clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF024I24 | Sequence | 465 | 005994 (7) | ref|XP_010251743.1| | 3e-39 | PREDICTED: ubiquitin-conjugating enzyme E2 22 isoform X1 [Nelumbo nucifera] | 730 | 005994 (7) | ref|XP_011070029.1| | 7e-74 | PREDICTED: ubiquitin-conjugating enzyme E2 22 [Sesamum indicum] ref|XP_011070030 |
JMFF028D02 | Sequence | 577 | 005994 (7) | ref|XP_010251743.1| | 2e-66 | PREDICTED: ubiquitin-conjugating enzyme E2 22 isoform X1 [Nelumbo nucifera] | |||||
JMFF039D06 | Sequence | 520 | 005994 (7) | ref|XP_010251743.1| | 2e-71 | PREDICTED: ubiquitin-conjugating enzyme E2 22 isoform X1 [Nelumbo nucifera] | 713 | 005994 (7) | ref|XP_011070029.1| | 4e-74 | PREDICTED: ubiquitin-conjugating enzyme E2 22 [Sesamum indicum] ref|XP_011070030 |
JMFF041B19 | Sequence | 646 | 005994 (7) | ref|XP_010251743.1| | 5e-85 | PREDICTED: ubiquitin-conjugating enzyme E2 22 isoform X1 [Nelumbo nucifera] | 619 | 005994 (7) | ref|XP_011070029.1| | 1e-41 | PREDICTED: ubiquitin-conjugating enzyme E2 22 [Sesamum indicum] ref|XP_011070030 |
This contig is upended
. : . : . : . : . : . :
rJMFF041B19- AGCATGAAAATATGAGTGACTTCCCAAATCCC
rJMFF024I24- TGAGTGACTTCCCAAATCCC
____________________________________________________________
consensus AGCATGAAAATATGAGTGACTTCCCAAATCCC
. : . : . : . : . : . :
rJMFF041B19- AAATGTGGGCTATTTCATTGTTCTTAGGAAATATTGGTACCAAGAACATCATCAATCTGA
rJMFF024I24- AAATGTGGGCTATTTCATTGTTCTTAGGAAATATTGGTACCAAGAACATCATCAATCTGA
rJMFF039D06- AATGTGGGCTATTTCATTGTTCTTAGGAAATATTGGTACCAAGAACATCATCAATCTGA
____________________________________________________________
consensus AAATGTGGGCTATTTCATTGTTCTTAGGAAATATTGGTACCAAGAACATCATCAATCTGA
. : . : . : . : . : . :
rJMFF041B19- ATAATAATAATAATAATAATAGTACAAACTTCTTTCTTATGTTTACTACTACTACATTGC
rJMFF024I24- ATAATAATAATAATAATAATAGTACAAACTTCTTTCTTATGTTTACTACTACTACATTGC
rJMFF039D06- ATAATAATAATAATAATAATAGTACAAACTTCTTTCTTATGTTTACTACTACTACATTGC
____________________________________________________________
consensus ATAATAATAATAATAATAATAGTACAAACTTCTTTCTTATGTTTACTACTACTACATTGC
. : . : . : . : . : . :
rJMFF041B19- AAGGAAGTGAAAATAGAAAATTGCATCCATCCTCATTGGAAACACCTTATAATCTCTTCA
rJMFF024I24- AAGGAAGTGAAAATAGAAAATTGCATCCATCCTCATTGGAAACACCTTATAATCTCTTCA
rJMFF039D06- AAGGAAGTGAAAATAGAAAATTGCATCCATCCTCATTGGAAACACCTTATAATCTCTTCA
____________________________________________________________
consensus AAGGAAGTGAAAATAGAAAATTGCATCCATCCTCATTGGAAACACCTTATAATCTCTTCA
