Contig 005836:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016A10Sequence242003621 (2)770005836 (2)ref|XP_009609395.1|1e-60PREDICTED: mitochondrial substrate carrier family protein B [Nicotiana tomentos
JMSF050F12Sequence733003621 (2)ref|XP_009609395.1|3e-96PREDICTED: mitochondrial substrate carrier family protein B [Nicotiana tomentos732005836 (2)ref|XP_009609395.1|7e-52PREDICTED: mitochondrial substrate carrier family protein B [Nicotiana tomentos

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF016A10+ TATCGCAATAAGTTTCTCTGTTTATGAATCTTTGAGATCTTATNGGCTAG
rJMSF050F12+ CTTATNGGCTAG
                      ____________________________________________________________
consensus TATCGCAATAAGTTTCTCTGTTTATGAATCTTTGAGATCTTATNGGCTAG
 
. : . : . : . : . : . :
rJMSF016A10+ CTCACAGGCCTGATGATCCCACTGTTCTCATCAGTCTTACTTGTGGAAGTCTTTCTGGAA
rJMSF050F12+ CTCACAGGCCTGATGATCCCACTGTTCTCATCAGTCTTACTTGTGGAAGTCTTTCTGGAA
                      ____________________________________________________________
consensus CTCACAGGCCTGATGATCCCACTGTTCTCATCAGTCTTACTTGTGGAAGTCTTTCTGGAA
 
. : . : . : . : . : . :
rJMSF016A10+ TTGCATCATCTACTGCAACATTCCCTTTGGACCTTGTAAGGCGAAGAATGCAATTGGAAG
rJMSF050F12+ TTGCATCATCTACTGCAACATTCCCTTTGGACCTTGTAAGGCGAAGAATGCAATTGGAAG
                      ____________________________________________________________
consensus TTGCATCATCTACTGCAACATTCCCTTTGGACCTTGTAAGGCGAAGAATGCAATTGGAAG
 
. : . : . : . : . : . :
rJMSF016A10+ GGGCTGGTGGTCGAGCGCGTGTGTATAACACTGGCTTACTCGGGGCATTTAGGCACATAA
rJMSF050F12+ GGGCTGGTGGTCGAGCGCGTGTGTATAACACTGGCTTACTCGGGGCATTTAGGCACATAA
                      ____________________________________________________________
consensus GGGCTGGTGGTCGAGCGCGTGTGTATAACACTGGCTTACTCGGGGCATTTAGGCACATAA
 
. : . : . : . : . : . :
rJMSF016A10+ TTCAAACAGAAGGCTTTTGTGGGTTTTATAGAGGCATTATGCCCGAGTACTACAAAGTTG
rJMSF050F12+ TTCAAACAGAAGGCTTTTGTGGGTTTTATAGAGGCATTATGCCCGAGTACTACAAAGTTG
                      ____________________________________________________________
consensus TTCAAACAGAAGGCTTTTGTGGGTTTTATAGAGGCATTATGCCCGAGTACTACAAAGTTG
 
. : . : . : . : . : . :
rJMSF016A10+ TACCTGGCATGGGAATTGTATTCATGACATACGAGACGCTGAAGAAACTTCTATCTGAAT
rJMSF050F12+ TACCTGGCATGGGAATTGTATTCATGACATACGAGACGCTGAAGAAACTTCTATCTGAAT
                      ____________________________________________________________
consensus TACCTGGCATGGGAATTGTATTCATGACATACGAGACGCTGAAGAAACTTCTATCTGAAT
 
. : . : . : . : . : . :
rJMSF016A10+ CACCCTTCAACTAATGTCCAACTCACCCTTCAACTATGTCCAACTCATCTTTCAACAAAT
rJMSF050F12+ CACCCTTCAACTAATGTCCAACTCACCCTTCAACTATGTCCAACTCATCTTTCAACAAAT
                      ____________________________________________________________
consensus CACCCTTCAACTAATGTCCAACTCACCCTTCAACTATGTCCAACTCATCTTTCAACAAAT
 
. : . : . : . : . : . :
rJMSF016A10+ GGTTTTACGGCTTACTCCCCATGCTGGAGAGGTCCTACAAGGATCAGTTTTGTCTTACAA
rJMSF050F12+ GGTTTTACGGCTTACTCCCCATGCTGGAGAGGTCCTACAAGGATCAGTTTTGTCTTACAA
                      ____________________________________________________________
consensus GGTTTTACGGCTTACTCCCCATGCTGGAGAGGTCCTACAAGGATCAGTTTTGTCTTACAA
 
. : . : . : . : . : . :
rJMSF016A10+ AGCTTGCTAGTTAGAAAAGTTTAATAGGTAATTATAACTATCACGCGGTGGTAACTATTA
rJMSF050F12+ AGCTTGCTAGTTAGAAAAGTTTAATAGGTAATTATAACTATCACGCGGTGGTAACTATTA
                      ____________________________________________________________
consensus AGCTTGCTAGTTAGAAAAGTTTAATAGGTAATTATAACTATCACGCGGTGGTAACTATTA
 
. : . : . : . : . : . :
rJMSF016A10+ CGGAGTATATGTTACCAACTAACTTTTGTTGTATAGACTATTAAAGTGTCAAGCGTGGTC
rJMSF050F12+ CGGAGTATATGTTACCAACTAACTTTTGTTGTATAGACTATTAAAGTGTCAAGCGTGGTC
                      ____________________________________________________________
consensus CGGAGTATATGTTACCAACTAACTTTTGTTGTATAGACTATTAAAGTGTCAAGCGTGGTC
 
. : . : . : . : . : . :
rJMSF016A10+ TCACATCAAATGCATTTCTAGTTGAAATGTTGGTCCTGGATACCTTCTGCATTCGGCCCC
rJMSF050F12+ TCACATCAAATGCATTTCTAGTTGAAATGTTGGTCCTGGATACCTTCTGCATTCGGCCCC
                      ____________________________________________________________
consensus TCACATCAAATGCATTTCTAGTTGAAATGTTGGTCCTGGATACCTTCTGCATTCGGCCCC
 
. : . : . : . : . : . :
rJMSF016A10+ GTTTATTTTGTTCCTGATTGCTGTATTATAGTATTTTGTTTTTCCTGAAGCTACTTTAGA
rJMSF050F12+ GTTTATTTTGTTCCTGATTGCTGTATTATAGTATTTTGTTTTTCCTGAAGCTACTTTAGA
                      ____________________________________________________________
consensus GTTTATTTTGTTCCTGATTGCTGTATTATAGTATTTTGTTTTTCCTGAAGCTACTTTAGA
 
. : . : . : . : . : . :
rJMSF016A10+ CAAATTTTGTTAGGAGATCAATTTTCTTCAGCTTTGTATTGACAATGAAATTCTTCGATT
rJMSF050F12+ CAAATTTTGTTAGGAGATCAATTTTCTTCAGCTTTGTATTGACAATGAAATTCTTCGATT
                      ____________________________________________________________
consensus CAAATTTTGTTAGGAGATCAATTTTCTTCAGCTTTGTATTGACAATGAAATTCTTCGATT