Contig 005963:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF012A18+                                                              CCCCAGCAC
JMFF020P23+                                                 AATCCCTTCACCACCCCAGCAC
                      ____________________________________________________________
consensus                                                   AATCCCTTCACCACCCCAGCAC
 
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JMFF012A18+           CACAGATGGCTCCAAGGCACTGCATCACCATGTAGAAGAGAGCCCTAGTCAAGGACAGTT
JMFF020P23+           CACAGATGGCTCCAAGGCACTGCATCACCATGTAGAAGAGAGCCCTAGTCAAGGACAGTT
                      ____________________________________________________________
consensus             CACAGATGGCTCCAAGGCACTGCATCACCATGTAGAAGAGAGCCCTAGTCAAGGACAGTT
 
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JMFF012A18+           TCCTTGCCAAGAACAACCCAAAGGTCACTGCTGGGTTGATGTGCCCTCCTGAGATACCAG
JMFF020P23+           TCCTTGCCAAGAACAACCCAAAGGTCACTGCTGGGTTGATGTGCCCTCCTGAGATACCAG
                      ____________________________________________________________
consensus             TCCTTGCCAAGAACAACCCAAAGGTCACTGCTGGGTTGATGTGCCCTCCTGAGATACCAG
 
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JMFF012A18+           CAGTGCAGTAGACAAGGGCAAAGATCATCCCACCAAAAGCCCAAGCAATACCCTGAATAC
JMFF020P23+           CAGTGCAGTAGACAAGGGCAAAGATCATCCCACCAAAAGCCCAAGCAATACCCTGAATAC
                      ____________________________________________________________
consensus             CAGTGCAGTAGACAAGGGCAAAGATCATCCCACCAAAAGCCCAAGCAATACCCTGAATAC
 
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JMFF012A18+           CCACAGACTTGCAGATCCCATCAGACCTCTTCACACCCATAACAGTCAAGATGGTGATGT
JMFF020P23+           CCACAGACTTGCAGATCCCATCAGACCTCTTCACACCCATAACAGTCAAGATGGTGATGT
                      ____________________________________________________________
consensus             CCACAGACTTGCAGATCCCATCAGACCTCTTCACACCCATAACAGTCAAGATGGTGATGT
 
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JMFF012A18+           AGAGGAACAAGAAGGTGGCCACAAACTCAGCAATCCCAGCTCTGTAGAAGGACCATGAGG
JMFF020P23+           AGAGGAACAAGAAGGTGGCCACAAACTCAGCAATCCCAGCTCTGTAGAAGGACCATGAGG
                      ____________________________________________________________
consensus             AGAGGAACAAGAAGGTGGCCACAAACTCAGCAATCCCAGCTCTGTAGAAGGACCATGAGG
 
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JMFF012A18+           TGGCTCCTTGTAGTCCTTGTCTGTCTGAGCTGCTGTGCCCAGTGGTTGGGTCTCCCTGAA
JMFF020P23+           TGGCTCCTTGTAGTCCTTGTCTGTCTGAGCTGCTGTGCCCAGTGGTTGGGTCTCCCTGAA
                      ____________________________________________________________
consensus             TGGCTCCTTGTAGTCCTTGTCTGTCTGAGCTGCTGTGCCCAGTGGTTGGGTCTCCCTGAA
 
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JMFF012A18+           CTTGTTGGCTCCAAGCTTAACATCCTCTTCCTTGCTCTCTGCCATTTTTTCCCCTCACTC
JMFF020P23+           CTTGTTGGCTCCAAGCTTAACATCCTCTTCCTTGCTCTCTGCCATTTTTTCCCCTCACTC
                      ____________________________________________________________
consensus             CTTGTTGGCTCCAAGCTTAACATCCTCTTCCTTGCTCTCTGCCATTTTTTCCCCTCACTC
 
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JMFF012A18+           TCTTCTTGACCTCTTTCTCTCTCTCAACACTATGAAAAAGTAAAGGTGGTGAGTATTGGT
JMFF020P23+           TCTTCTTGACCTCTTTCTCTCTCTCAACACTATGAAAAAGTAAAGGTGGTGAGTATTGGT
                      ____________________________________________________________
consensus             TCTTCTTGACCTCTTTCTCTCTCTCAACACTATGAAAAAGTAAAGGTGGTGAGTATTGGT