clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF023E01 | Sequence | 326 | 010903 (11) | 576 | 005823 (6) | gb|AHL84159.1| | 3e-71 | cysteine synthase [Nicotiana tabacum] | |||
JMSF010M20 | Sequence | 278 | 010903 (11) | ref|XP_009768645.1| | 3e-07 | PREDICTED: cysteine synthase, chloroplastic/chromoplastic [Nicotiana sylvestris | 835 | 005823 (6) | ref|XP_008800744.1| | 4e-51 | PREDICTED: cysteine synthase-like [Phoenix dactylifera] |
JMSF015J11 | Sequence | 414 | 010903 (11) | ref|XP_009768645.1| | 1e-38 | PREDICTED: cysteine synthase, chloroplastic/chromoplastic [Nicotiana sylvestris | 389 | 005823 (6) | dbj|BAD93958.1| | 1e-28 | cysteine synthase [Arabidopsis thaliana] |
JMSF042C03 | Sequence | 269 | 005823 (6) | gb|KHG11750.1| | 0.001 | Cysteine synthase, chloroplastic/chromoplastic [Gossypium arboreum] | 227 | 010903 (11) | gb|KHG11750.1| | 7e-04 | Cysteine synthase, chloroplastic/chromoplastic [Gossypium arboreum] |
JMSF047I12 | Sequence | 723 | 010903 (11) | ref|XP_009592252.1| | 4e-94 | PREDICTED: cysteine synthase, chloroplastic/chromoplastic [Nicotiana tomentosif | 763 | 005823 (6) | ref|XP_008800744.1| | 2e-51 | PREDICTED: cysteine synthase-like [Phoenix dactylifera] |
JMSF050M09 | Sequence | 652 | 005823 (6) | 719 | 015187 | gb|ACC86121.1| | 7e-32 | O-acetylserine(thiol)lyase [Knorringia sibirica] |
This contig is upended
. : . : . : . : . : . :
JMSF050M09- GTTAGGCGTTCCTCGGGCGCTCGGGGGCACCTGGCGCC
____________________________________________________________
consensus GTTAGGCGTTCCTCGGGCGCTCGGGGGCACCTGGCGCC
. : . : . : . : . : . :
JMSF050M09- TAGGCGGCGATTAATCAGCCTAGGCACCTGTGTATTTTTTATTTTATTTTTAAAAAAAAT
____________________________________________________________
consensus TAGGCGGCGATTAATCAGCCTAGGCACCTGTGTATTTTTTATTTTATTTTTAAAAAAAAT
. : . : . : . : . : . :
JMSF050M09- TTGTTTATTTTTTTTTAAAATTTTTTTTAAGACTTGATAATTATAAACTATTTAATACTT
____________________________________________________________
consensus TTGTTTATTTTTTTTTAAAATTTTTTTTAAGACTTGATAATTATAAACTATTTAATACTT
. : . : . : . : . : . :
JMSF050M09- TAATAGATAATACTAAAATATTAAATATTAACCTAAAAAATATCTAGAGTTTGAACAATT
____________________________________________________________
consensus TAATAGATAATACTAAAATATTAAATATTAACCTAAAAAATATCTAGAGTTTGAACAATT
. : . : . : . : . : . :
JMSF050M09- TAGCATTATTTCGTTCAAAAACGATGTCGTTTTGAGTGAAATAACTTATTTAAAAAAGAA
____________________________________________________________
consensus TAGCATTATTTCGTTCAAAAACGATGTCGTTTTGAGTGAAATAACTTATTTAAAAAAGAA
. : . : . : . : . : . :
JMSF050M09- GGGAACAATAGCTAATCGGCCGACTAGGTCGACTTTAATAGATAATACTGAAATATTAAA
rJMSF010M20+ GGAACCATAGCTAATCGNCCGACTANGTCGACTTTAATAGATAATACTGAAATATTAAA
____________________________________________________________
consensus GGGAACCATAGCTAATCGGCCGACTAGGTCGACTTTAATAGATAATACTGAAATATTAAA
. : . : . : . : . : . :
