACTTCCTGCCAGTGGTTGGCCCGGAGATTACCGCGGCGGAGGGAGTACCACTTGTCCCG
JMFF029M21+           GACTTCCTGCCAGTGGTTGGCCCGGAGATTACCGCGGCGGAGGGAGTACCACTTGTCCCG
                      ____________________________________________________________
consensus             GACTTCCTGCCAGTGGTTGGCCCGGAGATTACCGCGGCGGAGGGAGTACCACTTGTCCCG
 
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JMFF011M11+           ATACGCATCGATTAGGGCTATGGTTTCCTCGTGGGACCAACAAGGCGGAGGAAGGCGGCG
JMFF029M21+           ATACGCATCGATTAGGGCTATGGTTTCCTCGTGGGACCAACAAGGCGGAGGAAGGCGGCG
                      ____________________________________________________________
consensus             ATACGCATCGATTAGGGCTATGGTTTCCTCGTGGGACCAACAAGGCGGAGGAAGGCGGCG
 
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JMFF011M11+           AGAGGAGGCAGCTCCAGCGCCAGCCAGCGGCGGCGACGGTGACGATGGATAAAGGATTCT
JMFF029M21+           AGAGGAGGCAGCTCCAGCGCCAGCCAGCGGCGGCGACGGTGACGATGGATAAAGGATTCT
                      ____________________________________________________________
consensus             AGAGGAGGCAGCTCCAGCGCCAGCCAGCGGCGGCGACGGTGACGATGGATAAAGGATTCT
 
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JMFF011M11+           CAGGCGGGGTAGCAGGAAGGTCCTGATTGGACGGGGAAGACGATGCGGCCATGGAAACGN
JMFF029M21+           CAGGCGGGGTAGCAGGAAGGTCCTGATTGGACGGGGAAGACGATGCGGCCATGGAAACGG
                      ____________________________________________________________
consensus             CAGGCGGGGTAGCAGGAAGGTCCTGATTGGACGGGGAAGACGATGCGGCCATGGAAACGG
 
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JMFF011M11+           CGAACGGGGAGAGAATGGAAGCGATAAGAGGAGGAGGAGAGGGGCGGTGGGCGGTGACAT
JMFF029M21+           CGAACGGGGAGAGAATGGAAGCGATAAGAGGAGGAGGAGAGGGGCGGTGGGCGGTGACAT
                      ____________________________________________________________
consensus             CGAACGGGGAGAGAATGGAAGCGATAAGAGGAGGAGGAGAGGGGCGGTGGGCGGTGACAT