Contig 005900:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007B11Sequence548005900 (3)ref|XP_009617988.1|81.6PREDICTED: uncharacterized protein LOC104110244 [Nicotiana tomentosiformis]814013622 (2)ref|XP_006341344.1|287PREDICTED: uncharacterized protein LOC102594169 [Solanum tuberosum]
JMFS151H10Sequence620005900 (3)ref|XP_009617988.1|131PREDICTED: uncharacterized protein LOC104110244 [Nicotiana tomentosiformis]
JMSF047L22Sequence647005900 (3)ref|XP_009617988.1|130PREDICTED: uncharacterized protein LOC104110244 [Nicotiana tomentosiformis]709013622 (2)ref|XP_006341344.1|297PREDICTED: uncharacterized protein LOC102594169 [Solanum tuberosum]

Alignment

This contig is upended


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JMFS151H10+              TTTCGGGCCACATTGCCTCCTCCGAGACGATCTCGGGGTCACGCTATCTAGGCTTAT
JMSF047L22+             TTTTCGGGCCACATTGCNTCCTCCGAGACGATCTCGGGGTCACGCTATCTAGGCTTAT
                      ____________________________________________________________
consensus               TTTTCGGGCCACATTGCCTCCTCCGAGACGATCTCGGGGTCACGCTATCTAGGCTTAT
 
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JMFS151H10+           GTTCCCCGTCGATGCCTGGCTCTGAGAAGACTCAGACGACGCGTCGGAGGAGCAAGAAGC
JMSF047L22+           GTTCCCCGTCGATGCCTGGCTCTGAGAAGACTCAGACGACGCGTCGGAGGAGCAAGAAGC
                      ____________________________________________________________
consensus             GTTCCCCGTCGATGCCTGGCTCTGAGAAGACTCAGACGACGCGTCGGAGGAGCAAGAAGC
 
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JMFS151H10+           ATTCATCGACAAATTCGACCTCATCAGAAAAGACCTCTGCTCCTGCTGCCGCCTAAGGAC
JMSF047L22+           ATTCATCGACAAATTCGACCTCATCAGAAAAGACCTCTGCTCCTGCTGCCGCCTAAGGAC
                      ____________________________________________________________
consensus             ATTCATCGACAAATTCGACCTCATCAGAAAAGACCTCTGCTCCTGCTGCCGCCTAAGGAC
 
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JMFS151H10+           TGAACCTACGCTCCCACATTTCTTCGACGTTGCCACCTGAAACCGGGGTTTCGACAGTTG
JMSF047L22+           TGAACCTACGCTCCCACATTTCTTCGACGTTGCCACCTGAAACCGGGGTTTCGACAGTTG
                      ____________________________________________________________
consensus             TGAACCTACGCTCCCACATTTCTTCGACGTTGCCACCTGAAACCGGGGTTTCGACAGTTG
 
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JMFS151H10+           ATCGCCCCCCTCCGCCGCCGCCGCCGGAATTACAGAGGACTTCTTCTTTCCGCCGTCGCT
JMSF047L22+           ATCGCCCCCCTCCGCCGCCGCCGCCGGAATTACAGAGGACTTCTTCTTTCCGCCGTCGCT
                      ____________________________________________________________
consensus             ATCGCCCCCCTCCGCCGCCGCCGCCGGAATTACAGAGGACTTCTTCTTTCCGCCGTCGCT
 
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JMFS151H10+           CTCCGGCGACTTCTCCACCTTGTTAGACTTCAACTTCTCGGCGGGCTTCCGTAACTCCAA
JMSF047L22+           CTCCGGCGACTTCTCCACCTTGTTAGACTTCAACTTCTCGGCGGGCTTCCGTAACTCCAA
JMFF007B11+                                      CTTCAACTTCTCGGCGGGCTTCCGTAACTCCAA
                      ____________________________________________________________
consensus             CTCCGGCGACTTCTCCACCTTGTTAGACTTCAACTTCTCGGCGGGCTTCCGTAACTCCAA
 
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JMFS151H10+           CGATCTCGCCTTGTTACCCGCAGGCCCGAGCACGGGTCGGACCTCCGACTCGGCGTGGTT
JMSF047L22+           CGATCTCGCCTTGTTACCCGCAGGCCCGAGCACGGGTCGGACCTCCGACTCGGCGTGGTT
JMFF007B11+           CGATCTCGCCTTGTTACCCGCAGGCCCGAGCACGGGTCGGACCTCCGACTCGGCGTGGTT
                      ____________________________________________________________
consensus             CGATCTCGCCTTGTTACCCGCAGGCCCGAGCACGGGTCGGACCTCCGACTCGGCGTGGTT
 
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JMFS151H10+           CACCGATTTCTCCCGCGGTGGACCAGACATTGACTCAATTAGACTGAACCTGCTTCGATT
JMSF047L22+           CACCGATTTCTCCCGCGGTGGACCAGACATTGACTCAATTAGACTGAACCTGCTTCGATT
JMFF007B11+           CACCGATTTCTCCCGCGGTGGACCAGACATTGACTCAATTAGACTGAACCTGCTTCGATT
                      ____________________________________________________________
consensus             CACCGATTTCTCCCGCGGTGGACCAGACATTGACTCAATTAGACTGAACCTGCTTCGATT
 
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JMFS151H10+           TGAAGAAACTAGGGCTGAATCACAGTGAAATGAATGTACATTACGATTCAACAAGGATGA
JMSF047L22+           TGAAGAAACTAGGGCTGAATCACAGTGAAATGAATGTACATTACGATTCAACAAGGATGA
JMFF007B11+           TGAAGAAACTAGGGCTGAATCACAGTGAAATGAATGTACATTACGATTCAACAAGGATGA
                      ____________________________________________________________
consensus             TGAAGAAACTAGGGCTGAATCACAGTGAAATGAATGTACATTACGATTCAACAAGGATGA
 
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JMFS151H10+           AATGCTTAGAATGAAAACCCTAGACGGCCCAGAAGGTGCATTGGCATAAGAGTTCCAAGC
JMSF047L22+           AATGCTTAGAATGAAAACCCTAGACGGCCCAGAAGGTGCATTGGCATAAGAGTTCCAAGC
JMFF007B11+           AATGCTTAGAATGAAAACCCTAGACGGCCCAGAAGGTGCATTGGCATAAGAGTTCCAAGC
                      ____________________________________________________________
consensus             AATGCTTAGAATGAAAACCCTAGACGGCCCAGAAGGTGCATTGGCATAAGAGTTCCAAGC
 
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JMFS151H10+           TCGAGTCTTGCGGGTGAAACTCA                                     
JMSF047L22+           TCGAGTCTTGCGGGTGAAACTCAGCTGGCCGGCTCTGAGAAAACCGAC            
JMFF007B11+           TCGAGTCTTGCGGGTGAAACTCAGCTGGCCGGCTCTGAGAAAACCGACGGCGAGGCGGCT
                      ____________________________________________________________
consensus             TCGAGTCTTGCGGGTGAAACTCAGCTGGCCGGCTCTGAGAAAACCGACGGCGAGGCGGCT
 
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JMFF007B11+           TAGTTTATGGATGTTTCTAGAGAGACAGAATTCTGTTCCGAGAGAGAAGCAAAGACCAAT
                      ____________________________________________________________
consensus             TAGTTTATGGATGTTTCTAGAGAGACAGAATTCTGTTCCGAGAGAGAAGCAAAGACCAAT