JMSF050M09- TATTAACCTAAAAAACATCTATAGTTTGGACAATTTAGGGTTATTTTGCTCAAAACGATG
rJMSF010M20+ TATTAACCTAAAAAACATCTATAGTTTGGACAATTTAGGGTTATTTTGCTCAAAACGATG
rJMSF047I12+ TTGGACAATTTAGGGTTATTTTGCTCAAAACGATG
____________________________________________________________
consensus TATTAACCTAAAAAACATCTATAGTTTGGACAATTTAGGGTTATTTTGCTCAAAACGATG
. : . : . : . : . : . :
JMSF050M09- TCGTTTTGAGTGAAATAACCCATTTAAAAAAGAAGGGAACAATAGCTAATCGGTTGACTA
rJMSF010M20+ TCGTTTTGAGTGAAATAACCCATTTAAAAAAGAAGGGAACAATAGCTAATCGGTTGACTA
rJMSF047I12+ TCGTTTTGAGTGAAATAACCCATTTAAAAAAGAAGGGAACAATAGCTAATCGGTTGACTA
____________________________________________________________
consensus TCGTTTTGAGTGAAATAACCCATTTAAAAAAGAAGGGAACAATAGCTAATCGGTTGACTA
. : . : . : . : . : . :
JMSF050M09- GGCGACCTAGTCGGTGCCTAGGTGGTACGCTAGGTGGCCGGCCAGCGCGCCTAGCGTCTA
rJMSF010M20+ GGCGACCTAGTCGGTGCCTAGGTGGTACGCTAGGTGGCCGGCCAGCGCGCCTAGCGTCTA
rJMSF047I12+ GGCGACCTAGTCGGTGCCTAGGTGGTACGCTAGGTGGCCGGCCAGCGCGCCTAGCGTCTA
____________________________________________________________
consensus GGCGACCTAGTCGGTGCCTAGGTGGTACGCTAGGTGGCCGGCCAGCGCGCCTAGCGTCTA
. : . : . : . : . : . :
JMSF050M09- GGCGCCGATTAATCGGTGCCTAGGCGGGATTTTTGCAACATTCATTTTCATGTTTTGAAG
rJMSF010M20+ GGCGCCGATTAATCGGTGCCTAGGCGGGATTTTTGCAACATTCATTTTCATGTTTTGAAG
rJMSF047I12+ GGCGCCGATTAATCGGTGCCTAGGCGGGATTTTTGCAACATTCATTTTCATGTTTTGAAG
____________________________________________________________
consensus GGCGCCGATTAATCGGTGCCTAGGCGGGATTTTTGCAACATTCATTTTCATGTTTTGAAG
. : . : . : . : . : . :
JMSF050M09- CCTTCTTCTAGTTTACTGCAATTTAAAATTGCAGGCCCTCACAAAATTCANGGGATTGGG
rJMSF015J11+ GGCCCTCACNNAATTCAAGGGANNGGG
rJMSF010M20+ CCTTCTTCTAGTTTACTGCAATTTAAAATTGCAGGCCCTCACAAAATTCAAGGGATTGGG
rJMFF023E01+ GGCCCTCACAAAATTCAAGGGATTGGG
rJMSF047I12+ CCTTCTTCTAGTTTACTGCAATTTAAAATTGCAGGCCCTCACAAAATTCAAGGGATTGGG
____________________________________________________________
consensus CCTTCTTCTAGTTTACTGCAATTTAAAATTGCAGGCCCTCACAAAATTCAAGGGATTGGG
. : . : . : . : . : . :
JMSF050M09- GCAGGTTTTATTCC
rJMSF015J11+ GCAGGTNTTATTCCAAGAAATTTAGANCAAGAAGTGGTGGACGAAGTAATAGNGATATCA
rJMSF010M20+ GCAGGTTTTATTCCAAGAAATTTAGATCAAGAAGTGGTGGACGAAGTAATAGAGATATCA
rJMFF023E01+ GCAGGTTTTATTCCAAGAAATTTAGATCAAGAAGTGGTGGACGAAGTAATAGAGATATCA
rJMSF047I12+ GCAGGTTTTATTCCAAGAAATTTAGATCAAGAAGTGGTGGACGAAGTAATAGAGATATCA
____________________________________________________________
consensus GCAGGTTTTATTCCAAGAAATTTAGATCAAGAAGTGGTGGACGAAGTAATAGAGATATCA
. : . : . : . : . : . :
rJMSF015J11+ NGTGANGTANCTGTNGAAACTGCGAANCANTTANCAGTTAAAGAAGGATTGCTGGTGGGC
rJMSF010M20+ AGTGATGTAGCTGTTGAAACTGCGAAGCAATTAGCAGTTAAAGAAGGATTGCTGGTGGGC
rJMFF023E01+ AGTGATGTAGCTGTTGAAACTGCGAAGCAATTAGCAGTTAAAGAAGGATTGCTGGTGGGC
rJMSF047I12+ AGTGATGTAGCTGTTGAAACTGCGAAGCAATTAGCAGTTAAAGAAGGATTGCTGGTGGGC
____________________________________________________________
consensus AGTGATGTAGCTGTTGAAACTGCGAAGCAATTAGCAGTTAAAGAAGGATTGCTGGTGGGC
