Contig 005831:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031K13Sequence568005035 (8)ref|XP_008456001.1|2e-112PREDICTED: ATPase family AAA domain-containing protein 1-B-like [Cucumis melo]659005831 (7)ref|XP_007039158.1|8e-75P-loop containing nucleoside triphosphate hydrolases superfamily protein isofor
JMFF047E24Sequence411005035 (8)gb|KGN57645.1|5e-64hypothetical protein Csa_3G238110 [Cucumis sativus]333005831 (7)
JMSF005J07Sequence336005035 (8)ref|XP_010109212.1|199ATPase family AAA domain-containing protein 1-A [Morus notabilis] gb|EXC21392.1|378005831 (7)ref|XP_011084744.1|1e-10PREDICTED: ATPase family AAA domain-containing protein 1 [Sesamum indicum]
JMSF016M02Sequence201005035 (8)emb|CDY19035.1|6e-21BnaC01g20330D [Brassica napus]664005831 (7)ref|XP_007039158.1|3e-79P-loop containing nucleoside triphosphate hydrolases superfamily protein isofor
JMSF044B11Sequence663005035 (8)ref|XP_004145937.1|5e-138PREDICTED: ATPase family AAA domain-containing protein 1-A-like [Cucumis sativu586005831 (7)ref|XP_007039158.1|2e-62P-loop containing nucleoside triphosphate hydrolases superfamily protein isofor
JMSF049F09Sequence689005035 (8)ref|XP_004145937.1|3e-146PREDICTED: ATPase family AAA domain-containing protein 1-A-like [Cucumis sativu736005831 (7)ref|XP_007039158.1|4e-77P-loop containing nucleoside triphosphate hydrolases superfamily protein isofor
JMSF051G24Sequence666005035 (8)ref|XP_004145937.1|7e-139PREDICTED: ATPase family AAA domain-containing protein 1-A-like [Cucumis sativu746005831 (7)ref|XP_007039158.1|6e-97P-loop containing nucleoside triphosphate hydrolases superfamily protein isofor

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF051G24+ TGATCAGNATGCACGAGTGATGGTACTAGCT
                      ____________________________________________________________
consensus TGATCAGNATGCACGAGTGATGGTACTAGCT
 
. : . : . : . : . : . :
rJMSF016M02+ TCTCCCCCAGGCCTTT
rJMSF051G24+ GCAACTAACCGTCCATCAGAGCTTGATGAAGCAATTCTTCGGCGTCTCCCCCAGGCCTTT
rJMFF031K13+ TT
rJMSF049F09+ TCTCCCCCAGGCCTTT
                      ____________________________________________________________
consensus GCAACTAACCGTCCATCAGAGCTTGATGAAGCAATTCTTCGGCGTCTCCCCCAGGCCTTT
 
. : . : . : . : . : . :
rJMSF016M02+ GAGATTGGGATCCCCGAGCGCCGGGAGAGAGTAGAGATACTTAAGGTGATCCTCAGGGGT
rJMSF051G24+ GAGATTGGGATCCCCGAGCGCCGGGAGAGAGTAGAGATACTTAAGGTGATCCTCAGGGGT
rJMSF044B11+ GGGGT
rJMFF031K13+ GAGATTGGGATCCCCGAGCGCCGGGAGAGAGTAGAGATACTTAAGGTGATCCTCAGGGGT
rJMSF049F09+ GAGATTGGGATCCTCGAGCGCCGGGAGAGAGTAGAGATACTTAAGGTGATCCTCAGGGGT
                      ____________________________________________________________
consensus GAGATTGGGATCCCCGAGCGCCGGGAGAGAGTAGAGATACTTAAGGTGATCCTCAGGGGT
 
