Contig 005846:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020I18Sequence640001004 (3)ref|XP_009770676.1|2e-21PREDICTED: GTP-binding protein OBGC, chloroplastic [Nicotiana sylvestris]770005846 (3)ref|XP_009770676.1|2e-75PREDICTED: GTP-binding protein OBGC, chloroplastic [Nicotiana sylvestris]
JMSF021I18Sequence325001004 (3)ref|XP_009770676.1|3e-14PREDICTED: GTP-binding protein OBGC, chloroplastic [Nicotiana sylvestris]672005846 (3)ref|XP_009770676.1|4e-60PREDICTED: GTP-binding protein OBGC, chloroplastic [Nicotiana sylvestris]
JMSF051I13Sequence646001004 (3)ref|XP_009770676.1|1e-31PREDICTED: GTP-binding protein OBGC, chloroplastic [Nicotiana sylvestris]747005846 (3)ref|XP_009770676.1|3e-70PREDICTED: GTP-binding protein OBGC, chloroplastic [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF020I18+ TCCAGAAGCATCTGAAAATTGGCTATCCTTCAGGGACAGCCTGCAAAGCCGTGGGTAT
rJMSF051I13+ AGGGACAGCCTGCAAAGCCGTGGGTAT
                      ____________________________________________________________
consensus TCCAGAAGCATCTGAAAATTGGCTATCCTTCAGGGACAGCCTGCAAAGCCGTGGGTAT
 
. : . : . : . : . : . :
rJMSF020I18+ GAGCCTTTTTGCATGAGTGCAGTGAAGAAAGACGGTACACATGAAGTGATATGCGCTGCA
rJMSF021I18+ TTTTGCATGAGTGCAGTGAAGAAAGNCGGTACACATGAAGTGATATGCGCTGCA
rJMSF051I13+ GAGCCTTTTTGCATGAGTGCAGTGAAGAAAGACGGTACACATGAAGTGATATGCGCTGCA
                      ____________________________________________________________
consensus GAGCCTTTTTGCATGAGTGCAGTGAAGAAAGACGGTACACATGAAGTGATATGCGCTGCA
 
. : . : . : . : . : . :
rJMSF020I18+ TATGAGCTTGTTCGCAGGAGAAGAACTGCTGCTGAGGAAGAAGATGCAGTAGGTCCAGAA
rJMSF021I18+ TATGAGCTTGTTCGCAGGAGAAGAACTNCTNCTGAGGAAGAAGATGCNGTAGGTCCAGAA
rJMSF051I13+ TATGAGCTTGTTCGCAGGAGAAGAACTGCTGCTGAGGAAGAAGATGCAGTAGGTCCAGAA
                      ____________________________________________________________
consensus TATGAGCTTGTTCGCAGGAGAAGAACTGCTGCTGAGGAAGAAGATGCAGTAGGTCCAGAA
 
. : . : . : . : . : . :
rJMSF020I18+ AATTTGAACTATGTGGCTGATACATTGCAAAAAGAGAAAAATGCTCCAATAACTGAATTT
rJMSF021I18+ AATTTGAACTATGTGGCTGATACATTGCAAAAAGAGAAAAATGCTCCAATAACTGAATTT
rJMSF051I13+ AATTTGAACTATGTGGCTGATACATTGCAAAAAGAGAAAAATGCTCCAATAACTGAATTT
                      ____________________________________________________________
consensus AATTTGAACTATGTGGCTGATACATTGCAAAAAGAGAAAAATGCTCCAATAACTGAATTT
 
. : . : . : . : . : . :
rJMSF020I18+ GAGATATCTCACGATGATGCTTCCAATACATGGCATGTTGTGGGATCAGGCCTGCAGCGT
rJMSF021I18+ GAGNTATCTCACGATGATGCTTCCAATACATGGCATNTTGTGGGATCAGGCCTGCAGCGT
rJMSF051I13+ GAGATATCTCACGATGATGCTTCCAATACATGGCATGTTGTGGGATCAGGCCTGCAGCGT
                      ____________________________________________________________
consensus GAGATATCTCACGATGATGCTTCCAATACATGGCATGTTGTGGGATCAGGCCTGCAGCGT
 
. : . : . : . : . : . :
rJMSF020I18+ TTTATCCAAATGACAAACTGGAGATATATAGATTCTGAGAGAAGATTTCAACATGTTCTG
rJMSF021I18+ TTTATCCAAATGACAAACTGGAGATATATAGATTNTGAGAGAAGATTTCAACATGTTCNG
rJMSF051I13+ TTTATCCAAATGACAAACTGGAGATATATAGATTCTGAGAGAAGATTTCAACATGTTCTG
                      ____________________________________________________________
consensus TTTATCCAAATGACAAACTGGAGATATATAGATTCTGAGAGAAGATTTCAACATGTTCTG
 
