Contig 005833:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011P01Sequence542009279 (4)ref|XP_011079518.1|5e-59PREDICTED: DNA methyltransferase 1-associated protein 1 [Sesamum indicum]778005833 (2)ref|XP_006349165.1|1e-46PREDICTED: DNA methyltransferase 1-associated protein 1-like [Solanum tuberosum
JMSF049J15Sequence590004435 (2)ref|XP_006348059.1|2e-13PREDICTED: uncharacterized protein LOC102605748 isoform X1 [Solanum tuberosum] 728005833 (2)ref|XP_006349165.1|2e-25PREDICTED: DNA methyltransferase 1-associated protein 1-like [Solanum tuberosum

Alignment

This contig is upended


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rJMFF011P01+                                     TTGAAGCCAAAAGTCCCAACTAAACTNGTATGT
                      ____________________________________________________________
consensus                                        TTGAAGCCAAAAGTCCCAACTAAACTNGTATGT
 
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rJMFF011P01+          GCTGAGCNCCTTGAACTTAGAAAAGAAATATTGACCCTTTTAAATATTCAGAAACAGTTG
                      ____________________________________________________________
consensus             GCTGAGCNCCTTGAACTTAGAAAAGAAATATTGACCCTTTTAAATATTCAGAAACAGTTG
 
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rJMFF011P01+          CAATACAAGGAGGCCGAAGGTTCATCTTATCGTGATGGTTCATATTCTGAAACTCCTGGT
                      ____________________________________________________________
consensus             CAATACAAGGAGGCCGAAGGTTCATCTTATCGTGATGGTTCATATTCTGAAACTCCTGGT
 
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rJMFF011P01+          TCACCGCCGAAGCGGTCACAGCGTGGAGTTGATCAGGATCGAACACTCACTCATGACTTA
                      ____________________________________________________________
consensus             TCACCGCCGAAGCGGTCACAGCGTGGAGTTGATCAGGATCGAACACTCACTCATGACTTA
 
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rJMFF011P01+          AGTTTTGGAGGCGAAAGAGTTGGTAAAAGGGATCAAAAACGGAAGACACCTGGAACTCCC
rJMSF049J15+                                                   GAAGACACCTGGAACTCCC
                      ____________________________________________________________
consensus             AGTTTTGGAGGCGAAAGAGTTGGTAAAAGGGATCAAAAACGGAAGACACCTGGAACTCCC
 
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rJMFF011P01+          AAATTTGAAAGCTCACCAGCAACCTCAAAACGGCCACGGAAGTTGAAATCTTCAGATGGA
rJMSF049J15+          AAATTTGAAAGCTCACCAGCAACCTCAAAACGGCCNCGGAAGTTGAAATCTTCAGATGGA
                      ____________________________________________________________
consensus             AAATTTGAAAGCTCACCAGCAACCTCAAAACGGCCACGGAAGTTGAAATCTTCAGATGGA
 
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rJMFF011P01+          TAGGCTTGGCAGGTGGGAGAAGAGAATTTAATTATTTTTGAAAGAGCGTTGGAGGGAGTC
rJMSF049J15+          TAGGCTTGGCAGGTGGGAGAAGAGAATTTAATTATTTTTGAAAGAGCGTTGGAGGGAGTC
                      ____________________________________________________________
consensus             TAGGCTTGGCAGGTGGGAGAAGAGAATTTAATTATTTTTGAAAGAGCGTTGGAGGGAGTC
 
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rJMFF011P01+          CAGAAAAGTAAAGAAAATGGGTGGTGTTGCAGAAGCAGCAGCTACTAGTCAAGAAAGGGG
rJMSF049J15+          CAGAAAAGTAAAGAAAATGGGTGGTGTTGCAGAAGCAGCAGCTACTAGTCAAGAAAGGGG
                      ____________________________________________________________
consensus             CAGAAAAGTAAAGAAAATGGGTGGTGTTGCAGAAGCAGCAGCTACTAGTCAAGAAAGGGG
 
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rJMFF011P01+          TCGCTGGTTGAGTTGAGGTGTGCAGAGACGAATGTGGAGGCAGCAGGGTAAGAAAAATGA
rJMSF049J15+          TCGCTGGTTGAGTTGAGGTGTGCAGAGACGAATGTGGAGGCAGCAGGGTAAGAAAAATGA
                      ____________________________________________________________
consensus             TCGCTGGTTGAGTTGAGGTGTGCAGAGACGAATGTGGAGGCAGCAGGGTAAGAAAAATGA
 
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rJMFF011P01+          CTTTAGATCAGAAAAATCGTGCTACAATAGTGAAGTCTGAGAAGCACCCATAAAAGAGGG
rJMSF049J15+          CTTTAGATCAGAAAAATCGTGCTACAATAGTGAAGTCTGAGAAGCACCCATAAAAGAGGG
                      ____________________________________________________________
consensus             CTTTAGATCAGAAAAATCGTGCTACAATAGTGAAGTCTGAGAAGCACCCATAAAAGAGGG
 
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rJMFF011P01+          GGAAATGAAAGATTATTGAAGTAAACATTGAATCTCAAATTCCAGGTGAAGAAGAATGGC
rJMSF049J15+          GGAAATGAAAGATTATTGAAGTAAACATTGAATCTCAAATTCCAGGTGAAGAAGAATGGC
                      ____________________________________________________________
consensus             GGAAATGAAAGATTATTGAAGTAAACATTGAATCTCAAATTCCAGGTGAAGAAGAATGGC
 
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rJMFF011P01+          TTTTTTTTGTTGGGTTTCTTATTGATTTTGTCTGTTTTGTTGTATTGC-TTATTACTTCT
rJMSF049J15+          TTTTTTTTGTTGGGTTTCTTATTGATTTTGTCTGTTTTGTTGTANTGCACTATTACTTCT
                      ____________________________________________________________
consensus             TTTTTTTTGTTGGGTTTCTTATTGATTTTGTCTGTTTTGTTGTATTGCATTATTACTTCT
 
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rJMFF011P01+          TCTC--CTATACTATACAATTGGGGATATGGAGGAGCTTTGATGCAAGATTTTGATTGTT
rJMSF049J15+          TCTCCNCATACGTATACAATTGGGGATATGGAGGAGCTCTGANGCAAGNTNTTGATTGTT
                      ____________________________________________________________
consensus             TCTCCNCTTTCGTATACAATTGGGGATATGGAGGAGCTTTGATGCAAGATTTTGATTGTT
 
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rJMFF011P01+          AAGAGGATTCAAGCAAC                                           
rJMSF049J15+          AAGAGGATTCAAGCAACCTNATNTGAAGATNCATGTCTCACAAAAGTGAATGNCCAAAAC
                      ____________________________________________________________
consensus             AAGAGGATTCAAGCAACCTNATNTGAAGATNCATGTCTCACAAAAGTGAATGNCCAAAAC