Contig 005881:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002O24Sequence516005881 (2)ref|XP_009776617.1|5e-40PREDICTED: zinc finger CCCH domain-containing protein 32-like isoform X2 [Nicot148020139
JMSF019D15Sequence478005881 (2)ref|XP_009776617.1|3e-41PREDICTED: zinc finger CCCH domain-containing protein 32-like isoform X2 [Nicot729019300ref|XP_009776617.1|8e-47PREDICTED: zinc finger CCCH domain-containing protein 32-like isoform X2 [Nicot

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF019D15+                               TGGTGGAACTTGCAGGATGCACCAAACTTACAGAGTCCTG
JMFF002O24+                                   GGAACTTGCAGGATGCACCAAACTTACAGAGTCCTG
                      ____________________________________________________________
consensus                                 TGGTGGAACTTGCAGGATGCACCAAACTTACAGAGTCCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF019D15+           TTCTTAAATAATACTGACATGTAGGCTCTCCTGGTCGTTCTGGATATACCCATATTCTCA
JMFF002O24+           TTCTTAAATAATACTGACATGTAGGCTCTCCTGGTCGTTCTGGATATACCCATATTCTCA
                      ____________________________________________________________
consensus             TTCTTAAATAATACTGACATGTAGGCTCTCCTGGTCGTTCTGGATATACCCATATTCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF019D15+           TTTGTGGCAATCCAACAGAGCCAAAACCGCGAGGATGATTGAACCGACACTTGGAACCGA
JMFF002O24+           TTTGTGGCAATCCAACAGAGCCAAAACCGCGAGGATGATTGAACCGACACTTGGAACCGA
                      ____________________________________________________________
consensus             TTTGTGGCAATCCAACAGAGCCAAAACCGCGAGGATGATTGAACCGACACTTGGAACCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF019D15+           ATCCACAGAACCCGGTCCGCATGTAGTAGGCGCAGTCGGACACGCCCAGCCTCTCCGGGT
JMFF002O24+           ATCCACAGAACCCGGTCCGCATGTAGTAGGCGCAGTCGGACACGCCCAGCCTCTCCGGGT
                      ____________________________________________________________
consensus             ATCCACAGAACCCGGTCCGCATGTAGTAGGCGCAGTCGGACACGCCCAGCCTCTCCGGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF019D15+           ACCCTTCCGTGACCCACAATCCCAACCTCCGAATCGATTCTTCCTTCCCCGTTACTGACC
JMFF002O24+           ACCCTTCCGTGACCCACAATCCCAACCTCCGAATCGATTCTTCCTTCCCCGTTACTGACC
                      ____________________________________________________________
consensus             ACCCTTCCGTGACCCACAATCCCAACCTCCGAATCGATTCTTCCTTCCCCGTTACTGACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF019D15+           GCACCGGAGCCCATACCGCCCGCCGATCAATCTGCAACCCGTCTTTTGCCCTGCTCTGTC
JMFF002O24+           GCACCGGAGCCCATACCGCCCGCCGATCAATCTGCAACCCGTCTTTTGCCCTGCTCTGTC
                      ____________________________________________________________
consensus             GCACCGGAGCCCATACCGCCCGCCGATCAATCTGCAACCCGTCTTTTGCCCTGCTCTGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF019D15+           CGTACAACTCCATACCACTCTGGTTTTTGTAAGCAGTGTGTTACTTGGAAGCGTTGGCTT
JMFF002O24+           CGTACAACTCCATACCACTCTGGTTTTTGTAAGCAGTGTGTTACTTGGAAGCGTTGGCTT
                      ____________________________________________________________
consensus             CGTACAACTCCATACCACTCTGGTTTTTGTAAGCAGTGTGTTACTTGGAAGCGTTGGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF019D15+           TTGTAATACTGGTAGTACAATAATCTGTCCTGTTTCTCTCTCTACACCTCTGCTTCTCAC
JMFF002O24+           TTGTAATACTGGTAGTACAATAATCTGTCCTGTTTCTCTCTCTACACCTCTGCTTCTCAC
                      ____________________________________________________________
consensus             TTGTAATACTGGTAGTACAATAATCTGTCCTGTTTCTCTCTCTACACCTCTGCTTCTCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF019D15+           TTTACAGTCTCCACTGC                                           
JMFF002O24+           TTTACAGTCTCCACTGCGCTTTCTCTCTCTCTCTCTCGGAAACTGTTTGTATGCGTACCC
                      ____________________________________________________________
consensus             TTTACAGTCTCCACTGCGCTTTCTCTCTCTCTCTCTCGGAAACTGTTTGTATGCGTACCC