| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007M20 | Sequence | 560 | 005903 (8) | ref|XP_009766667.1| | 152 | PREDICTED: uncharacterized protein LOC104217988 [Nicotiana sylvestris] | |||||
| JMFF018H06 | Sequence | 523 | 005903 (8) | ref|XP_004242940.2| | 152 | PREDICTED: uncharacterized protein LOC101252095 [Solanum lycopersicum] | 602 | 008235 (4) | ref|XP_006341271.1| | 174 | PREDICTED: uncharacterized protein LOC102605018 [Solanum tuberosum] |
| JMFF028L06 | Sequence | 325 | 005903 (8) | ref|XP_009766667.1| | 62.4 | PREDICTED: uncharacterized protein LOC104217988 [Nicotiana sylvestris] | 421 | 008235 (4) | emb|CDP03295.1| | 7e-35 | unnamed protein product [Coffea canephora] |
| JMFF040L04 | Sequence | 524 | 005903 (8) | ref|XP_004242940.2| | 153 | PREDICTED: uncharacterized protein LOC101252095 [Solanum lycopersicum] | 662 | 008235 (4) | ref|XP_006341271.1| | 198 | PREDICTED: uncharacterized protein LOC102605018 [Solanum tuberosum] |
| JMFF041I21 | Sequence | 614 | 005903 (8) | ref|XP_009766667.1| | 90.9 | PREDICTED: uncharacterized protein LOC104217988 [Nicotiana sylvestris] | |||||
| JMFN016M08 | Sequence | 618 | 005903 (8) | ref|XP_009766667.1| | 144 | PREDICTED: uncharacterized protein LOC104217988 [Nicotiana sylvestris] | |||||
| JMFS033A04 | Sequence | 615 | 005903 (8) | ref|XP_009766667.1| | 90.9 | PREDICTED: uncharacterized protein LOC104217988 [Nicotiana sylvestris] | |||||
| JMFS059G07 | Sequence | 641 | 005903 (8) | ref|XP_009766667.1| | 90.9 | PREDICTED: uncharacterized protein LOC104217988 [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
JMFF040L04+ CTTGAAATCGCATAAATCGCAGGGTTCCAGGA
JMFF018H06+ GAAATCGCATAAATCGCAGGGTTCCAGGA
JMFF007M20+ GAAATCGCATAAATCGCAGGGTTCCAGGA
____________________________________________________________
consensus CTTGAAATCGCATAAATCGCAGGGTTCCAGGA
. : . : . : . : . : . :
JMFF040L04+ TTCTAATTCCTCGAAAACCTTTGTCGTAGCCTCCGGTGCTTATCAATTTTCCGGTGCTCG
JMFF018H06+ TTCTAATTCCTCGAAAACCTTTGTCGTAGCCTCCGGTGCTTATCAATTTTCCGGTGCTCG
JMFF007M20+ TTCTAATTCCTCGAAAACCTTTGTCGTAGCCTCCGGTGCTTATCAATTTTCCGGTGCTCG
____________________________________________________________
consensus TTCTAATTCCTCGAAAACCTTTGTCGTAGCCTCCGGTGCTTATCAATTTTCCGGTGCTCG
. : . : . : . : . : . :
JMFN016M08+ CTTGAGTGTCTTGACAACTTTAG
JMFF041I21+ CTTGAGTGTCTTGACAACTTTAG
JMFS033A04+ CTTGAGTGTCTTGACAACTTTAG
JMFS059G07+ CTTGAGTGTCTTGACAACTTTAG
JMFF040L04+ ACAGCCCTCCCGACGAGCACCATGTATTCAGGCTCAACTTGAGTGTCTTGACAACTTTAG