. : . : . : . : . : . :
rJMSF020I18+ GAGGCAAGTGGTGTAAATAAATCTCTCATAAAACTTGGTGTAAAGGAAGGCGACACTGTC
rJMSF021I18+ GAGGCAAGTGGTGTAAATAAATCTCTCATAAAACTTGGNGTAAAGGAAGGCGACACTGTC
rJMSF051I13+ GAGGCAAGTGGTGTAAATAAATCTCTCATAAAACTTGGTGTAAAGGAAGGCGACACTGTC
                      ____________________________________________________________
consensus GAGGCAAGTGGTGTAAATAAATCTCTCATAAAACTTGGTGTAAAGGAAGGCGACACTGTC
 
. : . : . : . : . : . :
rJMSF020I18+ ATTGTTGGGGATATGGAGATGGTATGGAATGATGGCCCAAGCAACTCAGGTCCTACAAGT
rJMSF021I18+ ATTGTTGGGGATATGGAGATGGTATGGAATGATGGCCCAAGCAACTCAGGTCCTACAAGT
rJMSF051I13+ ATTGTTGGGGATATGGAGATGGTATGGAATGATGGCCCAAGCAACTCAGGTCCTACAAGT
                      ____________________________________________________________
consensus ATTGTTGGGGATATGGAGATGGTATGGAATGATGGCCCAAGCAACTCAGGTCCTACAAGT
 
. : . : . : . : . : . :
rJMSF020I18+ AGGAGGAAGTGGGCGACTGAACGGATTCAGTGACTTTCATGCTCGCCATTTCCTAACCCA
rJMSF021I18+ AGGAGGAAGTGGGCGACTGAACGGANTCAGTGACTTTCATGCTCGCCATTTCCTANCCCA
rJMSF051I13+ AGGAGGAAGTGGGCGACTGAACGGATTCAGTGACTTTCATGCTCGCCATTTCCTAACCCA
                      ____________________________________________________________
consensus AGGAGGAAGTGGGCGACTGAACGGATTCAGTGACTTTCATGCTCGCCATTTCCTAACCCA
 
. : . : . : . : . : . :
rJMSF020I18+ TTTTAGTCTAAGTTGTTCGTTTAAAGGCATAACTTGTGAAGGTTTGGTCATGCCTACCAC
rJMSF021I18+ TNTTAGTNTAANTTGTTCGTTTAAAGGCATAACTTGTGANGGNTTGGTCATGCCTACCAC
rJMSF051I13+ TTTTAGTCTAAGTTGTTCGTTTAAAGGCATAACTTGTGAAGGTTTGGTCATGCCTACCAC
                      ____________________________________________________________
consensus TTTTAGTCTAAGTTGTTCGTTTAAAGGCATAACTTGTGAAGGTTTGGTCATGCCTACCAC
 
. : . : . : . : . : . :
rJMSF020I18+ TAAGAATCAATCCGCAAAATGGTGAACTCAATCACGGTTCCAGCTGCAATTTGGTATCTT
rJMSF021I18+ TAAGAATCAATCCGCAAAATGGTGAACTCAATCACGGTTCCAGCTGCAATTTGGTATCTT
rJMSF051I13+ TAAGAATCAATCCGCAAAATGGTGAACTCAATCACGGTTCCAGCTGCAATTTGGTATCTT
                      ____________________________________________________________
consensus TAAGAATCAATCCGCAAAATGGTGAACTCAATCACGGTTCCAGCTGCAATTTGGTATCTT
 
. : . : . : . : . : . :
rJMSF020I18+ CGTGACGGATGTTCTTTGAAACAGTCGTGCATGGGCGGACAGGACAAATGAGTAGTCCAG
rJMSF021I18+ CGTGNCGGATGTTCTTTGAANCAGTAGTGCATGGGCGGACAGGACAAATGAGTAGTCCAG
rJMSF051I13+ CGTGACGGATGTTCTTTGAAACAGTCGTGCATGGGCGGACAGGACAAATGAGTAGTCCAG
                      ____________________________________________________________
consensus CGTGACGGATGTTCTTTGAAACAGTCGTGCATGGGCGGACAGGACAAATGAGTAGTCCAG
 
. : . : . : . : . : . :
rJMSF020I18+ TGAGTTCACTATAACCATATCTCTGTTTGATAC
rJMSF021I18+ TGAGTTCACTATANCCAT
rJMSF051I13+ TGAGTTCACTATAACCATATCTCTGTTTGATACAGTATTTATAGCTATAGTTGTAATTTT
                      ____________________________________________________________
consensus TGAGTTCACTATAACCATATCTCTGTTTGATACAGTATTTATAGCTATAGTTGTAATTTT