Contig 005824:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008H03Sequence623005824 (5)ref|XP_006354611.1|3e-107PREDICTED: protoheme IX farnesyltransferase, mitochondrial-like [Solanum tubero
JMFN032M12Sequence607005824 (5)ref|XP_006354611.1|1e-111PREDICTED: protoheme IX farnesyltransferase, mitochondrial-like [Solanum tubero
JMSF020P18Sequence684009548 (3)ref|XP_004229507.1|8e-64PREDICTED: protoheme IX farnesyltransferase, mitochondrial [Solanum lycopersicu743005824 (5)ref|XP_006354611.1|2e-105PREDICTED: protoheme IX farnesyltransferase, mitochondrial-like [Solanum tubero
JMSF028B05Sequence675009548 (3)ref|XP_004229507.1|7e-64PREDICTED: protoheme IX farnesyltransferase, mitochondrial [Solanum lycopersicu746005824 (5)ref|XP_006354611.1|4e-106PREDICTED: protoheme IX farnesyltransferase, mitochondrial-like [Solanum tubero
JMSF047L12Sequence688009548 (3)ref|XP_004229507.1|2e-61PREDICTED: protoheme IX farnesyltransferase, mitochondrial [Solanum lycopersicu739005824 (5)ref|XP_006354611.1|9e-83PREDICTED: protoheme IX farnesyltransferase, mitochondrial-like [Solanum tubero

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN032M12- TCGGTGCT
                      ____________________________________________________________
consensus TCGGTGCT
 
. : . : . : . : . : . :
JMFN032M12- ATCCCACCACTTCTTGGGTGGGCTGCAGCATCTGGTCAGGTGTCGCTAAATTCCATGATT
JMFN008H03- GGGTGGGCTGCAGCATCTGGTCAGGTGTCGCTAAATTCCATGATT
rJMSF028B05+ GGGTGGGCTGCAGCATCTGGTCAGGTGTCGCTAAATTCCATGATT
rJMSF020P18+ GGGTGGGCTGCAGCATCTGGTCAGGTGTCGCTAAATTCCATGATT
                      ____________________________________________________________
consensus ATCCCACCACTTCTTGGGTGGGCTGCAGCATCTGGTCAGGTGTCGCTAAATTCCATGATT
 
. : . : . : . : . : . :
JMFN032M12- CTCCCGGCTGCTCTATATTTTTGGCAAATACCCCATTTCATGGCCTTAGCATACTTGTGC
JMFN008H03- CTCCCGGCTGCTCTATATTTTTGGCAAATACCCCATTTCATGGCCTTAGCATACTTGTGC
rJMSF028B05+ CTCCCGGCTGCTCTATATTTTTGGCAAATACCCCATTTCATGGCCTTAGCATACTTGTGC
rJMSF020P18+ CTCCCGGCTGCTCTATATTTTTGGCAAATACCCCATTTCATGGCCTTAGCATACTTGTGC
rJMSF047L12+ GGCCTTAGCATACTTGTGC
                      ____________________________________________________________
consensus CTCCCGGCTGCTCTATATTTTTGGCAAATACCCCATTTCATGGCCTTAGCATACTTGTGC
 
. : . : . : . : . : . :
JMFN032M12- CGCAAGGATTATGCAGATGGAGGGTTTAGGATGTTTTCCCTGGCTGATGCTTCTGGTCTG
JMFN008H03- CGCAAGGATTATGCAGATGGAGGGTTTAGGATGTTTTCCCTGGCTGATGCTTCTGGTCTG
rJMSF028B05+ CGCAAGGATTATGCAGATGGAGGGTTTAGGATGTTTTCCCTGGCTGATGCTTCTGGTCTG
rJMSF020P18+ CGCAAGGATTATGCAGATGGAGGGTTTAGGATGTTTTCCCTGGCTGATGCTTCTGGTCTG
rJMSF047L12+ CGCAAGGATTATGCAGATGGAGGGTTTAGGATGTTTTCCCTGGCTGATGCTTCTGGTCTG
                      ____________________________________________________________
consensus CGCAAGGATTATGCAGATGGAGGGTTTAGGATGTTTTCCCTGGCTGATGCTTCTGGTCTG
 
