| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001N01 | Sequence | 547 | 005991 (8) | gb|KDP34641.1| | 6e-38 | hypothetical protein JCGZ_11985 [Jatropha curcas] | 607 | 005991 (8) | ref|XP_010269986.1| | 4e-48 | PREDICTED: protein LSD1 [Nelumbo nucifera] ref|XP_010269987.1| PREDICTED: protei |
| JMFF019L18 | Sequence | 590 | 005991 (8) | gb|KDP34641.1| | 1e-49 | hypothetical protein JCGZ_11985 [Jatropha curcas] | 753 | 005991 (8) | ref|XP_011028205.1| | 3e-59 | PREDICTED: protein LOL1 [Populus euphratica] ref|XP_011028206.1| PREDICTED: prot |
| JMFF027L15 | Sequence | 585 | 005991 (8) | gb|KDP34641.1| | 2e-45 | hypothetical protein JCGZ_11985 [Jatropha curcas] | 286 | 005991 (8) | |||
| JMFF028L11 | Sequence | 598 | 005991 (8) | gb|KDP34641.1| | 1e-48 | hypothetical protein JCGZ_11985 [Jatropha curcas] | 415 | 005991 (8) | ref|XP_009590862.1| | 8e-04 | PREDICTED: protein LOL1 isoform X1 [Nicotiana tomentosiformis] ref|XP_009590863. |
This contig is upended
. : . : . : . : . : . :
rJMFF019L18- ACTCGTGACATTAATTCATGTACAAGAGTCATGTTTTA
____________________________________________________________
consensus ACTCGTGACATTAATTCATGTACAAGAGTCATGTTTTA
. : . : . : . : . : . :
rJMFF028L11- ATGTCACTATTCATTACATCAAGTGTAAACACAA
rJMFF027L15- CAA
rJMFF019L18- CCCACTTAGCCACCCTGGTGTCTTCAATGTCACTATTCATTACATCAAGTGTAAACACAA
____________________________________________________________
consensus CCCACTTAGCCACCCTGGTGTCTTCAATGTCACTATTCATTACATCAAGTGTAAACACAA
. : . : . : . : . : . :
rJMFF001N01- CCTTGTAGAGGAAGTAGATGAGAGCATTTCATGTTACTCTC
rJMFF028L11- TAAATGTACTGCAACTATACCTTGTAGAGGAAGTAGATGAGAGCATTTCATGTTACTCTC
rJMFF027L15- TAAATGTACTGCAANTATNCCTTGTAGAGGAAGNAGATGAGAGCATTTCATGTTACTCTC
rJMFF019L18- TAAATGTACTGCAACTATACCTTGTAGAGGAAGTAGATGAGAGCATTTCATGTTACTCTC
____________________________________________________________
consensus TAAATGTACTGCAACTATACCTTGTAGAGGAAGTAGATGAGAGCATTTCATGTTACTCTC
. : . : . : . : . : . :
rJMFF001N01- CAACCAGAAAACACCCATTAATTAATTAGTCGCAGCTCCAACCCAGAAAAAACTGCTTAT
rJMFF028L11- CAACCAGAAAACACCCATTAATTAATTAGTCGCAGCTCCAACCCANAAAAAACTGCTTAT
rJMFF027L15- CAACCAGAAAACTCCCATTANTTAATTAGTCGCAGCTCCAACCCANAAAAAACTGCTTAT
rJMFF019L18- CAACCAGAAAACACCCATTAATTAATTAGTCGCAGCTCCAACCCAGAAAAAACTGCTTAT
____________________________________________________________
consensus CAACCAGAAAACACCCATTAATTAATTAGTCGCAGCTCCAACCCAGAAAAAACTGCTTAT
