Contig 005988:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003J09Sequence577005988 (5)ref|XP_011078239.1|6e-78PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Sesamum indicum]742005332 (6)ref|XP_009776400.1|1e-47PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Nicotiana sylvestris]
JMFF027G07Sequence537005988 (5)emb|CDP03239.1|1e-41unnamed protein product [Coffea canephora]713005332 (6)ref|XP_009776400.1|9e-46PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Nicotiana sylvestris]
JMSF023K06Sequence677005988 (5)ref|XP_011078239.1|6e-77PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Sesamum indicum]757005332 (6)ref|XP_009628676.1|2e-81PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Nicotiana tomentosiformis]
JMSF034J16Sequence667005988 (5)emb|CDP03239.1|9e-101unnamed protein product [Coffea canephora]714005332 (6)ref|XP_009776400.1|3e-54PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Nicotiana sylvestris]
JMSF045C17Sequence751005988 (5)emb|CDP03239.1|3e-129unnamed protein product [Coffea canephora]741005332 (6)ref|XP_009628676.1|2e-59PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF045C17+ GGATGACTCAAATAGAGCATAGT
                      ____________________________________________________________
consensus GGATGACTCAAATAGAGCATAGT
 
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JMSF045C17+ CTAGGGAGACATTGGTCGAGGAATCTCTATACGCATAGTATGGATATATGTTAACCAAGA
                      ____________________________________________________________
consensus CTAGGGAGACATTGGTCGAGGAATCTCTATACGCATAGTATGGATATATGTTAACCAAGA
 
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JMSF045C17+ AAGGCGACCGGTTTTCAGCAAGGAATTCCAACAAGGGTTTCAGGAAATAAGCATGGCTAC
JMSF034J16+ CAGGAAATAAGCATGGCTAC
                      ____________________________________________________________
consensus AAGGCGACCGGTTTTCAGCAAGGAATTCCAACAAGGGTTTCAGGAAATAAGCATGGCTAC
 
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JMSF045C17+ TATTAAAAGCCCCGGCAGAAGGCGGGAACGATCGAGATAAAACGCCCAAGGAATGCGTAG
JMSF034J16+ TATTAAAAGCCCCGGCAGAAGGCGGGAACGATCGAGATAAAACGCCCAAGGAATGCGTAG
                      ____________________________________________________________
consensus TATTAAAAGCCCCGGCAGAAGGCGGGAACGATCGAGATAAAACGCCCAAGGAATGCGTAG
 
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JMSF045C17+ TCGAAACCTTGATCCTCTTGTGGAGACCGGCTTTTCGTAGAGATGTGAATACGTTCTTCA
JMSF034J16+ TCGAAACCTTGATCCTCTTGTGGAGACCGGCTTTTCGTAGAGATGTGAATACGTTCTTCA
JMFF003J09+ GGAGACCGGCTTTTCGTAGAGATGTGAATACGTTCTTCA
JMSF023K06+ GGAGACCGGCTTTTCGTAGAGATGTGAATACGTTCTTCA
                      ____________________________________________________________
consensus TCGAAACCTTGATCCTCTTGTGGAGACCGGCTTTTCGTAGAGATGTGAATACGTTCTTCA
 
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JMSF045C17+ TTGCGGGTACTACCATGGCAGATACATTGCTTGAGGCTTCTGTGACTTCAGCACCGACGG
JMSF034J16+ TTGCGGGTACTACCATGGCAGATACATTGCTTGAGGCTTCTGTGACTTCAGCACCGACGG
JMFF003J09+ TTGCGGGTACTACCATGGCAGATACATTGCTTGAGGCTTCTGTGACTTCAGCATCGACGG
JMSF023K06+ TTGCGGGTACTACCATGGCAGATACATTGCTTGAGGCTTCTGTGACTTCAGCACCGACGG
                      ____________________________________________________________
consensus TTGCGGGTACTACCATGGCAGATACATTGCTTGAGGCTTCTGTGACTTCAGCACCGACGG
 