JMFF018H06+ ACAGCCCTCCCGACGAGCACCATGTATTCAGGCTCAACTTGAGTGTCTTGACAACTTTAG
JMFF007M20+ ACAGCCCTCCCGACGAGCACCATGTATTCAGGCTCAACTTGAGTGTCTTGACAACTTTAG
____________________________________________________________
consensus ACAGCCCTCCCGACGAGCACCATGTATTCAGGCTCAACTTGAGTGTCTTGACAACTTTAG
. : . : . : . : . : . :
JMFN016M08+ CGGTGTCGAGATCATAGGTAACGCCATGAGCCCA--AGTCTTCACGGCCCTTATCATCTT
JMFF041I21+ CGGTGTCGGGATCATAGGTAACGCCATGAGCCCAGCAGTCATCACGGCCCTTTTCATCTT
JMFS033A04+ CGGTGTCGGGATCATAGGTAACGCCATGAGCCCAGCAGTCATCACGGCCCTTTTCATCTT
JMFS059G07+ CGGTGTCGGGATCATAGGTAACGCCATGAGCCCAGCAGTCATCACGGCCCTTTTCATCTT
JMFF040L04+ CGGTGTCGAGATCATAGGTAACGCCATGAGCCCAGCAGTCTTCACGGCCCTTATCATCTT
JMFF018H06+ CGGTGTCGAGATCATAGGTAACGCCNTGAGCCCAGCAGTCTTCACGGCCCTTATCATCTT
JMFF028L06+ TTATCATCTT
JMFF007M20+ CGGTGTCGAGATCATAGGTAACGCCATGAGCCCAGCAGTCTTCACGGCCCTTATCATCTT
____________________________________________________________
consensus CGGTGTCGAGATCATAGGTAACGCCATGAGCCCAGCAGTCTTCACGGCCCTTATCATCTT
. : . : . : . : . : . :
JMFN016M08+ TTCTGCACCACTTAGGATTCTGCATCAGTGCGGAGCGACCAAGATTAATGGCGTCATACC
JMFF041I21+ TTCTGCACCACTTAGGATTCTGCATCAGTGCGGAGCGACCAAGATTAATGGCGTCAAACC
JMFS033A04+ TTCTGCACCACTTAGGATTCTGCATCAGTGCGGAGCGACCAAGATTAATGGCGTCAAACC
JMFS059G07+ TTCTGCACCACTTAGGATTCTGCATCAGTGCGGAGCGACCAAGATTAATGGCGTCAAACC
JMFF040L04+ TTCTGCACCACTTAGGATTCTGCATCAGTGCGGAGCGACCAAGATTAATGGCGTCATACC
JMFF018H06+ TTCTGCACCACTTAGGATTCTGCATCAGTGCGGAGCGACCAAGATTAATGGCGTCATACC
JMFF028L06+ TTCTGCACCACTTAGGATTCTGCATCAGTGCGGAGCGACCAAGATTAATGGCGTCATACC
JMFF007M20+ TTCTGCACCACTTAGGATTCTGCATCAGTGCGGAGCGACCAAGATTAATGGCGTCATACC
____________________________________________________________
consensus TTCTGCACCACTTAGGATTCTGCATCAGTGCGGAGCGACCAAGATTAATGGCGTCATACC
. : . : . : . : . : . :
JMFN016M08+ AGACAACCCTGTTGTTTGTCATCAACTGCATGTGCATGGCGGAAACACCCACGTTTTCAG
JMFF041I21+ AGACAACCTTGTTGTTTGTCATCAACTGCATGTGCATGGCGGAAACACCCACGTTTTCAG
JMFS033A04+ AGACAACCTTGTTGTTTGTCATCAACTGCATGTGCATGGCGGAAACACCCACGTTTTCAG
JMFS059G07+ AGACAACCTTGTTGTTTGTCATCAACTGCATGTGCATGGCGGAAACACCCACGTTTTCAG
JMFF040L04+ AGACAACCCTGTTGTTTGTCATCAACTGCATGTGCAAGGCGGAAACACCCACGTTTTCAG
JMFF018H06+ AGACAACCCTGTTGTTTGTCATCAACTGCATGTGCATGGCGGAAACACCCACGTTTTCAG
JMFF028L06+ AGACAACCCTGTTGTTTGTCATCAACTGCATGTGCATGGCGGAAACACCCACGTTTTCAG
JMFF007M20+ AGACAACCCTGTTGTTTGTCATCAACTGCATGTGCATGGCGGAAACACCCACGTTTTCAG
____________________________________________________________
consensus AGACAACCCTGTTGTTTGTCATCAACTGCATGTGCATGGCGGAAACACCCACGTTTTCAG