. : . : . : . : . : . :
rJMFF041B19- AACTTTTCTTTCTGGCATCCATCTTCTTTCTGTCTGCATGGGCCTTTGCCAACCCAGCTT
rJMFF024I24- AACTTTTCTTTCTGGCATCCATCTTCTTTCTGTCTGCATGGGCCTTTGCCAACCCAGCTT
rJMFF039D06- AACTTTTCTCTCTGGCATCCATCTTCTTTCTGTCTGCATGGGCCTTTGCCAACCCAGCTT
____________________________________________________________
consensus AACTTTTCTTTCTGGCATCCATCTTCTTTCTGTCTGCATGGGCCTTTGCCAACCCAGCTT
. : . : . : . : . : . :
rJMFF041B19- CCTTCTTTTGGGCTAGCGGGGCTGCTGCTGAACCGCAATTCGCTGTTGAACTGGGCAAAG
rJMFF024I24- CCTTCTTTTGGGCTAGCGGGGCTGCTGCTGAACCGCAATTCGCTGTTGAACTGGGCAAAG
rJMFF039D06- CCTTCTTTTGGGCTAGCGGGGCTGCTGCTGAACCGCAATTCGCTGTTGAACTGGGCAAAG
____________________________________________________________
consensus CCTTCTTTTGGGCTAGCGGGGCTGCTGCTGAACCGCAATTCGCTGTTGAACTGGGCAAAG
. : . : . : . : . : . :
rJMFF041B19- CCGGCTGGTCCAGGCTGTTCCCCGCTTTGGATGAAGGGGCGAGTGGAGATGGTTGTGGGA
rJMFF024I24- CCGGCTGGTCCAGGCTGTTCCCCGCTTTGGATGAAGGGGCGAGTGGAGATGGTTGTGGGA
rJMFF039D06- CCGGCTGGTCCAGGCTGTTCCCCGCTTTGGATGAAGGGGCGAGTGGAGATGGTTGTGGGA
____________________________________________________________
consensus CCGGCTGGTCCAGGCTGTTCCCCGCTTTGGATGAAGGGGCGAGTGGAGATGGTTGTGGGA
. : . : . : . : . : . :
rJMFF041B19- GAGGAACACTCGAGACCGCCACACTCTTCTTATCCACAAATGCTGAGGACTTTGATTGGT
rJMFF024I24- GAGGAACACTCGAGACCGCCACACTCTTCTTATCCACAAATGCTGAGGACTTTGATTGGT
rJMFF039D06- GAGGAACACTCGAGACCGCCACACTCTTCTTATCCACAAATGCTGAGGACTTTGATTGGT
____________________________________________________________
consensus GAGGAACACTCGAGACCGCCACACTCTTCTTATCCACAAATGCTGAGGACTTTGATTGGT
. : . : . : . : . : . :
rJMFF041B19- CAACATTCAGTGCAGTGGTCGATTCAGAAATCGCCCCGCCTTTTAGTTTGGGCTTCGGCT
rJMFF024I24- CAACATTCAGTGCAGTGGTCGATTCAGAAATCGCCCCGCCTTTTAGTTTGGGCTTCGGCT
rJMFF039D06- CAACATTCAGTGCAGTGGTCGATTCAGAAATCGCCCCGCCTTTTAGTTTGGGCTTCGGCT
____________________________________________________________
consensus CAACATTCAGTGCAGTGGTCGATTCAGAAATCGCCCCGCCTTTTAGTTTGGGCTTCGGCT
. : . : . : . : . : . :
rJMFF041B19- TCATAGCATGAATCCCAGTATAAAGCCTTGCAAGTCTAGCATACTCCTCGTAGTTATCTA
rJMFF024I24- TCATAGCATGAATCCCAGTATAAAGCCTTGCAAGTCTAGCATACTCCTCGTAGTTATCTA
rJMFF039D06- TCATAGCATGAATCCCAGTATAAAGCCTTGCAAGTCTAGCATACTCCTCGTAGTTATCTA
____________________________________________________________
consensus TCATAGCATGAATCCCAGTATAAAGCCTTGCAAGTCTAGCATACTCCTCGTAGTTATCTA
. : . : . : . : . : . :
rJMFF041B19- AAAGCATCTTGCCAGCCTGTTCATTTAAAGCTGATTCCGGGAAAGGT
