Contig 005971:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013D07+                                                  CTCGTCGTACGCGGCGATTGC
                      ____________________________________________________________
consensus                                                    CTCGTCGTACGCGGCGATTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013D07+           GACGCCGATTGAGATAGAGACCATGTTAGCCATGGTGGAGGGGTTATAGGCGTCTTTCTT
                      ____________________________________________________________
consensus             GACGCCGATTGAGATAGAGACCATGTTAGCCATGGTGGAGGGGTTATAGGCGTCTTTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013D07+           GAAGAGGATTCCGATGGAGTAAACGGCGACGGGCATGAGGGCCTTGAGCATCTGGATGAA
                      ____________________________________________________________
consensus             GAAGAGGATTCCGATGGAGTAAACGGCGACGGGCATGAGGGCCTTGAGCATCTGGATGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013D07+           GGAGACGGAGAGGTAGATGTAGGCGGAGTTGGAGAACCAGAGGGAGAGGGAGTAGAGGGC
                      ____________________________________________________________
consensus             GGAGACGGAGAGGTAGATGTAGGCGGAGTTGGAGAACCAGAGGGAGAGGGAGTAGAGGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013D07+           GCCGATGGGGATGATGCACGTGAGGTACACGTGACGGGAGAGAGGCGTGGACGGCGGGTC
                      ____________________________________________________________
consensus             GCCGATGGGGATGATGCACGTGAGGTACACGTGACGGGAGAGAGGCGTGGACGGCGGGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013D07+           CACCAGGCGGGCGACTCGGACGAGGAAGAAGGCGACGGAGGAGCAGAAGGCCATGTGGAT
JMFF006M22+                                                                     AT
JMFF023K07+                                                                     AT
                      ____________________________________________________________
consensus             CACCAGGCGGGCGACTCGGACGAGGAAGAAGGCGACGGAGGAGCAGAAGGCCATGTGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013D07+           CATGGTGAGGGAGATTGGGAAGGGCCAGTTGTAGAGCTTCTTGTCCAGGATGTACTTGTT
JMFF006M22+           CATGGTGAGGGAGATTGGGAAGGGCCAGTTGTAGAGCTTCTTGTCCAGGATGTACTTGTT
JMFF023K07+           CATGGTGAGGGAGATTGGGAAGGGCCAGTTGTAGAGCTTCTTGTCCAGGATGTACTTGTT
                      ____________________________________________________________
consensus             CATGGTGAGGGAGATTGGGAAGGGCCAGTTGTAGAGCTTCTTGTCCAGGATGTACTTGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013D07+           GTAGACGATGACGGTGAAGGAGAGGAAGATCCA                           
JMFF006M22+           GTAGACGATGACGGTGAAGGAGAGGAAGATCCACACCGCCACGTAGGCGTAGGAGAGGAT
JMFF023K07+           GTAGACGATGACGGTGAAGGAGAGGAAGATCCACACCGCCACGTAGGCGTAGGAGAGGAT
                      ____________________________________________________________
consensus             GTAGACGATGACGGTGAAGGAGAGGAAGATCCACACCGCCACGTAGGCGTAGGAGAGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006M22+           GATCTTCTTGATTACGCCGTCGGAGAGTGCGCCGCCTTTCCCCATTGTGCCGGTGGCCGT
JMFF023K07+           GATCTTCTTGATTACGCCGTCGGAGAGTGCGCCGCCTTTCCCCATTGTGCCGGTGGCCGT
                      ____________________________________________________________
consensus             GATCTTCTTGATTACGCCGTCGGAGAGTGCGCCGCCTTTCCCCATTGTGCCGGTGGCCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006M22+           CCCGCTCCCTTTTGACCACGTTTCCACAATCAGCTGCGCGTTCCACCCCGCCGCCATGGC
JMFF023K07+           CCCGCTCCCTTTTGACCACGTTTCCACAATCAGCTGCGCGTTCCACCCCGCCGCCATGGC
                      ____________________________________________________________
consensus             CCCGCTCCCTTTTGACCACGTTTCCACAATCAGCTGCGCGTTCCACCCCGCCGCCATGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006M22+           CGATATCAGCTCCGCTACGCTAGATTCTTCAATCAACTCGCACTGCACCCCACCCCAATC
JMFF023K07+           CGATATCAGCTCCGCTACGCTAGATTCTTCAATCAACTCGCACTGCACCCCACCCCAATC
                      ____________________________________________________________
consensus             CGATATCAGCTCCGCTACGCTAGATTCTTCAATCAACTCGCACTGCACCCCACCCCAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006M22+           AACAGATTAAACCCCGAAAAACAAAGGGTAGTCCACAAAAAAATGAATCATTTTCACGAT
JMFF023K07+           AACAGATTAAACCCCGAAAAACAAAGGGTAGTCCACAAAAAAATGAATCATTTTCACGAT
                      ____________________________________________________________
consensus             AACAGATTAAACCCCGAAAAACAAAGGGTAGTCCACAAAAAAATGAATCATTTTCACGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006M22+           TTCTTACCGATTTCACAGTATCGATATAGGCCTTTGAGGCTTTCTCCGGCGACCAAAGCC
JMFF023K07+           TTCTTACCGATTTCACAGTATCGATATAGGCCTTTGAGGCTTTCTCCGGCGACCAAAGCC
                      ____________________________________________________________
consensus             TTCTTACCGATTTCACAGTATCGATATAGGCCTTTGAGGCTTTCTCCGGCGACCAAAGCC