Contig 005892:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004G23Sequence222005892 (6)380002671 (7)emb|CAN77628.1|6e-75hypothetical protein VITISV_029424 [Vitis vinifera]
JMFF040N10Sequence566005892 (6)ref|XP_008348693.1|4e-45PREDICTED: dihydroorotase, mitochondrial-like isoform X1 [Malus domestica]786002671 (7)emb|CAN77628.1|2e-73hypothetical protein VITISV_029424 [Vitis vinifera]
JMFF043D19Sequence633005892 (6)ref|XP_008348693.1|1e-44PREDICTED: dihydroorotase, mitochondrial-like isoform X1 [Malus domestica]628002671 (7)emb|CAN77628.1|2e-70hypothetical protein VITISV_029424 [Vitis vinifera]
JMSF025L15Sequence682005892 (6)ref|XP_002274917.2|2e-90PREDICTED: dihydroorotase, mitochondrial isoform X2 [Vitis vinifera]758002671 (7)emb|CAN77628.1|7e-114hypothetical protein VITISV_029424 [Vitis vinifera]
JMSF026L15Sequence566005892 (6)ref|XP_010656978.1|7e-70PREDICTED: dihydroorotase, mitochondrial isoform X1 [Vitis vinifera]814002671 (7)ref|XP_010656979.1|4e-119PREDICTED: dihydroorotase, mitochondrial isoform X3 [Vitis vinifera] emb|CBI2186
JMSF051F11Sequence137005892 (6)792002671 (7)ref|XP_010656979.1|9e-131PREDICTED: dihydroorotase, mitochondrial isoform X3 [Vitis vinifera] emb|CBI2186

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF025L15+ CGATCAAATACATCAACCTCTGGGCTAGTTACCTCTCCATGGACCAGAA
                      ____________________________________________________________
consensus CGATCAAATACATCAACCTCTGGGCTAGTTACCTCTCCATGGACCAGAA
 
. : . : . : . : . : . :
JMSF026L15+ TGGCAAACATTTTCCAAAAAGATCAG
JMSF025L15+ GAGGCATATTTTGCTCAACCATTTCCTCGAGAACTGGCAAACATTTTCCAAAAAGATCAG
                      ____________________________________________________________
consensus GAGGCATATTTTGCTCAACCATTTCCTCGAGAACTGGCAAACATTTTCCAAAAAGATCAG
 
. : . : . : . : . : . :
JMSF026L15+ TGACACCATCCTGAGAATTTGTTGTAGCACCAGCAGGATAAAGTTTTACAGCATATACTA
JMSF025L15+ TGACACCATCCTGAGAATTTGTTGTAGCACCAGCAGGATAAAGTTTTACAGCATATACTA
JMFF043D19+ AGCACCAGCAGGATAAAGTTTTACAGCATATACTA
                      ____________________________________________________________
consensus TGACACCATCCTGAGAATTTGTTGTAGCACCAGCAGGATAAAGTTTTACAGCATATACTA
 
. : . : . : . : . : . :
JMSF026L15+ CTCCACTTTGCNTGGCTTGTTTAATTTCAAGAGGACTTGTTGTATCTGTCAAATATAGTG
JMSF025L15+ CTCCACTTTGCCTGGCTTGTTTAATTTCAAGAGGACTTGTTGTATCTGTCAAATATAGTG
JMFF040N10+ CTTGTTTAATTTCAAGAGGACTTGTTGTATCTGTCAAATATAGTG
JMFF043D19+ CTCCACTTTG-CTGGCTTGTTTAATTTCAAGAGGACTTGTTGTATCTGTCAAATATAGTG
                      ____________________________________________________________
consensus CTCCACTTTGCCTGGCTTGTTTAATTTCAAGAGGACTTGTTGTATCTGTCAAATATAGTG
 
. : . : . : . : . : . :
JMSF026L15+ TCATAAGGGGCATAAAATTAGAATTAGGAGGCAATGCTTTTAAGATGGAATCCCGGTATG
JMSF025L15+ TCATAAGGGGCATAAAATTAGAATTAGGAGGCAATGCTTTTAAGATGGAATCCCGGTATG
JMFF040N10+ TCATAAGGGGCATAAAATTAGAATTAGGAGGCAATGCTTTTAAGATGGAATCCCGGTATG
JMFF043D19+ TCATAAGGGGCATAAAATTAGAATTAGGAGGCAATGCTTTNAAGATGGAATCCCGGTATG
                      ____________________________________________________________
consensus TCATAAGGGGCATAAAATTAGAATTAGGAGGCAATGCTTTTAAGATGGAATCCCGGTATG
 
. : . : . : . : . : . :
JMSF026L15+ CAACAGCTGCAGCAGTGGTGGTGACAGGAGGCTTCAGATTTGGCATGATGATTGCCCTCC
JMSF025L15+ CAACAGCTGCAGCAGTGGTGGTGACAGGAGGCTTCAGATTTGGCATGATGATTGCCCTCC
JMFF040N10+ CAACAGCTGCAGCAGTGGTGGTGACAGGAGGCTTCAGATTTGGCATGATGATTGCCCTCC
JMFF043D19+ CAACAGCTGCAGCAGTGGTGGTGACAGGAGGCTTCAGATTTGGCATGATGATTGCCCTCC
                      ____________________________________________________________
consensus CAACAGCTGCAGCAGTGGTGGTGACAGGAGGCTTCAGATTTGGCATGATGATTGCCCTCC
 