. : . : . : . : . : . :
rJMSF015J11+ ATTTCCTCGGGAGCAGCTGCAGCTGCTGCAATAGAGGTNGCAAAGCGACCTGAGNATGCG
rJMSF010M20+ ATTTCCTCGGGAGCAGCTGCAGCTGCTGCAATAGAGGTTGCAAAGCGACCTGAGAATGCG
rJMFF023E01+ ATTTCCTCGGGGGCAGCTGCAGCTGCTGCAATAGAGGTTGCAAAGCGACCTGAGAATGCG
rJMSF047I12+ ATTTCCTCGGGAGCAGCTGCAGCTGCTGCAATAGAGGTTGCAAAGCGACCTGAGAATGCG
____________________________________________________________
consensus ATTTCCTCGGGAGCAGCTGCAGCTGCTGCAATAGAGGTTGCAAAGCGACCTGAGAATGCG
. : . : . : . : . : . :
rJMSF015J11+ GGAAAGCTTATTGCGGTTGTTTTCCCGAGCTTTGGGGAGCGGTCTCTATCGATGTATACT
rJMSF010M20+ GGAAAGCTTATTGCGGTTGTTTTCCCGAGCTTTGGGGAGCGGTATCTATCGA-GTATACT
rJMFF023E01+ GGAAAGCTTATTGCGGTTGTTTTCCCGAGCTTTGGGGAGCGGTATCTATCGA-GTATACT
JMSF042C03- GGTATCTATCGA-GTATACT
rJMSF047I12+ GGAAAGCTTATTGCGGTTGTTTTCCCGAGCTTTGGGGAGCGGTATCTATCGA-GTATACT
____________________________________________________________
consensus GGAAAGCTTATTGCGGTTGTTTTCCCGAGCTTTGGGGAGCGGTATCTATCGA-GTATACT
. : . : . : . : . : . :
rJMSF015J11+ TTTCCAATCGATTCGGGATGANTGCGAAAAAATGCAACCGGAGTGAGCATATNGATTNNG
rJMSF010M20+ TTTCCAATCGATTCGGGATGAATGCGAAAAAATGCAACCGGAGTGAGCATATTGATTTTG
rJMFF023E01+ TTTCCAATCGATTCGGGATGAATGCGAAAAAATGCAACCGGAGTGAGCATATTGATTTTG
JMSF042C03- TTTCCAATCGATTCGGGATGAATGCGAAAAAATGCAACCGGAGTGAGCATATTGATTTTG
rJMSF047I12+ TTTCCAATCGATTCGGGATGAATGCGAAAAAATGCAACCGGAGTGAGCATATTGATTTTG
____________________________________________________________
consensus TTTCCAATCGATTCGGGATGAATGCGAAAAAATGCAACCGGAGTGAGCATATTGATTTTG
. : . : . : . : . : . :
rJMSF015J11+ AAGNGATNTCCTGAACGCAA
rJMSF010M20+ AAGTGATTTCCTGAACGCAAATAAAAACAAATTTTGATGAATTTTTGTTATAGTTTGGTG
rJMFF023E01+ AAGTGATTTCCTGAACGCAAATAAAAACAAATTTTGATGAATTTTTGTTATAGTTTGGTG
JMSF042C03- AAGTGATTTCCTGAACGCAAATAAAAACAAATTTTGATGAATTTTTGTTATAGTTTGGTG
rJMSF047I12+ AAGTGATTTCCTGAACGCAAATAAAAACAAATTTTGATGAATTTTTGTTATAGTTTGGTG
____________________________________________________________
consensus AAGTGATTTCCTGAACGCAAATAAAAACAAATTTTGATGAATTTTTGTTATAGTTTGGTG
. : . : . : . : . : . :
rJMSF010M20+ GGTTGTTGCATAATCAACTTGTAATTCAGAACTAAATGATCTCTGGTGTAATTTTTCTTT
rJMFF023E01+ GATTGTTGCATAATCAACTTGTAATTCAGAACTAAATGATCTCTGGTGTAATTTTTC-TT
JMSF042C03- GATTGTTGCATAATCAACTTGTAATTCAGAACTAAATGATCTCTGGTGTAATTTTTCTTT
rJMSF047I12+ GATTGTTGCATAATCAACTTGTAATTCAGAACTAAATGATCTCTGGTGTAATTTTTCTTT
____________________________________________________________
consensus GATTGTTGCATAATCAACTTGTAATTCAGAACTAAATGATCTCTGGTGTAATTTTTCTTT
. : . : . : . : . : . :
rJMSF010M20+ GTGCTACATT
rJMFF023E01+ GTGCTACATTTGTTGGCAAAGTTGATTATACT
JMSF042C03- GTGCTACATTTGTTGGCAAAGTTGATTATACTCTAAC
rJMSF047I12+ GTGCTACATTTGTTGGCAAAGTTGATTATACTCTAACTAAAGTGGACTTAATACCCGATT
____________________________________________________________
consensus GTGCTACATTTGTTGGCAAAGTTGATTATACTCTAACTAAAGTGGACTTAATACCCGATT