. : . : . : . : . : . :
rJMSF016M02+ GAGAAGGTTGAGGAAAGCATCGACTACGACTATATAGCTGGTTTATGCGATGGATACACT
rJMSF051G24+ GAGAAGGTTGAGGAAAGCATCGACTACGACTATATAGCTGGTTTATGCGATGGATACACT
rJMSF044B11+ GAGAAGGTTGAGGAAAGCATCGACTACGACTATATAGCTGGTTTATGCGATGGATACACT
rJMFF031K13+ GAGAAGGTTGAGGAAAGCATCGACTACGACTATATAGCTGGTTTATGCGATGGATACACT
rJMSF049F09+ GAGAAGGTTGAGGAAAGCATCGACTACGACTATATAGCTGGTTTATGCGATGGATACACT
                      ____________________________________________________________
consensus GAGAAGGTTGAGGAAAGCATCGACTACGACTATATAGCTGGTTTATGCGATGGATACACT
 
. : . : . : . : . : . :
rJMSF016M02+ GGTTCAGATCTTCTTGATCTCTGCAAGAAAGCTGCATATTTTCCCATCAGGGATCTTCTC
rJMSF051G24+ GGTTCAGATCTTCTTGATCTCTGCAAGAAAGCTGCATATTTTCCCATCAGGGATCTTCTC
rJMSF044B11+ GGTTCAGATCTTCTTGATCTCTGCAAGAAAGCTGCATATTTTCCCATCAGGGATCTTCTC
rJMFF031K13+ GGTTCAGATCTTCTTGATCTCTGCAAGAAAGCTGCATATTTTCCCATCAGGGATCTTCTC
rJMSF049F09+ GGTTCAGATCTTCTTGATCTCTGCAAGAAAGCTGCATATTTTCCCATCAGGGATCTTCTC
                      ____________________________________________________________
consensus GGTTCAGATCTTCTTGATCTCTGCAAGAAAGCTGCATATTTTCCCATCAGGGATCTTCTC
 
. : . : . : . : . : . :
rJMSF016M02+ GATGATGAGAGAAGTGGACGCCCATGTTCAGAGCCGAGGCCATTATCACAAAGCGATTTG
rJMSF051G24+ GATGATGAGAGAAGTGGACGCCCATGTTCAGAGCCGAGGCCATTATCACAAAGCGATTTG
rJMSF044B11+ GATGATGAGAGAAGTGGACGCCCATGTTCAGAGCCGAGGCCATTATCACAAAGCGATTTG
rJMFF031K13+ GATGATGAGAGAAGTGGACGCCCATGTTCAGAGCCGAGGCCATTATCACAAAGCGATTTG
rJMSF049F09+ GATGATGAGAGAAGTGGACGCCCATGTTCAGAGCCGAGGCCATTATCACAAAGCGATTTG
                      ____________________________________________________________
consensus GATGATGAGAGAAGTGGACGCCCATGTTCAGAGCCGAGGCCATTATCACAAAGCGATTTG
 
. : . : . : . : . : . :
rJMSF016M02+ GAGAGAGTTGTATCAACTTCAAAAAACACAAAAGTAGCTGCAAACGAATACAGCAGATTG
rJMSF051G24+ GAGAGAGTTGTATCAACGTCAAAAAACACAAAAGTAGCTGCAAACGAATACAGCAGATTG
rJMSF044B11+ GAGAGAGTTGTATCAACGTCAAAAAACACAAAAGTAGCTGCAAACGAATACAGCAGATTG
rJMFF031K13+ GAGAGAGTTGTATCAACGTCAAAAAACACAAAAGTAGCTGCAAACGAATACAGCAGATTG
rJMSF049F09+ GAGAGAGTTGTATCAACGTCAAAAAACACAAAAGTAGCTGCAAACGAATACAGCAGATTG
                      ____________________________________________________________
consensus GAGAGAGTTGTATCAACGTCAAAAAACACAAAAGTAGCTGCAAACGAATACAGCAGATTG
 