. : . : . : . : . : . :
JMFN016M08+ TTACAGTTTGCCAGCTCGAGGCTGAAGGATTCATCTCCAAATCTGGTTTCCCATAGGCGC
JMFF041I21+ TTACAGTTTGCCAGCTCGAGGCCGAAGGATTCATCTCCAAATCTGGTTTCCCATAGGCGC
JMFS033A04+ TTACAGTTTGCCAGCTCGAGGCCGAAGGATTCATCTCCAAATCTGGTTTCCCATAGGCGC
JMFS059G07+ TTACAGTTTGCCAGCTCGAGGCCGAAGGATTCATCTCCAAATCTGGTTTCCCATAGGCGC
JMFF040L04+ TTACAGTTTGCCAGCTCGAGGCTAAAGGATTCATCTCCAAATCTGGTTTCCCATAGGCGC
JMFF018H06+ TTACAGTTTGCCAGCTCGAGGCTGAAGGATTCATCTCCAAATCTGGTTTCCCATAGGCGC
JMFF028L06+ TTACAGTTTGCCAGCTCGAGGCTGAAGGATTCATCCCCAAATNTGGTTTCCCATAGGCGC
JMFF007M20+ TTACAGTTTGCCAGCTCGAGGCTGAAGGATTCATCTCCAAATCTGGTTTCCCATAGGCGC
____________________________________________________________
consensus TTACAGTTTGCCAGCTCGAGGCTGAAGGATTCATCTCCAAATCTGGTTTCCCATAGGCGC
. : . : . : . : . : . :
JMFN016M08+ TGCAAACAAACAATACAAGAACATAATAATAAGCTACTGTTA---------TTGACGCCA
JMFF041I21+ TGCAAACAAACAATACAAGAACATAATAATAAGCTACTGTTATTGA
JMFS033A04+ TGCAAACAAACAATACAAGAACATAATAATAAGCTACTGTTATTGATATTTTTGACGCCA
JMFS059G07+ TGCAAACAAACAATACAAGAACATAATAATAAGCTACTGTTA---------TTGA
JMFF040L04+ TGCAAACAAACAATACAAGAACATAATAATAAGCTACTGTTA---------TTGACGCCA
JMFF018H06+ TGCAAACAAACAATACAAGAACATAATAATAAGCTACTGTTA---------TTGACGCCA
JMFF028L06+ TGCAAACAAACAATACAAGAACATAATAATAAGCTACTGTTA---------TTGACGCCA
JMFF007M20+ TGCAAACAAACAATACAAGAACATAATAATAAGCTACTGTTA---------TTGACGCCA
____________________________________________________________
consensus TGCAAACAAACAATACAAGAACATAATAATAAGCTACTGTTA---------TTGACGCCA
. : . : . : . : . : . :
JMFN016M08+ TTGGAGAAACTCGATCTTTTATT--TATCTAGCTTCTCCAATGGACTAATTCTTTTTATT
JMFS033A04+ TTGGAGAAACTCGATCTTTTATT--TATCTAGCTTCTCCAATGGACTAAT
JMFF040L04+ TTGGAGAAACTCGATCTTTTATT--TATCTAGCTTCTCCAATGGACTAATTCTTTTTATT
JMFF018H06+ TTGGAGAAACACGATCTTTTATTTATATCTAGCTTCTCCAATGGACTAATTCTTTTTATT
JMFF028L06+ TTGGAGAAACACGATCTTTTATTTATATCTAGCTTCTCCAATGGACTAATTCTTTTTATT
JMFF007M20+ TTGGAGAAACACGATCTTTTATTTATATCTAGCTTCTCCAATGGACTAATTCTTTTTATT
____________________________________________________________
consensus TTGGAGAAACTCGATCTTTTATTTATATCTAGCTTCTCCAATGGACTAATTCTTTTTATT
. : . : . : . : . : . :
JMFF040L04+ TATTTCTCGATGTTCGATGTTC
JMFF018H06+ TATTTCTCGATGTTCGATGTTC
JMFF028L06+ TATTTCTCGATGTTCGATGTTC
JMFF007M20+ TATTCCTCGATGTTCGATGTTCGATGTTCGATGTTCGATGTTCGATGTTCGATGTTCGAT
____________________________________________________________
consensus TATTTCTCGATGTTCGATGTTCGATGTTCGATGTTCGATGTTCGATGTTCGATGTTCGAT