. : . : . : . : . : . :
rJMFF001N01- TCATATTACATTCACGCATGGGAAAATTANCTAAGCTCTATACATGTAACAACCACATTA
rJMFF028L11- TCATATTACATTCACGCATGGGAAAATTAGCTAAGCTCTATACATGTAACAACCACATTA
rJMFF027L15- TCATATTACATTCACGCATGGNAAAATTAGCTAAGCTCTATACNTGTAACAACCACATTA
rJMFF019L18- TCATATTACATTCACGCATGGGAAAATTAGCTAAGCTCTATACATGTAACAACCACATTA
____________________________________________________________
consensus TCATATTACATTCACGCATGGGAAAATTAGCTAAGCTCTATACATGTAACAACCACATTA
. : . : . : . : . : . :
rJMFF001N01- TTATTCCTCTTCTGATCTGCCTGTCCAGGCCACATATATATCCTTTCATAACATGCATGG
rJMFF028L11- TTATTCCTCTTCTGATCTGCCTGTCCAGGCCACATATATATCCTTTCATAACATGCATGG
rJMFF027L15- TTATTCCTCTTCTGATCTGACTGTCCAGGCCACNTATATATCCTTTCATAACATGCATGG
rJMFF019L18- TTATTCCTCTTCTGATCTGCCTGTCCAGGCCACATATATATCCTTTCATAACATGCATGG
____________________________________________________________
consensus TTATTCCTCTTCTGATCTGCCTGTCCAGGCCACATATATATCCTTTCATAACATGCATGG
. : . : . : . : . : . :
rJMFF001N01- AAACCTTCTACCTTCACTCTTTCACTCTTCANCTANCTAGCTAGCTCTTCAACTTCTGTT
rJMFF028L11- AAACCTTCTACCTTCACTCTTTCACTCTTCANCTANCTAGCTAGCTCTTCAACTTCTGTT
rJMFF027L15- AAACCTTCTACCTTCACTCTTTCNCTCTTC
rJMFF019L18- AAACCTTCTACCTTCACTCTTTCACTCTTCAGCTAGCTAGCTAGCTCTTCAACTTCTGTT
____________________________________________________________
consensus AAACCTTCTACCTTCACTCTTTCACTCTTCAGCTAGCTAGCTAGCTCTTCAACTTCTGTT
. : . : . : . : . : . :
rJMFF001N01- CGTTCATGTTCGGTGAAACCCCTACTGGTGTCAAAAAGTTGCANACTGCACATTTGACAG
rJMFF028L11- CGTNCATGTTCGGTGAAACCCCTACTGGTGTCAAAAAGTTGCAGACTGCACATTTGACAG
rJMFF019L18- CGTTCATGTTCGGTGAAACCCCTACTGGTGTCAAAAAGTTGCAGACTGCACATTTGACAG
____________________________________________________________
consensus CGTTCATGTTCGGTGAAACCCCTACTGGTGTCAAAAAGTTGCAGACTGCACATTTGACAG
. : . : . : . : . : . :
rJMFF001N01- ATCTTGCCCCATATTGGTACATCAATAGCATTCTACAGTTGCCACAGTTCACATGTGCCA
rJMFF028L11- ATCTTGCCCC
rJMFF019L18- ATCTTGCCCCATATTGGTACATCAATAGCATTCTACAGTTGCCACAGTTCACATGTGCCA
JMFF001N01+ GCCACAGTTCACATGTGCCA
JMFF019L18+ TCTTGCCCCATATTGGTACATCAATAGCATTCTACAGTTGCCACAGTTCACATGTGCCA
JMFF028L11+ CTTGCCCCATATTGGTACATCAATAGCATTCTACAGTTGCCACAGTTCACATGTGCCA
JMFF027L15+ GGTACATCAATAGCATTCTACAGTTGCCACAGTTCACATGTGCCA
____________________________________________________________
consensus ATCTTGCCCCATATTGGTACATCAATAGCATTCTACAGTTGCCACAGTTCACATGTGCCA