rJMFF024I24- AAAGCATCTTGCCAGCCTGTTCATTTAAAGCTGATTCCGGGAAAGGTTCTATCAATAAAC
rJMFF039D06- AAAGCATCTTGCCAGCCTGTTCATTTAAAGCTGATTCCGGGAAAGGTTCTATCAATAAAC
JMFF041B19+ GCCTGTTCATTTAAAGCTGATTCCGGGAAAGGTTCTATCAATAAAC
____________________________________________________________
consensus AAAGCATCTTGCCAGCCTGTTCATTTAAAGCTGATTCCGGGAAAGGTTCTATCAATAAAC
. : . : . : . : . : . :
rJMFF024I24- ATCTAACCACCATTAACACGTGCCTTAAGCCAAGGTTTGGACTCCAATCCCTTTTAAGAG
rJMFF039D06- ATCTAACCACCATTAACACGTGCCTTAAGCCAAGGTTTGGACTCCAATCCCTTTTAAGAG
JMFF039D06+ ACCACCATTAACACGTGCCTTAAGCCAAGGTTTGGACTCCAATCCCTTTTAAGAG
JMFF041B19+ ATCTAACCACCATTAACACGTGCCTTAAGCCAAGGTTTGGACTCCAATCCCTTTTAAGAG
JMFF028D02+ CTTAAGCCAAGGTTTGGACTCCAATCCCTTTTAAGAG
____________________________________________________________
consensus ATCTAACCACCATTAACACGTGCCTTAAGCCAAGGTTTGGACTCCAATCCCTTTTAAGAG
. : . : . : . : . : . :
rJMFF024I24- CATTTACACAGATCTCACCGTTGGTTGCGATATTTGGATGAAAAATTTTG
rJMFF039D06- CATTTACACAGATCTCACCGTTGGTTGCGATATTTGGATGAAAAATTTTGGTCA
JMFF039D06+ CATTTACACAGATCTCACCGTTGGTTGCGATATTTGGATGAAAAATTTTGGTCAGGAAAA
JMFF041B19+ CATTTACACAGATCTCACCGTTGGTTGCGATATTTGGATGAAAAATTTTGGTCAGGAAAA
JMFF028D02+ CATTTACACAGATCTCACCGTTGGTTGCGATATTTGGATGAAAAATTTTGGTCAGGAAAA
____________________________________________________________
consensus CATTTACACAGATCTCACCGTTGGTTGCGATATTTGGATGAAAAATTTTGGTCAGGAAAA
. : . : . : . : . : . :
JMFF039D06+ AACCTTTAGGGGGTGAATGCGGGAAATCATTAGATAATATCAACTTCATGCGGAAGATGC
JMFF041B19+ AACCTTTAGGGGGTGAATGCGGGAAATCATTAGATAATATCAACTTCATGCGGAAGATGC
JMFF024I24+ AATGCGGGAAATCATTAGATAATATCAACTTCATGCGGAAGATGC
JMFF028D02+ AACCTTTAGGGGGTGAATGCGGGAAATCATTAGATAATATCAACTTCATGCGGAAGATGC
____________________________________________________________
consensus AACCTTTAGGGGGTGAATGCGGGAAATCATTAGATAATATCAACTTCATGCGGAAGATGC
. : . : . : . : . : . :
JMFF039D06+ CATTCTCATATGGAGTTCCAGCTGGCCCTTCAATATCAGCAAATATAGTTGAAAAGTCAT
JMFF041B19+ CATTCTCATATGGAGTTCCAGCTGGCCCTTCAATATCAGCAAATATAGTTGAAAAGTCAT
JMFF024I24+ CATTCTCATATGGAGTTCCAGCTGGCCCTTCAATATCAGCAAATATAGTTGAAAAGTCAT
JMFF028D02+ CATTCTCATATGGAGTTCCAGCTGGCCCTTCAATATCAGCAAATATAGTTGAAAAGTCAT
____________________________________________________________
consensus CATTCTCATATGGAGTTCCAGCTGGCCCTTCAATATCAGCAAATATAGTTGAAAAGTCAT
. : . : . : . : . : . :
JMFF039D06+ CATCATTTACTCCAACTTTAATGCCTTCGGGAGGAGTTTCATCAAGATTCTTCAATTCCT
JMFF041B19+ CATCATTTACTCCAACTTTAATGCCTTCGGGAGGAGTTTCATCAAGATTCTTCAATTCCT
