Contig 005823:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023E01Sequence326010903 (11)576005823 (6)gb|AHL84159.1|3e-71cysteine synthase [Nicotiana tabacum]
JMSF010M20Sequence278010903 (11)ref|XP_009768645.1|3e-07PREDICTED: cysteine synthase, chloroplastic/chromoplastic [Nicotiana sylvestris835005823 (6)ref|XP_008800744.1|4e-51PREDICTED: cysteine synthase-like [Phoenix dactylifera]
JMSF015J11Sequence414010903 (11)ref|XP_009768645.1|1e-38PREDICTED: cysteine synthase, chloroplastic/chromoplastic [Nicotiana sylvestris389005823 (6)dbj|BAD93958.1|1e-28cysteine synthase [Arabidopsis thaliana]
JMSF042C03Sequence269005823 (6)gb|KHG11750.1|0.001Cysteine synthase, chloroplastic/chromoplastic [Gossypium arboreum]227010903 (11)gb|KHG11750.1|7e-04Cysteine synthase, chloroplastic/chromoplastic [Gossypium arboreum]
JMSF047I12Sequence723010903 (11)ref|XP_009592252.1|4e-94PREDICTED: cysteine synthase, chloroplastic/chromoplastic [Nicotiana tomentosif763005823 (6)ref|XP_008800744.1|2e-51PREDICTED: cysteine synthase-like [Phoenix dactylifera]
JMSF050M09Sequence652005823 (6)719015187gb|ACC86121.1|7e-32O-acetylserine(thiol)lyase [Knorringia sibirica]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF050M09- GTTAGGCGTTCCTCGGGCGCTCGGGGGCACCTGGCGCC
                      ____________________________________________________________
consensus GTTAGGCGTTCCTCGGGCGCTCGGGGGCACCTGGCGCC
 
. : . : . : . : . : . :
JMSF050M09- TAGGCGGCGATTAATCAGCCTAGGCACCTGTGTATTTTTTATTTTATTTTTAAAAAAAAT
                      ____________________________________________________________
consensus TAGGCGGCGATTAATCAGCCTAGGCACCTGTGTATTTTTTATTTTATTTTTAAAAAAAAT
 
. : . : . : . : . : . :
JMSF050M09- TTGTTTATTTTTTTTTAAAATTTTTTTTAAGACTTGATAATTATAAACTATTTAATACTT
                      ____________________________________________________________
consensus TTGTTTATTTTTTTTTAAAATTTTTTTTAAGACTTGATAATTATAAACTATTTAATACTT
 
. : . : . : . : . : . :
JMSF050M09- TAATAGATAATACTAAAATATTAAATATTAACCTAAAAAATATCTAGAGTTTGAACAATT
                      ____________________________________________________________
consensus TAATAGATAATACTAAAATATTAAATATTAACCTAAAAAATATCTAGAGTTTGAACAATT
 
. : . : . : . : . : . :
JMSF050M09- TAGCATTATTTCGTTCAAAAACGATGTCGTTTTGAGTGAAATAACTTATTTAAAAAAGAA
                      ____________________________________________________________
consensus TAGCATTATTTCGTTCAAAAACGATGTCGTTTTGAGTGAAATAACTTATTTAAAAAAGAA
 
. : . : . : . : . : . :
JMSF050M09- GGGAACAATAGCTAATCGGCCGACTAGGTCGACTTTAATAGATAATACTGAAATATTAAA
rJMSF010M20+ GGAACCATAGCTAATCGNCCGACTANGTCGACTTTAATAGATAATACTGAAATATTAAA
                      ____________________________________________________________
consensus GGGAACCATAGCTAATCGGCCGACTAGGTCGACTTTAATAGATAATACTGAAATATTAAA
 
. : . : . : . : . : . :
JMSF050M09- TATTAACCTAAAAAACATCTATAGTTTGGACAATTTAGGGTTATTTTGCTCAAAACGATG
rJMSF010M20+ TATTAACCTAAAAAACATCTATAGTTTGGACAATTTAGGGTTATTTTGCTCAAAACGATG
rJMSF047I12+ TTGGACAATTTAGGGTTATTTTGCTCAAAACGATG
                      ____________________________________________________________
consensus TATTAACCTAAAAAACATCTATAGTTTGGACAATTTAGGGTTATTTTGCTCAAAACGATG
 
. : . : . : . : . : . :
JMSF050M09- TCGTTTTGAGTGAAATAACCCATTTAAAAAAGAAGGGAACAATAGCTAATCGGTTGACTA
rJMSF010M20+ TCGTTTTGAGTGAAATAACCCATTTAAAAAAGAAGGGAACAATAGCTAATCGGTTGACTA
rJMSF047I12+ TCGTTTTGAGTGAAATAACCCATTTAAAAAAGAAGGGAACAATAGCTAATCGGTTGACTA
                      ____________________________________________________________
consensus TCGTTTTGAGTGAAATAACCCATTTAAAAAAGAAGGGAACAATAGCTAATCGGTTGACTA
 