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JMSF045C17+ TTATAGAAGTGATTTTCGTCGCGGGGTAGTATGGAAGGATGCTGTTCTTCAACCACGTAT
JMSF034J16+ TTATAGAAGTGATTTTCGTCGCGGGGTAGTATGGAAGGATGCTGTTCTTCAACCACGTAT
JMFF003J09+ TTATAGAAGTGATTTTCGTCGCGGGGTAGTATGGAAGGATGCTGTTCTTCAACCACGTAT
JMSF023K06+ TTATAGAAGTGATTTTCGTCGCGGGGTAGTATGGAAGGATGCTGTTCTTCAACCACGTAT
                      ____________________________________________________________
consensus TTATAGAAGTGATTTTCGTCGCGGGGTAGTATGGAAGGATGCTGTTCTTCAACCACGTAT
 
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JMSF045C17+ CGGCATTGGATTGGAATTGGGAAAACGGTAACAAGTCCGAATTTGGAATTCCGATCATGA
JMSF034J16+ CGGCATTGGATTGGAATTGGGAAAACGGTAACAAGTCCGAATTTGGAATTCCGATCATGA
JMFF003J09+ CGGCATTGGATTGGAATTGGGAAAACGGTAACAAGTCCGAATTTGGAATTCCGATCATGA
JMSF023K06+ CGGCATTGGATTGGAATTGGGAAAACGGTAACAAGTCCGAATTTGGAATTCCGATCATGA
JMFF027G07+ CATTGGATTGGAATTGGGAAAACGGTAACAAGTCCGAATTTGGAATTCCGATCATGA
                      ____________________________________________________________
consensus CGGCATTGGATTGGAATTGGGAAAACGGTAACAAGTCCGAATTTGGAATTCCGATCATGA
 
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JMSF045C17+ GCTCAATTCCAGTATTCGCAAACGCCTTGAGAACTTGGATGTTCGAATCATATATCCTCA
JMSF034J16+ GCTCAATTCCAGTATTCGCAAACGCCTTGAGAACTTGGATGTTCGAATCATATATCCTCA
JMFF003J09+ GCTCAATTCCAGTATTCGCAAACGCCTTGAGAACTTGGATGTTCGAATCATATATCCTCA
JMSF023K06+ GCTCAATTCCAGTATTCGCAAACGCCTTGAGAACTTGGATGTTCGAATCATATATCCTCA
JMFF027G07+ GCTCAATTCCAGTATTCGCAAACGCCTTGAGAACTTGGATGTTCGAATCATATATCCTCA
                      ____________________________________________________________
consensus GCTCAATTCCAGTATTCGCAAACGCCTTGAGAACTTGGATGTTCGAATCATATATCCTCA
 
. : . : . : . : . : . :
JMSF045C17+ CATACTTAATATTGTGTTGTTGGATAAGCTGTACCGCTTTATCCGGGGTGGGAAGATCGT
JMSF034J16+ CATACTTAATATTGTGTTGTTGGATAAGCTGTACCGCTTTATCCGGGGTGGGAAGATCGT
JMFF003J09+ CATACTTAATATTGTGTTGTTGGATAAGCTGTACCGCTTTATCCGGGGTGGGAAGATCGT
JMSF023K06+ CATACTTAATATTGTGTTGTTGGATAAGCTGTACCGCTTTATCCGGGGTGGGAAGATCGT
JMFF027G07+ CATACTTAATATTGTGTTGTTGGATAAGCTGTACCGCTTTATCCGGGGTGGGAAGATCGT
                      ____________________________________________________________
consensus CATACTTAATATTGTGTTGTTGGATAAGCTGTACCGCTTTATCCGGGGTGGGAAGATCGT
 
. : . : . : . : . : . :
JMSF045C17+ CCGCATTCCTTCCATAGCAGACTCCAATTTTGCTTCCTCTGCAGATACCCAGAAGCAGCA
JMSF034J16+ CCGCATTCCTTCCATAGCAGACTCCAATTTTGCTTCCTCTGCAGATACCCAGAAGCAGCA
JMFF003J09+ CCGCATTCCTTCCATAGCAGACTCCAATTTTGCTTCCTCTGCAGATACCCAGAAGCAGCA
JMSF023K06+ CCGCATTCCTTCCATAGCAGACTCCAATTTTGCTTCCTCTGCAGATACCCAGAAGCAGCA
JMFF027G07+ CCGCATTCCTTCCATAGCAGACTCCAATTTTGCTTCCTCTGCAGATACCCAGAAGCAGCA
                      ____________________________________________________________
consensus CCGCATTCCTTCCATAGCAGACTCCAATTTTGCTTCCTCTGCAGATACCCAGAAGCAGCA
 