JMFF024I24+ CATCATTTACTCCAACTTTAATGCCTTCGGGAGGAGTTTCATCAAGATTCTTCAATTCCT
JMFF028D02+ CATCATTTACTCCAACTTTAATGCCTTCGGGAGGAGTTTCATCAAGATTCTTCAATTCCT
____________________________________________________________
consensus CATCATTTACTCCAACTTTAATGCCTTCGGGAGGAGTTTCATCAAGATTCTTCAATTCCT
. : . : . : . : . : . :
JMFF039D06+ TAACTAATTGCTTTATCACATTTGGTGGGAGATTTTCATTGGTTGCCGCCATAGCCAAAC
JMFF041B19+ TAACTAATTGCTTTATCACATTTGGTGGGAGATTTTCATTGGTTGCCGCCATAGCCAAAC
JMFF024I24+ TAACTAATTGCTTTATCACATTTGGTGGGAGATTTTCATTGGTTGCCGCCATAGCCAAAC
JMFF028D02+ TAACTAATTGCTTTATCACATTTGGTGGGAGATTTTCATTGGTTGCCGCCATAGCCAAAC
____________________________________________________________
consensus TAACTAATTGCTTTATCACATTTGGTGGGAGATTTTCATTGGTTGCCGCCATAGCCAAAC
. : . : . : . : . : . :
JMFF039D06+ TAATTTAAAAACTGATCCTCGCCTCCCAGGAGAAAATGTTAACTTTGCTGCAGCAAATCA
JMFF041B19+ TAATTTAAAAACTGATCCTCGCCTCCCAGGAGAAAATGTTAACTTTGCTGCAGCAAATCA
JMFF024I24+ TAATTTAAAAACTGATCCTCGCCTCCCAGGAGAAAATGTTAACTTTGCTGCAGCAAATCA
JMFF028D02+ TAATTTAAAAACTGATCCTCGCCTCCCAGGAGAAAATGTTAACTTTGCTGCAGCAAATCA
____________________________________________________________
consensus TAATTTAAAAACTGATCCTCGCCTCCCAGGAGAAAATGTTAACTTTGCTGCAGCAAATCA
. : . : . : . : . : . :
JMFF039D06+ ATAAGGCAGGTAAATGCCAAGCGCCCTCACTGTCAATTAATCAACTCTAAAGACAAACAA
JMFF041B19+ ATAAGGCAGGTAAATGCCAAGCGCCCTCACTGTCAATTAATCAACTCTAAAGACAAACAA
JMFF024I24+ ATAAGGCAGGTAAATGCCAAGCGCCCTCACTGTCAATTAATCAACTCTAAAGACAAACAA
JMFF028D02+ ATAAGGCAGGTAAATGCCAAGCGCCCTCACTGTCAATTAATCAACTCTAAAGACAAACAA
____________________________________________________________
consensus ATAAGGCAGGTAAATGCCAAGCGCCCTCACTGTCAATTAATCAACTCTAAAGACAAACAA
. : . : . : . : . : . :
JMFF039D06+ CCCT
JMFF041B19+ CCCTTTTTTTCGCCGTCGGGGAGAAAACGTGCGGCAAAAAGAAAGAGGAACCGATTATAG
JMFF024I24+ CCCTTTTTTTCGCCGTCGGGGAGAAAACGTGCGGCAAAAAGAAAGAGGAACCGATTATAG
JMFF028D02+ CCCTTTTTTTCGCCGTCGGGGAGAAAACGTGCGGCAAAAAGAAAGAGGAACCGATTATAG
____________________________________________________________
consensus CCCTTTTTTTCGCCGTCGGGGAGAAAACGTGCGGCAAAAAGAAAGAGGAACCGATTATAG
. : . : . : . : . : . :
JMFF041B19+ GGTTCTTGCCTTCTCAATGCCTGCAGAAGCGTACAATGCCCACAAACAGCGGATTCAGTA
JMFF024I24+ GGTTCTTGCCTTCTCAATGCCTGCAGAAGCGTACAATGCCCACAAACAGCGGATTCAGTA
JMFF028D02+ GGTTCTTGCCTTCTCAATGCCTGCAGAAGCGTACAATGCCCACAAACAGCGGATTCAGTA
____________________________________________________________
consensus GGTTCTTGCCTTCTCAATGCCTGCAGAAGCGTACAATGCCCACAAACAGCGGATTCAGTA