. : . : . : . : . : . :
JMSF050M09- GGCGACCTAGTCGGTGCCTAGGTGGTACGCTAGGTGGCCGGCCAGCGCGCCTAGCGTCTA
rJMSF010M20+ GGCGACCTAGTCGGTGCCTAGGTGGTACGCTAGGTGGCCGGCCAGCGCGCCTAGCGTCTA
rJMSF047I12+ GGCGACCTAGTCGGTGCCTAGGTGGTACGCTAGGTGGCCGGCCAGCGCGCCTAGCGTCTA
                      ____________________________________________________________
consensus GGCGACCTAGTCGGTGCCTAGGTGGTACGCTAGGTGGCCGGCCAGCGCGCCTAGCGTCTA
 
. : . : . : . : . : . :
JMSF050M09- GGCGCCGATTAATCGGTGCCTAGGCGGGATTTTTGCAACATTCATTTTCATGTTTTGAAG
rJMSF010M20+ GGCGCCGATTAATCGGTGCCTAGGCGGGATTTTTGCAACATTCATTTTCATGTTTTGAAG
rJMSF047I12+ GGCGCCGATTAATCGGTGCCTAGGCGGGATTTTTGCAACATTCATTTTCATGTTTTGAAG
                      ____________________________________________________________
consensus GGCGCCGATTAATCGGTGCCTAGGCGGGATTTTTGCAACATTCATTTTCATGTTTTGAAG
 
. : . : . : . : . : . :
JMSF050M09- CCTTCTTCTAGTTTACTGCAATTTAAAATTGCAGGCCCTCACAAAATTCANGGGATTGGG
rJMSF015J11+ GGCCCTCACNNAATTCAAGGGANNGGG
rJMSF010M20+ CCTTCTTCTAGTTTACTGCAATTTAAAATTGCAGGCCCTCACAAAATTCAAGGGATTGGG
rJMFF023E01+ GGCCCTCACAAAATTCAAGGGATTGGG
rJMSF047I12+ CCTTCTTCTAGTTTACTGCAATTTAAAATTGCAGGCCCTCACAAAATTCAAGGGATTGGG
                      ____________________________________________________________
consensus CCTTCTTCTAGTTTACTGCAATTTAAAATTGCAGGCCCTCACAAAATTCAAGGGATTGGG
 
. : . : . : . : . : . :
JMSF050M09- GCAGGTTTTATTCC
rJMSF015J11+ GCAGGTNTTATTCCAAGAAATTTAGANCAAGAAGTGGTGGACGAAGTAATAGNGATATCA
rJMSF010M20+ GCAGGTTTTATTCCAAGAAATTTAGATCAAGAAGTGGTGGACGAAGTAATAGAGATATCA
rJMFF023E01+ GCAGGTTTTATTCCAAGAAATTTAGATCAAGAAGTGGTGGACGAAGTAATAGAGATATCA
rJMSF047I12+ GCAGGTTTTATTCCAAGAAATTTAGATCAAGAAGTGGTGGACGAAGTAATAGAGATATCA
                      ____________________________________________________________
consensus GCAGGTTTTATTCCAAGAAATTTAGATCAAGAAGTGGTGGACGAAGTAATAGAGATATCA
 
. : . : . : . : . : . :
rJMSF015J11+ NGTGANGTANCTGTNGAAACTGCGAANCANTTANCAGTTAAAGAAGGATTGCTGGTGGGC
rJMSF010M20+ AGTGATGTAGCTGTTGAAACTGCGAAGCAATTAGCAGTTAAAGAAGGATTGCTGGTGGGC
rJMFF023E01+ AGTGATGTAGCTGTTGAAACTGCGAAGCAATTAGCAGTTAAAGAAGGATTGCTGGTGGGC
rJMSF047I12+ AGTGATGTAGCTGTTGAAACTGCGAAGCAATTAGCAGTTAAAGAAGGATTGCTGGTGGGC
                      ____________________________________________________________
consensus AGTGATGTAGCTGTTGAAACTGCGAAGCAATTAGCAGTTAAAGAAGGATTGCTGGTGGGC
 