. : . : . : . : . : . :
rJMFF001N01- CCTGATTTGCTTCCAAAGCTAAATTGATGGNGTGGCAACATGAGCACTGAACGCTTGTTG
rJMFF019L18- CCTGATTTGCTTCCAAAGCTAAATTGATGGTGTGGCAACATGAGCACTGAACGCTTGTTG
JMFF001N01+ CCTGATTTGCTTCCAAAGCTAAATTGATGGTGTGGCAACATGAGCACTGAACGCTTGTTG
JMFF019L18+ CCTGATTTGCTTCCAAAGCTAAATTGATGGTGTGGCAACATGAGCACTGAACGCTTGTTG
JMFF028L11+ CCTGATTTGCTTCCAAAGCTAAATTGATGGTGTGGCAACATGAGCACTGAACGCTTGTTG
JMFF027L15+ CCTGATTTGCTTCCAAAGCTAAATTGATGGTGTGGCAACATGAGCACTGAACGCTTGTTG
____________________________________________________________
consensus CCTGATTTGCTTCCAAAGCTAAATTGATGGTGTGGCAACATGAGCACTGAACGCTTGTTG
. : . : . : . : . : . :
rJMFF001N01- CTCCACGAATATACATTAGCAATGTGTGGCACCCACCACAGATTAGCTGAGCCATTTCAG
rJMFF019L18- CTCCACGAATATACATTAGCAATGTGTGGCACCCACCACAGATTAGCTGAGCCATTTCAG
JMFF001N01+ CTCCACGAATATACATTAGCAATGTGTGGCACCCACCACAGATTAGCTGAGCCATTTCAG
JMFF019L18+ CTCCACGAATATACATTAGCAATGTGTGGCACCCACCACAGATTAGCTGAGCCATTTCAG
JMFF028L11+ CTCCACGAATATACATTAGCAATGTGTGGCACCCACCACAGATTAGCTGAGCCATTTCAG
JMFF027L15+ CTCCACGAATATACATTAGCAATGTGTGGCACCCACCACAGATTAGCTGAGCCATTTCAG
____________________________________________________________
consensus CTCCACGAATATACATTAGCAATGTGTGGCACCCACCACAGATTAGCTGAGCCATTTCAG
. : . : . : . : . : . :
rJMFF001N01- TGCCTGGNGGAGGTACTGCAGNTACTGCACTGCATACTGCACAGCATACTGAGGTTGCTC
rJMFF019L18- TGCCTGGTGGANGTACTGCAGTTACTGCACTGCATACTGCACAGCATACTGAGGTTGCTC
JMFF001N01+ TGCCTGGTGGAGGTACTGCAGTTACTGCACTGCATACTGCACAGCATACTGAGGTTGCTC
JMFF019L18+ TGCCTGGTGGAGGTACTGCAGTTACTGCACTGCATACTGCACAGCATACTGAGGTTGCTC
JMFF028L11+ TGCCTGGTGGAGGTACTGCAGTTACTGCACTGCATACTGCACAGCATACTGAGGTTGCTC
JMFF027L15+ TGCCTGGTGGAGGTACTGCAGTTACTGCACTGCATACTGCACAGCATACTGAGGTTGCTC
____________________________________________________________
consensus TGCCTGGTGGAGGTACTGCAGTTACTGCACTGCATACTGCACAGCATACTGAGGTTGCTC
. : . : . : . : . : . :
rJMFF001N01- CNACTGGATACATTA
rJMFF019L18- CAACTGGATACATTAAAAGGTTTCGACACCCAGAACACACAAGCTGGCTTTGTGC
JMFF001N01+ CAACTGGATACATTAAAAGGTTTCGACACCTAGAACACACAAGCTGGCTTTGTGCACCAT
JMFF019L18+ CAACTGGATACATTAAAAGGTTTCGACACCCAGAACACACAAGCTGGCTTTGTGCACCAT
JMFF028L11+ CAACTGGATACATTAAAAGGTTTCGACACCCAGAACACACAAGCTGGCTTTGTGCACCAT
JMFF027L15+ CAACTGGATACATTAAAAGGTTTCGACACCCAGAACACACAAGCTGGCTTTGTGCACCAT