. : . : . : . : . : . :
JMFN032M12- AGAACAGCTTCAGTGTCCTTAAGGAATTGCCTGTATTTACTTCCACTTGGTTATCTAGCC
JMFN008H03- AGAACAGCTTCAGTGTCCTTAAGGAATTGCCTGTATTTACTTCCACTTGGTTATCTAGCC
rJMSF028B05+ AGAACAGCTTCAGTGTCCTTAAGGAATTGCCTGTATTTACTTCCACTTGGTTATCTAGCC
rJMSF020P18+ AGAACAGCTTCAGTGTCCTTAAGGAATTGCCTGTATTTACTTCCACTTGGTTATCTGGCC
rJMSF047L12+ AGAACAGCTTCAGTGTCCTTAAGGAATTGCCTGTATTTACTTCCACTTGGTTATCTAGCC
                      ____________________________________________________________
consensus AGAACAGCTTCAGTGTCCTTAAGGAATTGCCTGTATTTACTTCCACTTGGTTATCTAGCC
 
. : . : . : . : . : . :
JMFN032M12- TATGATTGGGGATTGACTTCAGGGTGGTTCTGCCTTGAGTCCACACTTCTTGCTCTTGCC
JMFN008H03- TATGATTGGGGATTGACTTCAGGGTGGTTCTGCCTTGAGTCCACACTTCTTGCTCTTGCC
rJMSF028B05+ TATGATTGGGGATTGACTTCAGGGTGGTTCTGCCTTGAGTCCACACTTCTTGCTCTTGCC
rJMSF020P18+ TATGATTGGGGATTGACTTCAGGGTGGTTCTGCCTTGAGTCCACACTTCTTGCTCTTGCC
rJMSF047L12+ TATGATTGGGGATTGACTTCAGGGTGGTTCTGCCTTGAGTCCACACTTCTTGCTCTTGCC
                      ____________________________________________________________
consensus TATGATTGGGGATTGACTTCAGGGTGGTTCTGCCTTGAGTCCACACTTCTTGCTCTTGCC
 
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JMFN032M12- ATCAGCAGTACGGCAACATCATTCTACTTCAACCGCACAACAAAAGGTGCCAGGAGAATG
JMFN008H03- ATCAGCAGTACGGCAACATCATTCTACTTCAACCGCACAACAAAAGGTGCCAGGAGAATG
rJMSF028B05+ ATCAGCAGTACGGCAACATCATTCTACTTCAACCGCACAACAAAAGGTGCCAGGAGAATG
rJMSF020P18+ ATCAGCAGTACGGCAACATCATTCTACTTCAACCGCACAACAAAAGGTGCCAGGAGAATG
rJMSF047L12+ ATCAGCAGTACGGCAACATCATTCTACTTCAACCGCACAACAAAAGGTGCCAGGAGAATG
                      ____________________________________________________________
consensus ATCAGCAGTACGGCAACATCATTCTACTTCAACCGCACAACAAAAGGTGCCAGGAGAATG
 
. : . : . : . : . : . :
JMFN032M12- TTCCATGCCAGCCTTCTCTATCTTCCCGTATTTATGTCTGGGCTTCTATTTCATCGTATA
JMFN008H03- TTCCATGCCAGCCTTCTCTATCTTCCCGTATTTATGTCTGGGCTTCTATTTCATCGTATA
rJMSF028B05+ TTCCATGCCAGCCTTCTCTATCTTCCCGTATTTATGTCTGGGCTTCTATTTCATCGTATA
rJMSF020P18+ TTCCATGCCAGCCTTCTCTATCTTCCCGTATTTATGTCTGGGCTTCTATTTCATCGTATA
rJMSF047L12+ TTCCATGCCAGCCTTCTCTATCTTCCCGTATTTATGTCTGGGCTTCTATTTCATCGTATA
                      ____________________________________________________________
consensus TTCCATGCCAGCCTTCTCTATCTTCCCGTATTTATGTCTGGGCTTCTATTTCATCGTATA
 
. : . : . : . : . : . :
JMFN032M12- GATAACGAGCAACAGGCGACTGTGGAGAACCCTCATAAGATAACAGAACTCTCATATTCC
JMFN008H03- GATAACGAGCAACAGGCGACTGTGGAGAACCCTCATAAGATAACAGAACTCTCATATTCC
rJMSF028B05+ GATAACGAGCAACAGGCGACTGTGGAGAACCCTCATAAGATAACAGAACTCTCATATTCC
rJMSF020P18+ GATAACGAGCAACAGGCGACTGTGGAGAACCCTCATAAGATAACAGAACTCTCATATTCC
rJMSF047L12+ GATAACGAGCAACAGGCGACTGTGGAGAACCCTCATAAGATAACAGAACTCTCATATTCC
                      ____________________________________________________________
consensus GATAACGAGCAACAGGCGACTGTGGAGAACCCTCATAAGATAACAGAACTCTCATATTCC
 
