clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF008H13 | Sequence | 481 | 005905 (2) | gb|EPS71012.1| | 3e-15 | hypothetical protein M569_03758, partial [Genlisea aurea] | 684 | 002527 (2) | ref|XP_006346683.1| | 3e-23 | PREDICTED: probable serine/threonine-protein kinase WNK5-like [Solanum tuberosu |
JMSF023I03 | Sequence | 642 | 005905 (2) | ref|XP_007033560.1| | 3e-114 | Kinase, putative isoform 2, partial [Theobroma cacao] gb|EOY04486.1| Kinase, put | 736 | 002527 (2) | ref|XP_004246271.1| | 2e-27 | PREDICTED: probable serine/threonine-protein kinase WNK5 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF023I03+ TGTATGGATATTCAGAAGTGAGCATCTCCAATACACACATGCCAAAGGAGTATATG
____________________________________________________________
consensus TGTATGGATATTCAGAAGTGAGCATCTCCAATACACACATGCCAAAGGAGTATATG
. : . : . : . : . : . :
JMSF023I03+ TCAACCAGCTCATCGTACTCCTCCTCGTACAACTCCGGTGCCATGAATTCAGGTGTACCT
____________________________________________________________
consensus TCAACCAGCTCATCGTACTCCTCCTCGTACAACTCCGGTGCCATGAATTCAGGTGTACCT
. : . : . : . : . : . :
JMSF023I03+ ATGACACTATGGGCATGGGATCCACGGAGCATGGCTGCTAAGCCCAAATCGCCGATCTTG
____________________________________________________________
consensus ATGACACTATGGGCATGGGATCCACGGAGCATGGCTGCTAAGCCCAAATCGCCGATCTTG
. : . : . : . : . : . :
JMSF023I03+ ACTTGGCCGAGATGCCCATTCACAAAAATGTTATCACACTTGAGATCGCGGTGGATTACT
____________________________________________________________
consensus ACTTGGCCGAGATGCCCATTCACAAAAATGTTATCACACTTGAGATCGCGGTGGATTACT
. : . : . : . : . : . :
JMSF023I03+ GGGGGATCATGGCTGTGCAAATACGCAAGACCTTCAAGGATTTGGCGCACCCAGTTCTTG
____________________________________________________________
consensus GGGGGATCATGGCTGTGCAAATACGCAAGACCTTCAAGGATTTGGCGCACCCAGTTCTTG
. : . : . : . : . : . :
JMSF023I03+ ATTGCTCGAATGTTCACTGTCGTGTACCTCTGCCTGTACTCTCTGAGCGTGCCGGAAGTG
____________________________________________________________
consensus ATTGCTCGAATGTTCACTGTCGTGTACCTCTGCCTGTACTCTCTGAGCGTGCCGGAAGTG
. : . : . : . : . : . :
JMSF023I03+ AACAACTCGGTGATGAAGTTGAAAGTCCGGCGATCGGTGTCGATCCAGGATGCATGGAAT
____________________________________________________________
consensus AACAACTCGGTGATGAAGTTGAAAGTCCGGCGATCGGTGTCGATCCAGGATGCATGGAAT
. : . : . : . : . : . :
JMSF023I03+ CGCATTATGGAGCTGTGATCAAGGTCCTTGAGGAGGAGGACTTCGGAGTATAGCCTCTGC
____________________________________________________________
consensus CGCATTATGGAGCTGTGATCAAGGTCCTTGAGGAGGAGGACTTCGGAGTATAGCCTCTGC
. : . : . : . : . : . :
JMSF023I03+ AGCTCTTCCGGCGACCGGAAAACATTGTTCAGCTTGATCTGGTTCCAGGCAACCTCCATT
JMFF008H13+ T
____________________________________________________________
consensus AGCTCTTCCGGCGACCGGAAAACATTGTTCAGCTTGATCTGGTTCCAGGCAACCTCCATT
. : . : . : . : . : . :
JMSF023I03+ CCTAGGACTTCATCAAATGCTCTGTAAACTGTCTTTATTGCTCCTTTACCCAGGATGTCC
JMFF008H13+ CCTAGGACTTCATCAAATGCTCTGTAAACTGTCTTTATTGCTCCTTTACCCAGGATGTCC
____________________________________________________________
consensus CCTAGGACTTCATCAAATGCTCTGTAAACTGTCTTTATTGCTCCTTTACCCAGGATGTCC
. : . : . : . : . : . :
JMSF023I03+ CTGAA
JMFF008H13+ CTGAAACGTCCATAGCGTTCCGATGGATCCATCTCCACATATTCCAACTTGGTGGCTCCG
____________________________________________________________
consensus CTGAAACGTCCATAGCGTTCCGATGGATCCATCTCCACATATTCCAACTTGGTGGCTCCG
. : . : . : . : . : . :
JMFF008H13+ CCGCCGAGGATATCATTTAGACGGCCGGTTTTGTGCATGGTGATGAAACACACACAACAC
____________________________________________________________
consensus CCGCCGAGGATATCATTTAGACGGCCGGTTTTGTGCATGGTGATGAAACACACACAACAC
. : . : . : . : . : . :
JMFF008H13+ TATCAAAGTGTGTGTATATATATAAACCTTAATTCCTCAAAAAGCTTGGTTATTATATTG
____________________________________________________________
consensus TATCAAAGTGTGTGTATATATATAAACCTTAATTCCTCAAAAAGCTTGGTTATTATATTG
. : . : . : . : . : . :
JMFF008H13+ CACTACTACTAGTTGTGTATATATGTATGTATGTTTTTAATTTCCTAGTTTTTGAAAGCT
____________________________________________________________
consensus CACTACTACTAGTTGTGTATATATGTATGTATGTTTTTAATTTCCTAGTTTTTGAAAGCT
. : . : . : . : . : . :
JMFF008H13+ AATATTACGAAAGAGGGTGCTAAAAAATCCGAGGTTTCCCCTCGTGATTCTCGTATGAAA
____________________________________________________________
consensus AATATTACGAAAGAGGGTGCTAAAAAATCCGAGGTTTCCCCTCGTGATTCTCGTATGAAA
. : . : . : . : . : . :
JMFF008H13+ AAACACCAAACAAAAGCCAGAAGAGCCTCGAGTAATCGATCCTAAGCATGATCCAGCCCA
____________________________________________________________
consensus AAACACCAAACAAAAGCCAGAAGAGCCTCGAGTAATCGATCCTAAGCATGATCCAGCCCA
. : . : . : . : . : . :
JMFF008H13+ TCCCTATAACTCCACGCGAAAACTCGTCGTAGACTGTACCAGAAGGATTCATCTGACTTC
____________________________________________________________
consensus TCCCTATAACTCCACGCGAAAACTCGTCGTAGACTGTACCAGAAGGATTCATCTGACTTC