Contig 005819:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF046P01Sequence722005819 (3)ref|XP_009781550.1|280PREDICTED: uncharacterized protein LOC104230432 [Nicotiana sylvestris]663005819 (3)ref|XP_009596178.1|196PREDICTED: uncharacterized protein LOC104092313 [Nicotiana tomentosiformis]
JMSF051M02Sequence639002167 (43)gb|KDO42919.1|1e-77hypothetical protein CISIN_1g0225291mg, partial [Citrus sinensis]621005819 (3)ref|XP_009596178.1|196PREDICTED: uncharacterized protein LOC104092313 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046P01- GCACTATCTTCTATCTACCCCAGCA
                      ____________________________________________________________
consensus GCACTATCTTCTATCTACCCCAGCA
 
. : . : . : . : . : . :
JMSF046P01- AATTATTTTATTCACCGGAAAAAATGGTGCTGTCCGACGGCCGGCAGGTGTACCAGAACG
                      ____________________________________________________________
consensus AATTATTTTATTCACCGGAAAAAATGGTGCTGTCCGACGGCCGGCAGGTGTACCAGAACG
 
. : . : . : . : . : . :
JMSF046P01- TGGTTGTAATGAGGCACGGCCCCCGCCTCGATAACTTCGACAAGCTCTGGGCTGCCACGG
                      ____________________________________________________________
consensus TGGTTGTAATGAGGCACGGCCCCCGCCTCGATAACTTCGACAAGCTCTGGGCTGCCACGG
 
. : . : . : . : . : . :
JMSF046P01- CGGACCGGCCCTGGGACCCGCCGCTTTACAGCCCAGGCAAGAGCCTGGCTTTCGACGCCG
                      ____________________________________________________________
consensus CGGACCGGCCCTGGGACCCGCCGCTTTACAGCCCAGGCAAGAGCCTGGCTTTCGACGCCG
 
. : . : . : . : . : . :
JMSF046P01- GGAAGAAGATCCGGGAAGAGCTCGGAGCTCCGATCCACAGGATCTTCGTCTCCCCTTTCC
rJMSF051M02+ TTCC
rJMSF046P01+ TTCC
                      ____________________________________________________________
consensus GGAAGAAGATCCGGGAAGAGCTCGGAGCTCCGATCCACAGGATCTTCGTCTCCCCTTTCC
 
. : . : . : . : . : . :
JMSF046P01- TCCGGTGCCTTCAGACTGCGTCTGAGACTATCAGAGCCCTCTCCGATGACTCCGATACCG
rJMSF051M02+ TCCGGTGCCTTCAGACTGCGTCTGAGACTATCAGAGCCCTCTCCGATGACTCCGATACCG
rJMSF046P01+ TCCGGTGCCTTCAGACTGCGTCTGAGACTATCAGAGCCCTCTCCGATGACTCCGATACCG
                      ____________________________________________________________
consensus TCCGGTGCCTTCAGACTGCGTCTGAGACTATCAGAGCCCTCTCCGATGACTCCGATACCG
 
. : . : . : . : . : . :
JMSF046P01- CCGTCAATCCTCCCAAAATCAAGGTTTCTGTTGAGTTTGGATTGTCAGAGATGTTGAACA
rJMSF051M02+ CCGTCAATCCTCCCAAAATCAAGGTTTCTGTTGAGTTTGGATTGTCAGAGATGTTGAACA
rJMSF046P01+ CCGTCAATCCTCCCAAAATCAAGGTTTCTGTTGAGTTTGGATTGTCAGAGATGTTGAACA
                      ____________________________________________________________
consensus CCGTCAATCCTCCCAAAATCAAGGTTTCTGTTGAGTTTGGATTGTCAGAGATGTTGAACA
 
. : . : . : . : . : . :
JMSF046P01- CAATTGCCATAAGACCTAAAGTGGCTCCCAAAGATGGAGACTTCAAATTTGTCATTTCAC
rJMSF051M02+ CAATTGCCATAAGACCTAAAGTGGCTCCCAAAGATGGAGACTTCAAATTTGTCATTTCAC
rJMSF046P01+ CAATTGCCATAAGACCTAAAGTGGCTCCCAAAGATGGAGACTTCAAATTTGTCATTTCAC
                      ____________________________________________________________
consensus CAATTGCCATAAGACCTAAAGTGGCTCCCAAAGATGGAGACTTCAAATTTGTCATTTCAC
 