. : . : . : . : . : . :
JMFN032M12- TCAGAAAACACAGTGTTGTTGACACGGCAAAAGAGAGGCAATGCACAACCACGCCCACCC
JMFN008H03- TCAGAAAACACAGTGTTGTTGACACGGCAAAAGAGAGGCAATGCACAACCACGCCCACCC
rJMSF028B05+ TCAGAAAACACAGTGTTGTTGACACGGCAAAAGAGAGGCAATGCACAACCACGCCCACCC
rJMSF020P18+ TCAGAAAACACAGTGTTGTTGACACGGCAAAAGAGAGGCAATGCACAACCACGCCCACCC
rJMSF047L12+ TCAGAAAACACAGTGTTGTTGACACGGCAAAAGAGAGGCAATGCACAACCACGCCCACCC
                      ____________________________________________________________
consensus TCAGAAAACACAGTGTTGTTGACACGGCAAAAGAGAGGCAATGCACAACCACGCCCACCC
 
. : . : . : . : . : . :
JMFN032M12- GTAGCATATGCTTCAGTTGCTCCATTTCCTTTCTTGCCAGCTCCTTCATACGCCATGTC
JMFN008H03- GTAGCATATGCTTCAGTTGCTCCATTTCCTTTCTTGCCAGCTCCTTCATACGCCATGTCT
rJMSF028B05+ GTAGCATATGCTTCAGTTGCTCCATTTCCTTTCTTGCCAGCTCCTTCATACGCCATGTCT
rJMSF020P18+ GTAGCATATGCTTCAGTTGCTCCATTTCCTTTCTTGCCAGCTCCTTCATACGCCATGTCT
rJMSF047L12+ GTAGCATATGCTTCAGTTGCTCCATTTCCTTTCTTGCCAGCTCCTTCATACGCCATGTCT
                      ____________________________________________________________
consensus GTAGCATATGCTTCAGTTGCTCCATTTCCTTTCTTGCCAGCTCCTTCATACGCCATGTCT
 
. : . : . : . : . : . :
JMFN008H03- GAATCTTGAGTCTCTGTATTTATATTTTTGAA
rJMSF028B05+ GAATCTTGAGTCTCTGTATTTATATTTTTGAATAAAGACATCCATCAGCTGCTGTGAAGA
rJMSF020P18+ GAATCTTGAGTCTCTGTATTTATATTTTTGAATAAAGACATCCATCAGCTGCTGTGAAGA
rJMSF047L12+ GAATCTTGAGTCTCTGTATTTATATTTTTGAATAAAGACATCCATCAGCTGCTGTGAAGA
                      ____________________________________________________________
consensus GAATCTTGAGTCTCTGTATTTATATTTTTGAATAAAGACATCCATCAGCTGCTGTGAAGA
 
. : . : . : . : . : . :
rJMSF028B05+ TGCAGTGATTTTGCTATTCTAAACATGAATTATTTCATCAATTTTGATCCCAGCAGTATA
rJMSF020P18+ TGCAGTGATTTTGCTATTCTAAACATGAATTATTTCATCAATTTTGATCCCAGCAGTATA
rJMSF047L12+ TGCAGTGATTTTGCTATTCTAAACATGAATTATTTCATCAATTTTGATCCCAGCAGTATA
                      ____________________________________________________________
consensus TGCAGTGATTTTGCTATTCTAAACATGAATTATTTCATCAATTTTGATCCCAGCAGTATA
 
. : . : . : . : . : . :
rJMSF028B05+ TTACACAATAATGCTTGTAAC
rJMSF020P18+ TTACACAATAATGCTTGTAAC
rJMSF047L12+ TTACACAATAATGCTTGTAACAGTTGTAACAATCTTTGTTTTGATTTGATACAAGATACC
                      ____________________________________________________________
consensus TTACACAATAATGCTTGTAACAGTTGTAACAATCTTTGTTTTGATTTGATACAAGATACC
 
. : . : . : . : . : . :
rJMSF047L12+ TTCCAATTGGCTCCTACCTGATTTTGATATTTGTGTGAATCATCACTATAATATATGAAT
                      ____________________________________________________________
consensus TTCCAATTGGCTCCTACCTGATTTTGATATTTGTGTGAATCATCACTATAATATATGAAT