. : . : . : . : . : . :
rJMSF016M02+ AGTTCACAAACATCTGGATGGTCACGGCAGAGGGACCAAGACGATTATCAGGTTCAAGCT
rJMSF051G24+ AGTTCACAAACATCTGGATGGTCACGGCAGAGGGACCAAGACGATTATCAGGTTCAAGCT
rJMSF044B11+ AGTTCACAAACATCTGGATGGTCACGGCAGAGGGACCAAGACGATTATCAGGTTCAAGCT
rJMFF031K13+ AGTTCACAAACATCTGGATGGTCACGGCAGAGGGACCAAGACGATTATCAGGTTCAAGCT
rJMSF005J07+ CTGGATGGTCACGGCAGAGGGACCAAGACGATTATCAGGTTCAAGCT
rJMSF049F09+ AGTTCACAAACATCTGGATGGTCACGGCAGAGGGACCAAGACGATTATCAGGTTCAAGCT
                      ____________________________________________________________
consensus AGTTCACAAACATCTGGATGGTCACGGCAGAGGGACCAAGACGATTATCAGGTTCAAGCT
 
. : . : . : . : . : . :
rJMSF016M02+ GCACTCAGCGAGCTCTCAAAGCTCGTCGTGTCACAGATTATCAACCTGCAGTCTGATTCT
rJMSF051G24+ GCACTCAGCGAGCTCTCAAAGCTCGTCGTGTCACAGATTATCAACCTGCAGTCTGATTCT
rJMSF044B11+ GCACTCAGCGAGCTCTCAAAGCTCGTCGTGTCACAGATTATCAACCTGCAGTCTGATTCT
rJMFF031K13+ GCACTCAGCGAGCTCTCAAAGCTCGTCGTGTCACAGATTATCAACCTGCAGTCTGATTCT
rJMSF005J07+ GCACTCAGCGAGCTCTCAAAGCTCGTCGTGTCACAGATTATCAACCTGCAGTCTGATTCT
rJMFF047E24+ CAGCGAGCTCTCAAAGCTCGTCGTGTCACAGATTATCAACCTGCAGTCTGATTCT
rJMSF049F09+ GCACTCAGCGAGCTCTCAAAGCTCGTCGTGTCACAGATTATCAACCTGCAGTCTGATTCT
                      ____________________________________________________________
consensus GCACTCAGCGAGCTCTCAAAGCTCGTCGTGTCACAGATTATCAACCTGCAGTCTGATTCT
 
. : . : . : . : . : . :
rJMSF016M02+ AACGACTCTTAAACCCCGCCACATTGCATTCACCATACAACAGACGCGTTATTAATGTTG
rJMSF051G24+ AACGACTCTTAAACCCCGCCACATTGCATTCACCATACAACAGACGCGTTATTAATGTTG
rJMSF044B11+ AACGACTCTTAAACCCCGCCACATTGCATTCACCATACAACAGACGCGTTATTAATGTTG
rJMFF031K13+ AACGACTCTTAAACCCCGCCACATTGCATTCACCATACAACAGACGCGTTATTAATGTTG
rJMSF005J07+ AACGACTCTTAAACCCCGCCACATTGCATTCACCATACAACAGACGCGTTATTAATGTTG
rJMFF047E24+ AACGACTCTTAAACCCCGCCACATTGCATTCACCATACAACAGACGCGTTATTAATGTTG
rJMSF049F09+ AACGACTCTTAAACCCCGCCACATTGCATTCACCATACAACAGACGCGTTATTAATGTTG
                      ____________________________________________________________
consensus AACGACTCTTAAACCCCGCCACATTGCATTCACCATACAACAGACGCGTTATTAATGTTG
 
