Contig 005863:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP019H07Sequence563005863 (2)ref|XP_009795340.1|7e-64PREDICTED: pumilio homolog 1-like isoform X2 [Nicotiana sylvestris]
JMFS101H11Sequence628005863 (2)ref|XP_009597729.1|4e-112PREDICTED: pumilio homolog 2-like isoform X2 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS101H11+ TTCCATGTTCAAAAAACTTN
                      ____________________________________________________________
consensus TTCCATGTTCAAAAAACTTN
 
. : . : . : . : . : . :
JMFS101H11+ TGGATCACATAATTACCAAACACATCAGTCATTAAGTTAAGAGCATGGGGCAAAATTTCA
                      ____________________________________________________________
consensus TGGATCACATAATTACCAAACACATCAGTCATTAAGTTAAGAGCATGGGGCAAAATTTCA
 
. : . : . : . : . : . :
JMFS101H11+ TGGAAGACCATGTTCTTCTCTTCAACAGTAGCAGTCTCAAGTTTTTGTTGAATGAACCGA
                      ____________________________________________________________
consensus TGGAAGACCATGTTCTTCTCTTCAACAGTAGCAGTCTCAAGTTTTTGTTGAATGAACCGA
 
. : . : . : . : . : . :
JMFS101H11+ CTTCCATACTGATCCGCACTGAACTCAACAACATGACCATCTATCTCTGATAACTCAAAG
                      ____________________________________________________________
consensus CTTCCATACTGATCCGCACTGAACTCAACAACATGACCATCTATCTCTGATAACTCAAAG
 
. : . : . : . : . : . :
JMFS101H11+ CATTTAGTTTTACTGCTCTTAAACTCATCTAATAATGATGACGCAAAACTCTGACCCAAG
                      ____________________________________________________________
consensus CATTTAGTTTTACTGCTCTTAAACTCATCTAATAATGATGACGCAAAACTCTGACCCAAG
 
. : . : . : . : . : . :
JMFS101H11+ TTAGATGGTGAATCAGAGTGCCAGGCACCCATTACACCAGCACCCAAGTTCCTCATGCCT
JMCP019H07+ CAGCACCCAAGaaggaCAacgga
                      ____________________________________________________________
consensus TTAGATGGTGAATCAGAGTGCCAGGCACCCATTACACCAGCACCCAAGTTCCTCATGCCT
 
. : . : . : . : . : . :
JMFS101H11+ GATGTAAAATGCATATTCCTTTCACCATACCTTACAGGACTACCAGGTCCAAAAGGGGAA
JMCP019H07+ ctacTAAAATGCtatTTggTTTCAggtatggaatgtcGACTACCAGGTCCAAAAGGGGAA
                      ____________________________________________________________
consensus GATGTAAAATGCATATTCCTTTCACCATACCTTACAGGACTACCAGGTCCAAAAGGGGAA
 
. : . : . : . : . : . :
JMFS101H11+ TTCGGAAGAATTGAACCTGCTAATGGACTTCCAGGGTATGATATACCAGCACCAAGTGTT
JMCP019H07+ TTCGGAAGAATTGAACCTGCTAATGGACTTCCAGGGTATGATATACCAGCACCAAGTGTT
                      ____________________________________________________________
consensus TTCGGAAGAATTGAACCTGCTAATGGACTTCCAGGGTATGATATACCAGCACCAAGTGTT
 
. : . : . : . : . : . :
JMFS101H11+ GAATTTCCATAGTAACCATGATTTATGCCACCAGTTTTACTAAAGCTTGGAAAGCCATAC
JMCP019H07+ GAATTTCCATAGTAACCATGATTTATGCCACCAGTTTTACTAAAGCTTGGAAAGCCATAC
                      ____________________________________________________________
consensus GAATTTCCATAGTAACCATGATTTATGCCACCAGTTTTACTAAAGCTTGGAAAGCCATAC
 
. : . : . : . : . : . :
JMFS101H11+ TGTGATTTCTGAGAAGCAAGCAATCCCAGGTGAGCTTTCTGAAGTTCAAGATAATCCATG
JMCP019H07+ TGTGATTTCTGAGAAGCAAGCAATCCCAGGTGAGCTTTCTGAAGTTCAAGATAATCCATG
                      ____________________________________________________________
consensus TGTGATTTCTGAGAAGCAAGCAATCCCAGGTGAGCTTTCTGAAGTTCAAGATAATCCATG
 
. : . : . : . : . : . :
JMFS101H11+ TATGAATTGCCCAGGGATTCCCTGTTAATTATTGGATTGTTAAGAGCTGTGAGGTTAGCA
JMCP019H07+ TATGAATTGCCCAGGGATTCCCTGTTAATTATTGGATTGTTAAGAGCTGTGAGGTTAGCA
                      ____________________________________________________________
consensus TATGAATTGCCCAGGGATTCCCTGTTAATTATTGGATTGTTAAGAGCTGTGAGGTTAGCA
 
. : . : . : . : . : . :
JMFS101H11+ GCAGAAAG
JMCP019H07+ GCAGAAAGATCAGTTGATCTCAAGTACTGAAGGTACAGAGGATCCATCAAGGGATTCTGA
                      ____________________________________________________________
consensus GCAGAAAGATCAGTTGATCTCAAGTACTGAAGGTACAGAGGATCCATCAAGGGATTCTGA
 
. : . : . : . : . : . :
JMCP019H07+ ACAGAATTCCCCAAGCTTGAATTCCTAAGTCTATGGAGGTTCTGTATTTCTGCTGCAGCA
                      ____________________________________________________________
consensus ACAGAATTCCCCAAGCTTGAATTCCTAAGTCTATGGAGGTTCTGTATTTCTGCTGCAGCA
 
. : . : . : . : . : . :
JMCP019H07+ GCTAATAAATTAGGTGGCAAAGTTAAGCCACCTCCCATTGATCGTGAGTCAATTCCAGAA
                      ____________________________________________________________
consensus GCTAATAAATTAGGTGGCAAAGTTAAGCCACCTCCCATTGATCGTGAGTCAATTCCAGAA
 
. : . : . : . : . : . :
JMCP019H07+ GCTCCAATTGCTGTTCCAGCACCAACATTATCAGATAGGTAAGGCAAATGACCACTCTGC
                      ____________________________________________________________
consensus GCTCCAATTGCTGTTCCAGCACCAACATTATCAGATAGGTAAGGCAAATGACCACTCTGC