. : . : . : . : . : . :
rJMSF015J11+ ATTTCCTCGGGAGCAGCTGCAGCTGCTGCAATAGAGGTNGCAAAGCGACCTGAGNATGCG
rJMSF010M20+ ATTTCCTCGGGAGCAGCTGCAGCTGCTGCAATAGAGGTTGCAAAGCGACCTGAGAATGCG
rJMFF023E01+ ATTTCCTCGGGGGCAGCTGCAGCTGCTGCAATAGAGGTTGCAAAGCGACCTGAGAATGCG
rJMSF047I12+ ATTTCCTCGGGAGCAGCTGCAGCTGCTGCAATAGAGGTTGCAAAGCGACCTGAGAATGCG
                      ____________________________________________________________
consensus ATTTCCTCGGGAGCAGCTGCAGCTGCTGCAATAGAGGTTGCAAAGCGACCTGAGAATGCG
 
. : . : . : . : . : . :
rJMSF015J11+ GGAAAGCTTATTGCGGTTGTTTTCCCGAGCTTTGGGGAGCGGTCTCTATCGATGTATACT
rJMSF010M20+ GGAAAGCTTATTGCGGTTGTTTTCCCGAGCTTTGGGGAGCGGTATCTATCGA-GTATACT
rJMFF023E01+ GGAAAGCTTATTGCGGTTGTTTTCCCGAGCTTTGGGGAGCGGTATCTATCGA-GTATACT
JMSF042C03- GGTATCTATCGA-GTATACT
rJMSF047I12+ GGAAAGCTTATTGCGGTTGTTTTCCCGAGCTTTGGGGAGCGGTATCTATCGA-GTATACT
                      ____________________________________________________________
consensus GGAAAGCTTATTGCGGTTGTTTTCCCGAGCTTTGGGGAGCGGTATCTATCGA-GTATACT
 
. : . : . : . : . : . :
rJMSF015J11+ TTTCCAATCGATTCGGGATGANTGCGAAAAAATGCAACCGGAGTGAGCATATNGATTNNG
rJMSF010M20+ TTTCCAATCGATTCGGGATGAATGCGAAAAAATGCAACCGGAGTGAGCATATTGATTTTG
rJMFF023E01+ TTTCCAATCGATTCGGGATGAATGCGAAAAAATGCAACCGGAGTGAGCATATTGATTTTG
JMSF042C03- TTTCCAATCGATTCGGGATGAATGCGAAAAAATGCAACCGGAGTGAGCATATTGATTTTG
rJMSF047I12+ TTTCCAATCGATTCGGGATGAATGCGAAAAAATGCAACCGGAGTGAGCATATTGATTTTG
                      ____________________________________________________________
consensus TTTCCAATCGATTCGGGATGAATGCGAAAAAATGCAACCGGAGTGAGCATATTGATTTTG
 
. : . : . : . : . : . :
rJMSF015J11+ AAGNGATNTCCTGAACGCAA
rJMSF010M20+ AAGTGATTTCCTGAACGCAAATAAAAACAAATTTTGATGAATTTTTGTTATAGTTTGGTG
rJMFF023E01+ AAGTGATTTCCTGAACGCAAATAAAAACAAATTTTGATGAATTTTTGTTATAGTTTGGTG
JMSF042C03- AAGTGATTTCCTGAACGCAAATAAAAACAAATTTTGATGAATTTTTGTTATAGTTTGGTG
rJMSF047I12+ AAGTGATTTCCTGAACGCAAATAAAAACAAATTTTGATGAATTTTTGTTATAGTTTGGTG
                      ____________________________________________________________
consensus AAGTGATTTCCTGAACGCAAATAAAAACAAATTTTGATGAATTTTTGTTATAGTTTGGTG
 
. : . : . : . : . : . :
rJMSF010M20+ GGTTGTTGCATAATCAACTTGTAATTCAGAACTAAATGATCTCTGGTGTAATTTTTCTTT
rJMFF023E01+ GATTGTTGCATAATCAACTTGTAATTCAGAACTAAATGATCTCTGGTGTAATTTTTC-TT
JMSF042C03- GATTGTTGCATAATCAACTTGTAATTCAGAACTAAATGATCTCTGGTGTAATTTTTCTTT
rJMSF047I12+ GATTGTTGCATAATCAACTTGTAATTCAGAACTAAATGATCTCTGGTGTAATTTTTCTTT
                      ____________________________________________________________
consensus GATTGTTGCATAATCAACTTGTAATTCAGAACTAAATGATCTCTGGTGTAATTTTTCTTT
 
. : . : . : . : . : . :
rJMSF010M20+ GTGCTACATT
rJMFF023E01+ GTGCTACATTTGTTGGCAAAGTTGATTATACT
JMSF042C03- GTGCTACATTTGTTGGCAAAGTTGATTATACTCTAAC
rJMSF047I12+ GTGCTACATTTGTTGGCAAAGTTGATTATACTCTAACTAAAGTGGACTTAATACCCGATT
                      ____________________________________________________________
consensus GTGCTACATTTGTTGGCAAAGTTGATTATACTCTAACTAAAGTGGACTTAATACCCGATT