. : . : . : . : . : . :
JMSF026L15+ CGAAGTTACGTGCACTGTGAGAGACAACCGCTTCAAGAAGGTCNCCATCACGGAGATGAA
JMSF025L15+ CGAAGTTACGTGCACTGTGAGAGACAACCGCTTCAAGAAGGTCACCATCACGGAGATGAA
JMFF040N10+ CGAAGTTACGTGCACTGTGAGAGACAACCGCTTCAAGAAGGTCACCATCACGGAGATGAA
JMFF043D19+ CGAAGTTACGTGCACTGTGAGAGACAACCGCTTCAAGAAGGTCACCATCACGGAGATGAA
                      ____________________________________________________________
consensus CGAAGTTACGTGCACTGTGAGAGACAACCGCTTCAAGAAGGTCACCATCACGGAGATGAA
 
. : . : . : . : . : . :
JMSF026L15+ GATGCCAATCATCAGGTTGTGTAATTGAGAGCTCCATTCTCACTCTATTTGCTTTCCTCT
JMSF025L15+ GATGCCAATCATCAGGTTGTGTAATTGAGAGCTCCATTCTCACTCTATTTGCTTTCCTCT
JMFF040N10+ GATGCCAATCATCAGGTTGTGTAATTGAGAGCTCCATTCTCACTCTATTTGCTTTCCTCT
JMFF043D19+ GATGCCAATCATCAGGTTGTGTAATTGAGAGCTCCATTCTCACTCTATTTGCTTTCCTCT
                      ____________________________________________________________
consensus GATGCCAATCATCAGGTTGTGTAATTGAGAGCTCCATTCTCACTCTATTTGCTTTCCTCT
 
. : . : . : . : . : . :
JMSF026L15+ GATTTTGCCCACTAAATTTAGAAACTGGAAAAGTCAATGCCTTGCAAGGAAGCGATATGG
JMSF025L15+ GATTTTGCCCACTAAATTTAGAAACTGGAAAAGTCAATGCCTTGCAAGGAAGCGATATGG
JMFF040N10+ GATTTTGCCCACTAAATTTAGAAACTGGAAAAGTCAATGCCTTGCAAGGAAGCGATATGG
JMFF043D19+ GATTTTGCCCACTAAATTTAGAAACTGGAAAAGTCAATGCCTTGCAAGGAAGCGATATGG
                      ____________________________________________________________
consensus GATTTTGCCCACTAAATTTAGAAACTGGAAAAGTCAATGCCTTGCAAGGAAGCGATATGG
 
. : . : . : . : . : . :
JMSF026L15+ CCTTCATCATATGGAAGCTAAAAAACAAGAACCATTCTCCTCAAANCTAAGAAGTTTAAC
JMSF025L15+ CCTTCATCATATGGAAGCTAAAAAACAAGAACCATTCTCCTCAAAACTAAGAAGTTTAAC
JMFF040N10+ CCTTCATCATATGGAAGCTAAAAAACAAGAACCATTCTCCTCAAAACTAAGAAGTTTAAC
JMFF043D19+ CCTTCATCATATGGAAGCTAAAAAACAAGAACCATTCTCCTCAAAACTAAGAAGTTTAAC
                      ____________________________________________________________
consensus CCTTCATCATATGGAAGCTAAAAAACAAGAACCATTCTCCTCAAAACTAAGAAGTTTAAC
 
. : . : . : . : . : . :
JMSF026L15+ TGTCCACTGAACTTCAGATCATATNGGAAAGATTAAAAACTCCCAAGTCTGTAGCTTTCA
JMSF025L15+ TGTCCACTGAACTTCAGATCATATTGGAAAGATTAAAAACTCCCAAGTCTGTAGCTTTCA
JMFF040N10+ TGTCCACTGAACTTCAGATCATATTGGAAAGATTAAAAACTCCCAAGTCTGTAGCTTTCA
JMSF051F11+ CTGAACTTCAGATCATATTGGAAAGATTAAAAACTCCTAAGTCTGTAGCTTTCA
JMFF043D19+ TGTCCACTGAACTTCAGATCATATTGGAAAGATTAAAAACTCCCAAGTCTGTAGCTTTCA
JMFF004G23+ CTGAACTTCAGATCATATTGGAAAGATTAAAAACTCCCAAGTCTGTAGCTTTCA
                      ____________________________________________________________
consensus TGTCCACTGAACTTCAGATCATATTGGAAAGATTAAAAACTCCCAAGTCTGTAGCTTTCA
 
. : . : . : . : . : . :
JMSF025L15+ TTAACTTCTGAGTATTACTCATCCAAGCAAGC
JMFF040N10+ TTAACTTCTGAGTATTACTCATCCAAGCAAGCACAAGAAAAGTTATACGGAGTAGATTTT
JMSF051F11+ TTAACTTCTGAGTATTACTCATCCAAGCAAGC
JMFF043D19+ TTAACTTCTGAGTATTACTCATCCAAGCAAGCACAAGAAAAGTTATACGGAGTAGATTTT
JMFF004G23+ TTAACTTCTGAGTATTACTCATCCAAGCAAGCACAAGAAAAGTTATACGGAGTAGATTTT
                      ____________________________________________________________
consensus TTAACTTCTGAGTATTACTCATCCAAGCAAGCACAAGAAAAGTTATACGGAGTAGATTTT
 
. : . : . : . : . : . :
JMFF040N10+ ATCAGACATTCTCTCCGGCGAATCCAAAATATTGGAACGAT
JMFF043D19+ ATCAGACATTCTCTCCGGCGAATCCAAAATATTGGAACGAT
JMFF004G23+ ATCAGACATTCTCTCCGGCGAATCCAAAATATTGGAACGATGATACATGAGTAGATCTAC
                      ____________________________________________________________
consensus ATCAGACATTCTCTCCGGCGAATCCAAAATATTGGAACGATGATACATGAGTAGATCTAC