____________________________________________________________
consensus CAACTGGATACATTAAAAGGTTTCGACACCCAGAACACACAAGCTGGCTTTGTGCACCAT
. : . : . : . : . : . :
JMFF001N01+ TAGGTGCAGGAGACATAAGTGGTGATGGAGCTGGAGCTGTTGGATATGGAGCAAGAGGAA
JMFF019L18+ TAGGTGCAGGAGACATAAGTGGTGATGGAGCTGGAGCTGTTGGATATGGAGCAAGAGGAA
JMFF028L11+ TAGGTGCAGGAGACATAAGTGGTGATGGAGCTGGAGCTGTTGGATATGGAGCAAGAGGAA
JMFF027L15+ TAGGTGCAGGAGACATAAGTGGTGATGGAGCTGGAGCTGTTGGATATGGAGCAAGAGGAA
____________________________________________________________
consensus TAGGTGCAGGAGACATAAGTGGTGATGGAGCTGGAGCTGTTGGATATGGAGCAAGAGGAA
. : . : . : . : . : . :
JMFF001N01+ CAGGCATGATGGTGGATCTGAAAAATGGTAGCCCTTTTCTAACTCCTAAGTGCAAGCTAC
JMFF019L18+ CAGGCATGATGGTGGATCTGAAAAATGGTAGCCCTTTTCTAACTCCTAAGTGCAAGCTAC
JMFF028L11+ CAGGCATGATGGTGGATCTGAAAAATGGTAGCCCTTTTCTAACTCCTAAGTGCAAGCTAC
JMFF027L15+ CAGGCATGATGGTGGATCTGAAAAATGGTAGCCCTTTTCTAACTCCTAAGTGCAAGCTAC
____________________________________________________________
consensus CAGGCATGATGGTGGATCTGAAAAATGGTAGCCCTTTTCTAACTCCTAAGTGCAAGCTAC
. : . : . : . : . : . :
JMFF001N01+ TTCAGAGACATGAAACATAGTACCTATCATCTTCACTTTGCCATGGGTATTGCTTGATGC
JMFF019L18+ TTCAGAGACATGAAACATAGTACCTATCATCTTCACTTTGCCATGGGTATTGCTTGATGC
JMFF028L11+ TTCAGAGACATGAAACATAGTACCTATCATCTTCACTTTGCCATGGGTATTGCTTGATGC
JMFF027L15+ TTCAGAGACATGAAACATAGTACCTATCATCTTCACTTTGCCATGGGTATTGCTTGATGC
____________________________________________________________
consensus TTCAGAGACATGAAACATAGTACCTATCATCTTCACTTTGCCATGGGTATTGCTTGATGC
. : . : . : . : . : . :
JMFF001N01+ ATTGAAGAATATAGGAATTTAGTTGAGCATTTAGGAGGAGAGAGTGAGACACACTCCTTT
JMFF019L18+ ATTGAAGAATATAGGAATTTAGTTGAGCATTTAGGAGGAGAGAGTGAGACACACTCCTTT
JMFF028L11+ ATTGAAGAATATAGGAATTTAGTTGAGCATTTAGGAGGAGAGAGTGAGACACACTCCTTT
JMFF027L15+ ATTGAAGAATATAGGAATTTAGTTGAGCATTTAGGAGGAGAGAGTGAGACACACTCCTTT
____________________________________________________________
consensus ATTGAAGAATATAGGAATTTAGTTGAGCATTTAGGAGGAGAGAGTGAGACACACTCCTTT
. : . : . : . : . : . :
JMFF001N01+ AGAGTGTGGAGGATGAAGGAAAAATTTCTCCAAAAACTCTTGAAAAT
JMFF019L18+ AGAGTGTGGAGGATGAAGGAAAAATTTCTCCAAAAACTCTTGAAAAT
JMFF028L11+ AGAGTGTGGAGGATGAAGGAAAAATTTCTCCAAAAACTCTTGAAAATGTTCAAAGATACT
JMFF027L15+ AGAGTGTGGAGGATGAAGGAAAAATTTCTCCAAAAACTCTTGAAAATGTTCAAAGATACT
____________________________________________________________
consensus AGAGTGTGGAGGATGAAGGAAAAATTTCTCCAAAAACTCTTGAAAATGTTCAAAGATACT