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JMSF045C17+ AGAGCAAAGAACATGCAAAGATGAGTCTGAACCACATTCCCATTTCTTCTTCTTCTTCTT
JMSF034J16+ AGAGCAAAGAACATGCAAAGATGAGTCTGAACCACATTCCCATTTCTTCTTCTTCTTCTT
JMFF003J09+ AGAGCAAAGAACATGCAAAGATGAGTCTGAACCACATTCCCATTTCTTCTTCTTCTTCTT
JMSF023K06+ AGAGCAAAGAACATGCAAAGATGAGTCTGAACCACATTCCCATTTCTTCTTCTTCTTCTT
JMFF027G07+ AGAGCAAAGAACATGCAAAGATGAGTCTGAACCACATTCCCATTTCTTCTTCTTCTTCTT
                      ____________________________________________________________
consensus AGAGCAAAGAACATGCAAAGATGAGTCTGAACCACATTCCCATTTCTTCTTCTTCTTCTT
 
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JMSF045C17+ AAGTGCTTCTCCTTCACCCCCACTCTCTCTCTCTCTCTCTCTCCTCACTTCACTGTGTTT
JMSF034J16+ AAGTGCTTCTCCTTCACCCCCACTCTCTCTCTCTCTCTCTCTCCTCACTTCACTGTGTTT
JMFF003J09+ AAGTGCTTCTCCTTCACCCCCACTCTCTCTCTCTCTCTCTCTCCTCACTTCACTGTGTTT
JMSF023K06+ AAGTGCTTCTCCTTCACCCCCACTCTCTCTCTCTCTCTCTCTCCTCACTTCACTGTGTTT
JMFF027G07+ AAGTGCTTCTCCTTCACCCCCACTCTCTCTCTCTCTCTCTCTCCTCACTTCACTGTGTTT
                      ____________________________________________________________
consensus AAGTGCTTCTCCTTCACCCCCACTCTCTCTCTCTCTCTCTCTCCTCACTTCACTGTGTTT
 
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JMSF045C17+ CTTTCTT
JMSF034J16+ CTTTCTTGTTTACTGGCTTCTGCTGATGCTTTTGTTTTGTAACGTT
JMFF003J09+ CTTTCTTGTTTACTGGCTTCTGCTGATGCTTTTGTTTTGTAACGTTGGTATTTTT
JMSF023K06+ CTTTCTTGTTTACTGGCTTCTGCTGATGCTTTTGTTTTGTAACGTTGGTATTTTTGTTCT
JMFF027G07+ CTTTCTTGTTTACTGGCTTCTGCTGATGCTTTTGTTTTGTAACGTTGGTATTTTTGTTCT
                      ____________________________________________________________
consensus CTTTCTTGTTTACTGGCTTCTGCTGATGCTTTTGTTTTGTAACGTTGGTATTTTTGTTCT
 
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JMSF023K06+ TGTTTTTGAGGATCAGAAGACTATAACGTCTCTCTGTACGGTAAAGGAGGGGGTGTCGGA
JMFF027G07+ TGTTTTTGAGGATCAGAAGACTATAACGTCTCTCTGTACGGTAAAGGAGGGGGTGTCGGA
                      ____________________________________________________________
consensus TGTTTTTGAGGATCAGAAGACTATAACGTCTCTCTGTACGGTAAAGGAGGGGGTGTCGGA
 
. : . : . : . : . : . :
JMSF023K06+ GCTCGAGAGGAATAGTGACACGAGTGGGGGCTATGCT
JMFF027G07+ GCTCGAGAGGAATAGTGACACGAGTGGGGGCTATGCTGAGTGCTGAGGCGTGACGAGTTT
                      ____________________________________________________________
consensus GCTCGAGAGGAATAGTGACACGAGTGGGGGCTATGCTGAGTGCTGAGGCGTGACGAGTTT