clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF001G09 | Sequence | 502 | 005941 (5) | ref|XP_009604184.1| | 92.8 | PREDICTED: uncharacterized protein LOC104099022 [Nicotiana tomentosiformis] | 650 | 005941 (5) | ref|XP_009604184.1| | 92.4 | PREDICTED: uncharacterized protein LOC104099022 [Nicotiana tomentosiformis] |
JMFF016F19 | Sequence | 493 | 005941 (5) | ref|XP_009604184.1| | 90.1 | PREDICTED: uncharacterized protein LOC104099022 [Nicotiana tomentosiformis] | 665 | 005941 (5) | ref|XP_006361081.1| | 92.4 | PREDICTED: uncharacterized protein LOC102600541 [Solanum tuberosum] |
JMFN030D22 | Sequence | 472 | 005941 (5) | ref|XP_009604184.1| | 89.7 | PREDICTED: uncharacterized protein LOC104099022 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF016F19- TATTATTTATT
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consensus TATTATTTATT
. : . : . : . : . : . :
rJMFF001G09- TACAACACCTAGAATTCATTACAACAAAACTAATTTAGATTTGATAAAAT
rJMFF016F19- TAATTTTACATACAACACCTAGAATTCATTACAACAAAACTAATTTAGATTTGATAAAAT
____________________________________________________________
consensus TAATTTTACATACAACACCTAGAATTCATTACAACAAAACTAATTTAGATTTGATAAAAT
. : . : . : . : . : . :
rJMFF001G09- TGTATTTGCAAAGTTCAACTCTTACTCAAAAGAAAATCTAAGCACTATAAAAACTATTTA
rJMFF016F19- TGTATTTGCAAAGTTCAACTCTTACTCAAAAGAAAATCTAAGCACTATAAAAACTATTTA
____________________________________________________________
consensus TGTATTTGCAAAGTTCAACTCTTACTCAAAAGAAAATCTAAGCACTATAAAAACTATTTA
. : . : . : . : . : . :
rJMFF001G09- ACATGATATGACGCAGTAAGACTTATTTAATTATTACATTGTCAAAATTATACACCCAAT
rJMFF016F19- ACATGATATGACGCAGTAAGACTTATTTAATTATTACATTGTCAAAATTATACACCCAAT
____________________________________________________________
consensus ACATGATATGACGCAGTAAGACTTATTTAATTATTACATTGTCAAAATTATACACCCAAT
. : . : . : . : . : . :
rJMFF001G09- TAACACATGACAAAGTCTTGGAAAACGTTGTTAATTAGTTATTAGGGTATGCCGATGATG
rJMFF016F19- TAACACATGACAAAGTCTTGGAAAACGTTGTTAATTAGTTATTAGGGTATGCCGATGATG
____________________________________________________________
consensus TAACACATGACAAAGTCTTGGAAAACGTTGTTAATTAGTTATTAGGGTATGCCGATGATG
. : . : . : . : . : . :
rJMFF001G09- GGGATGAAGGGCAAGTAGTAATAGCTGGTTGGTGGAAGTCCCCACTCCCTTGGCAGAGGC
rJMFF016F19- GGGATGAAGGGCAAGTAGTAATAGCTGGTTGGTGGAAGTCCCCACTCCCTTGGCAGAGGC
____________________________________________________________
consensus GGGATGAAGGGCAAGTAGTAATAGCTGGTTGGTGGAAGTCCCCACTCCCTTGGCAGAGGC
. : . : . : . : . : . :
rJMFF001G09- AGATCCACTGTCTTTGACCCACCAATACTACCACCCCCACCCCCACCCACACATTTTGCA
rJMFF016F19- AGATCCACTGTCTTTGACCCACCAATACTACCACCCCCACCCCCACCCACACATTTTGCA
JMFN030D22+ CCCCCACCCACACATTTTGCA
JMFF001G09+ CCCCCACCCACACATTTTGCA
JMFF016F19+ CACACATTTTGCA
____________________________________________________________
consensus AGATCCACTGTCTTTGACCCACCAATACTACCACCCCCACCCCCACCCACACATTTTGCA
. : . : . : . : . : . :
rJMFF001G09- TTTGGATACTTTGTGTAAAACCTAAGAGGCTCCGAGGTGGTCATGATGTAGTGGCGGCTG
rJMFF016F19- TTTGGACACTTTGTGTAAAACCTAAGAGGCTCCGAGGTGGTCATGATGTAGTGGCGGCTG
JMFN030D22+ TTTGGACACTTTGTGTAAAACCTAAGAGGCTCCGAGGTGGTCATGATGTAGTGGCGGCTG
JMFF001G09+ TTTGGATACTTTGTGTAAAACCTAAGAGGCTCCGAGGTGGTCATGATGTAGTGGCGGCTG
JMFF016F19+ TTTGGACACTTTGTGTAAAACCTAAGAGGCTCCGAGGTGGTCATGATGTAGTGGCGGCTG
____________________________________________________________
consensus TTTGGACACTTTGTGTAAAACCTAAGAGGCTCCGAGGTGGTCATGATGTAGTGGCGGCTG