. : . : . : . : . : . :
rJMSF016M02+ TGAAATTTTGTATTGCTATTAGCTAAAGGGGGTGTCCTGGGATTTTAGTTTAAACAGCAA
rJMSF051G24+ TGAAATTTTGTATTGCTATTAGCTAAAGGGGGTGTCCTGGGATTTTAGTTTAAACAGCAA
rJMSF044B11+ TGAAATTTTGTATTGCTATTAGCTAAAGGGGGTGTCCTGGGATTTTAGTTTAAACAGCAA
rJMFF031K13+ TGAAATTTTGTATTGCTATTAGCTAAAGGGGGTGTCCTGGGATTTTAGTTTAAACAGCAA
rJMSF005J07+ TGAAATTTTGTATTGCTATTAGCTAAAGGGGGTGTCCTGGGATTTTAGTTTAAACAGCAA
rJMFF047E24+ TGAAATTTTGTATTGCTATTAGCTAAAGGGGGTGTCCTGGGATTTTAGTTTAAACAGCAA
rJMSF049F09+ TGAAATTTTGTATTGCTATTAGCTAAAGGGGGTGTCCTGGGATTTTAGTTTAAACAGCAA
                      ____________________________________________________________
consensus TGAAATTTTGTATTGCTATTAGCTAAAGGGGGTGTCCTGGGATTTTAGTTTAAACAGCAA
 
. : . : . : . : . : . :
rJMSF016M02+ ACTTCTTTAGTCACCCACGTTCAAAGTTGCTTGATCCGTGATCATTATTCTTGCCTTCTT
rJMSF051G24+ ACTTCTTTAGTCACCCACGTTCAAAGTTGCTTGATCCGTGATCATTATTCTTGCCTTCTT
rJMSF044B11+ ACTTCTTTAGTCACCCACGTTCAAAGTTGCTTGATCCGTGATCATTATTCTTGCCTTCTT
rJMFF031K13+ ACTTCTTTAGTCACCCACGTTCAAAGTTGCTTGATCCGTGATCATTATTCTTGCCTTCTT
rJMSF005J07+ ACTTCTTTAGTCACCCACGTTCAAAGTTGCTTGATCCGTGATCATTATTCTTGCCTTCTT
rJMFF047E24+ ACTTCTTTAGTCACCCACGTTCAAAGTTGCTTGATCCGTGATCATTATTCTTGCCTTCTT
rJMSF049F09+ ACTTCTTTAGTCACCCACGTTCAAAGTTGCTTGATCCGTGATCATTATTCTTGCCTTCTT
                      ____________________________________________________________
consensus ACTTCTTTAGTCACCCACGTTCAAAGTTGCTTGATCCGTGATCATTATTCTTGCCTTCTT
 
. : . : . : . : . : . :
rJMSF016M02+ AGTTGACCTTGCTAAGGTTGTGTAGTTTTT
rJMSF051G24+ AGTTGACCTTGCTAAGGTTGTGTAGTTTTTTGAAAAATATATTATGACTGAACTC
rJMSF044B11+ AGTTGACCTTGCTAAGGTTGTGTAGTTTTTTGAAAAATATA
rJMFF031K13+ AGTTGACCTTGCTAAGGTTGTGTAGTTTTTTGAAAAATATATTATGACTGAACTCTA
rJMSF005J07+ AGTTGACCTTGCTAAGGTTGTGTAGTTTTTTGAAAAATATATTATGACTGAACTCTATGA
rJMFF047E24+ AGTTGACCTTGCTAAGGTTGTGTAGTTTTTTGAAAAATATATTATGACTGAACTCTATGA
rJMSF049F09+ AGTTGACCTTGCTAAGGTTGTGTAGTTTTTTGAAAAATATATTATGACTGAACTCTATGA
                      ____________________________________________________________
consensus AGTTGACCTTGCTAAGGTTGTGTAGTTTTTTGAAAAATATATTATGACTGAACTCTATGA
 
. : . : . : . : . : . :
rJMSF005J07+ AGTATGAGGATTTGACTTT
rJMFF047E24+ AGTATGAGGATTTGACTTT
rJMSF049F09+ AGTATGAGGATTTGACTTTTGGAAGAGATTCTCTTTACAAATCCATCATTAGAAATTAAA
                      ____________________________________________________________
consensus AGTATGAGGATTTGACTTTTGGAAGAGATTCTCTTTACAAATCCATCATTAGAAATTAAA