. : . : . : . : . : . :
JMSF046P01- AGTGTGAAACTCACTTACCACCTGGAACCATTGACCACACTGCAGAACAAGTCTACAAAA
rJMSF051M02+ AGTGTGAAACTCACTTACCACCTGGAACCATTGACCACACTGCAGAACAAGTCTACAAAA
rJMSF046P01+ AGTGTGAAACTCACTTACCACCTGGAACCATTGACCACACTGCAGAACAAGTCTACAAAA
                      ____________________________________________________________
consensus AGTGTGAAACTCACTTACCACCTGGAACCATTGACCACACTGCAGAACAAGTCTACAAAA
 
. : . : . : . : . : . :
JMSF046P01- AGCTGCCGGAGTGGCAAGAAACACAACCAGACGCAAGGGCTAGGTACATTGAAGTCCTTA
rJMSF051M02+ AGCTGCCGGAGTGGCAAGAAACACAACCAGACGCAAGGGCTAGGTACATTGAAGTCCTTA
rJMSF046P01+ AGCTGCCGGAGTGGCAAGAAACACAACCAGACGCAAGGGCTAGGTACATTGAAGTCCTTA
                      ____________________________________________________________
consensus AGCTGCCGGAGTGGCAAGAAACACAACCAGACGCAAGGGCTAGGTACATTGAAGTCCTTA
 
. : . : . : . : . : . :
JMSF046P01- GAGCTCTTGCTGATAAATACCCTTCTGAGAATTTGCTGCTCATCACACACGGTGAGGGAG
rJMSF051M02+ GAGCTCTTGCTGATAAATACCCTTCTGAGAATTTGCTGCTCATCACACACGGTGAGGGAG
rJMSF046P01+ GAGCTCTTGCTGATAAATACCCTTCTGAGAATTTGCTGCTCATCACACACGGTGAGGGAG
                      ____________________________________________________________
consensus GAGCTCTTGCTGATAAATACCCTTCTGAGAATTTGCTGCTCATCACACACGGTGAGGGAG
 
. : . : . : . : . : . :
JMSF046P01- TGCTGTCTGTGGGTTCTGCATTCATGGAGGGTGATATTAAATGGGTTGAATACTGTGGAT
rJMSF051M02+ TGCTGTCTGTGGGTTCTGCATTCATGGAGGGTGATATTAAATGGGTTGAATACTGTGGAT
rJMSF046P01+ TGCTGTCTGTGGGTTCTGCATTCATGGAGGGTGATATTAAATGGGTTGAATACTGTGGAT
                      ____________________________________________________________
consensus TGCTGTCTGTGGGTTCTGCATTCATGGAGGGTGATATTAAATGGGTTGAATACTGTGGAT
 
. : . : . : . : . : . :
JMSF046P01- ATTCACACTTGAAAGAGAGCTATCCCGGCGGCCGGCG
rJMSF051M02+ ATTCACACTTG-AAGAGAGCTATCCCGGCGGCCGGCGAGAGCTGCGAGTCCTTTGCCGAT
rJMSF046P01+ ATTCACACTTG-AAGAGAGCTATCCCGGCGGCCGGCGAGAGCTGCGAGTCCTTTGCCGAT
                      ____________________________________________________________
consensus ATTCACACTTG-AAGAGAGCTATCCCGGCGGCCGGCGAGAGCTGCGAGTCCTTTGCCGAT
 
. : . : . : . : . : . :
rJMSF051M02+ GAAGAGTTCAGGCTGCAGAGTGAATCTGGGTTTACATTCCATGACTCGTCTGCTAAGCCC
rJMSF046P01+ GAAGAGTTCAGGCTGCAGAGTGAATCTGGGTTTACATTCCATGACTCGTCTGCTAAGCCC
                      ____________________________________________________________
consensus GAAGAGTTCAGGCTGCAGAGTGAATCTGGGTTTACATTCCATGACTCGTCTGCTAAGCCC
 
. : . : . : . : . : . :
rJMSF051M02+ GTCGTAGTATAATTAAGTGTATAAGTAATCATTATTGTTGAAGCAGCTTTATGTTTTGCG
rJMSF046P01+ GTCGTAGTATAATTAAGTGTATAAGTAATCATTATTGTTGAAGCAGCTTTATGTTTTGCG
                      ____________________________________________________________
consensus GTCGTAGTATAATTAAGTGTATAAGTAATCATTATTGTTGAAGCAGCTTTATGTTTTGCG
 
. : . : . : . : . : . :
rJMSF051M02+ TTCTTGAAGTCCCATTAT
rJMSF046P01+ TTCTTGAAGTCCCATTATTGATCTGTAATCAGTTGTCCGGCCGGCGGCCGTATCGTATGT
                      ____________________________________________________________
consensus TTCTTGAAGTCCCATTATTGATCTGTAATCAGTTGTCCGGCCGGCGGCCGTATCGTATGT