. : . : . : . : . : . :
rJMFF001G09- TGGTCGGATTCTCCGGCGGTAGCTCTGACGACAACCTTGGATTCACATGCTTTCATAGGA
rJMFF016F19- TGGTCGGATTCTCCGGCGGCAGCTCTGACGACAACCTTGGATTCACATGCTTTCATAGGA
JMFN030D22+ TGGTCGGATTCTCCGGCGGCAGCTCTGACGACAACCTTGGATTCACATGCTTTGATAGGA
JMFF001G09+ TGGTCGGATTCTCCGGCGGTAGCTCTGACGACAACCTTGGATTCACATGCTTTCATAGGA
JMFF016F19+ TGGTCGGATTCTCCGGCGGCAGCTCTGACGACAACCTTGGATTCACATGCTTTCATAGGA
____________________________________________________________
consensus TGGTCGGATTCTCCGGCGGCAGCTCTGACGACAACCTTGGATTCACATGCTTTCATAGGA
. : . : . : . : . : . :
rJMFF001G09- ATGTAGAGCTGTCGGGTGGCTCCGAGGATCTTGGCGCTGCAGCTGACGACAGAGGATGGG
rJMFF016F19- ATGTAGAGCTGTCGGGTGGCTCCGAGGATCTTGGCGCTGCAGCTGACGACAGAGGATGGG
JMFN030D22+ ATGTAGAGCTGTCGGGTGGCTCCGAGGATCTTGGCGCTGCAGCTGACGACAGAGGATGGG
JMFF001G09+ ATGTAGAGCTGTCGGGTGGCTCCGAGGATCTTGGCGCTGCAGCTGACGACAGAGGATGGG
JMFF016F19+ ATGTAGAGCTGTCGGGTGGCTCCGAGGATCTTGGCGCTGCAGCTGACGACAGAGGATGGG
____________________________________________________________
consensus ATGTAGAGCTGTCGGGTGGCTCCGAGGATCTTGGCGCTGCAGCTGACGACAGAGGATGGG
. : . : . : . : . : . :
rJMFF001G09- GATTTTGAAGAAGGGAGAACCACAGTTGTTTCGAAACTCCCATCTTCTTCTGTTGTCGCC
rJMFF016F19- GATTTTGAAGAAGGGAGAACCACAGTTGTTTCGAAACTCCCATCTTCTTCTGTTGTCGCC
JMFN030D22+ GATTTTGAAGAAGGGAGAACCACAGTTGTTTCGAAACTCCCATCTTCTTCTGTTGTCGCC
JMFF001G09+ GATTTTGAAGAAGGGAGAACCACAGTTGTTTCGAAACTCCCATCTTCTTCTGTTGTCGCC
JMFF016F19+ GATTTTGAAGAAGGGAGAACCACAGTTGTTTCGAAACTCCCATCTTCTTCTGTTGTCGCC
____________________________________________________________
consensus GATTTTGAAGAAGGGAGAACCACAGTTGTTTCGAAACTCCCATCTTCTTCTGTTGTCGCC
. : . : . : . : . : . :
rJMFF001G09- ATGGCCATGTTTTTCTCCCCACCACACTTCACTGACACTTTCACACCTGA
rJMFF016F19- ATGGCCATGTTTTTCTCCCCACCACACTTCACTGACACTTTCACACCTGAGAGA
JMFN030D22+ ATGGCCATGTTTTTCTCCCAACCACACTTCACTGACACTTTCACACCTGAGAGATGTGGA
JMFF001G09+ ATGGCCATGTTTTTCTCCCCACCACACTTCACTGACACTTTCACACCTGAGAGATGTGGA
JMFF016F19+ ATGGCCATGTTTTTCTCCCCACCACACTTCACTGACACTTTCACACCTGAGAGATGTGGA
____________________________________________________________
consensus ATGGCCATGTTTTTCTCCCCACCACACTTCACTGACACTTTCACACCTGAGAGATGTGGA
. : . : . : . : . : . :
JMFN030D22+ GGATGGTTATGGGTATGGGTGCAGTCCAGGCAGGTGACAGAGCCCTTGAAGACATGGGAG
JMFF001G09+ GGATGGTTATGGGTATGGGTGCAGTCCAGGCAGGTGACAGAGCCCTTGAAGACATGGGAG
JMFF016F19+ GGATGGTTATGGGTATGGGTGCAGTCCAGGCAGGTGACAGAGCCCTTGAAGACATGGGAG
____________________________________________________________
consensus GGATGGTTATGGGTATGGGTGCAGTCCAGGCAGGTGACAGAGCCCTTGAAGACATGGGAG
. : . : . : . : . : . :
JMFN030D22+ GCGGAGAGGTCGAAGCTGGCGAGAGCTAACGCGACGGAGAGCAAGATTCCGGCGAGCTGA
JMFF001G09+ GCGGAGAGGTCGAAGCTGGCGAGAGCTAACGCGACGGAGAGCAAGATTCCGGCGAGCTGA
JMFF016F19+ GCGGAGAGGTCGAAGCTGGCGAGAGCTAACGCGACGGAGAGCAAGATTCCGGCGAGCTGA
____________________________________________________________
consensus GCGGAGAGGTCGAAGCTGGCGAGAGCTAACGCGACGGAGAGCAAGATTCCGGCGAGCTGA
. : . : . : . : . : . :
JMFN030D22+ TGACAGGCGGCAGCCATTATATTGTAGATA
JMFF001G09+ TGACAGGCGGCAGCCATTATATTGTAGATAATATGACACCACTTAAATGCAAGACAGAAT
JMFF016F19+ TGACAGGCGGCAGCCATTATATTGTAGATAATATGACACCACTTAAATGCAAGACAGAAT
____________________________________________________________
consensus TGACAGGCGGCAGCCATTATATTGTAGATAATATGACACCACTTAAATGCAAGACAGAAT