Contig 005814:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF046D01+                                 TTCCNGGCTACTTAGGTGAATATTTGGCTTTAACGGG
                      ____________________________________________________________
consensus                                    TTCCNGGCTACTTAGGTGAATATTTGGCTTTAACGGG
 
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rJMSF031B15+                                                           TATGTATTAAA
rJMSF046D01+          AGAAAAGCTTAACGGTGTAGAAATGATTGCCTGCGGTCTTGCAACACACTATGTATTAAA
                      ____________________________________________________________
consensus             AGAAAAGCTTAACGGTGTAGAAATGATTGCCTGCGGTCTTGCAACACACTATGTATTAAA
 
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rJMSF031B15+          AGAAAGGCTTCCCTGGATTGAAGAACGGCTTGGTAAATTGATGACAGACGATCGTTCTGT
rJMSF046D01+          AGAAAGGCTTCCCTGGATTGAAGAACGGCTTGGTAAATTGATGACAGACGATCGTTCTGT
                      ____________________________________________________________
consensus             AGAAAGGCTTCCCTGGATTGAAGAACGGCTTGGTAAATTGATGACAGACGATCGTTCTGT
 
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rJMSF031B15+          TATTGAAAATTCTCTTGCTCAATATGGGGACCTTGTTTATCCAGATAGGAGAAGCGTGCT
rJMSF046D01+          TATTGAAAATTCTCTTGCTCAATATGGGGACCTTGTTTATCCAGATAGGAGAAGCGTGCT
                      ____________________________________________________________
consensus             TATTGAAAATTCTCTTGCTCAATATGGGGACCTTGTTTATCCAGATAGGAGAAGCGTGCT
 
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rJMSF031B15+          TCACAAGTTTGAAATGATTGATAAATGCTTTAGTCCAGACACGGTTGAGGAAATTATTGA
rJMSF046D01+          TCACAAGTTTGAAATGATTGATAAATGCTTTAGTCCAGACACGGTTGAGGAAATTATTGA
                      ____________________________________________________________
consensus             TCACAAGTTTGAAATGATTGATAAATGCTTTAGTCCAGACACGGTTGAGGAAATTATTGA
 
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rJMSF031B15+          AGCTCTGGAAAACGAGACAACTGAGTCATACGATGAATGGTGTGCTACAACTCTTAAAAA
rJMSF046D01+          AGCTCTGGAAAACGAGACAACTGAGTCATACGATGAATGGTGTGCTACAACTCTTAAAAA
                      ____________________________________________________________
consensus             AGCTCTGGAAAACGAGACAACTGAGTCATACGATGAATGGTGTGCTACAACTCTTAAAAA
 
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rJMSF031B15+          GATAAAAGCAGCATCTCCGTTAAGCTTGAAAGTCACTTTGAATTCAATTAGAGAAGGGAG
rJMSF046D01+          GATAAAAGCAGCATCTCCGTTAAGCTTGAAAGTCACTTTGAATTCAATTAGAGAAGGGAG
                      ____________________________________________________________
consensus             GATAAAAGCAGCATCTCCGTTAAGCTTGAAAGTCACTTTGAATTCAATTAGAGAAGGGAG
 
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rJMSF031B15+          ATTTCAATCACTTGATCAGTGCCTGGCACGTGAATATCGCGTATCCCTGAACTGGATTTC
rJMSF046D01+          ATTTCAATCACTTGATCAGTGCCTGGCACGTGAATATCGCGTATCCCTGAACTGGATTTC
                      ____________________________________________________________
consensus             ATTTCAATCACTTGATCAGTGCCTGGCACGTGAATATCGCGTATCCCTGAACTGGATTTC
 
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rJMSF031B15+          GAAACAGGTGTCTGGTGATTTCTGTGAGGGGGTTCGTGCTAGATTGATCGACAAGGATTT
rJMSF046D01+          GAAACAGGTGTCTGGTGATTTCTGTGAGGGGGTTCGTGCTAGATTGATCGACAAGGATTT
                      ____________________________________________________________
consensus             GAAACAGGTGTCTGGTGATTTCTGTGAGGGGGTTCGTGCTAGATTGATCGACAAGGATTT
 
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rJMSF031B15+          CAGTCCAAAGTGGGATCCACCACGATTGGAGGACGTTACGAAGGACATGGTTGAATCCTT
rJMSF046D01+          CAGTCCAAAGTGGGATCCACCACGATTGGAGGACGTTACGAAGGACATGGTTGAATCCTT
                      ____________________________________________________________
consensus             CAGTCCAAAGTGGGATCCACCACGATTGGAGGACGTTACGAAGGACATGGTTGAATCCTT
 
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rJMSF031B15+          CTTTGCCCCTCTGGGTGAGTTTGATTCGGAACTAAACTTGCCAACATCAATACGAGAGCC
rJMSF046D01+          CTTTGCCCCTCTGGGTGAGTTTGATTCGGAACTAAACTTGCCAACATCAATACGAGAGCC
                      ____________________________________________________________
consensus             CTTTGCCCCTCTGGGTGAGTTTGATTCGGAACTAAACTTGCCAACATCAATACGAGAGCC
 
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rJMSF031B15+          TTCAGTTTGATCTCTGTTTCCGACTACAATTTCTGTAAAATTTTCAAACTACAGTTTTAG
rJMSF046D01+          TTCAGTTTGATCTCTGTTTCCGACTACAATTTCTGTAAAATTTTCAAACTACAGTTTTAG
                      ____________________________________________________________
consensus             TTCAGTTTGATCTCTGTTTCCGACTACAATTTCTGTAAAATTTTCAAACTACAGTTTTAG
 
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rJMSF031B15+          ATTTGATAGGAAGGCAAGAAACAATAGCTTTTTGACCCACCCAACAGGCCAACACCATTA
rJMSF046D01+          ATTTGATAGGAAGGCAAGAAACAATAGCTTTTTGACCCACCCAACAGGCCAACACCATTA
                      ____________________________________________________________
consensus             ATTTGATAGGAAGGCAAGAAACAATAGCTTTTTGACCCACCCAACAGGCCAACACCATTA
 
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rJMSF031B15+          AAGATTGAGTTTTATTGGTCATAAATTGGAGAGGAAAGATACACT               
rJMSF046D01+          AAGATTGAGTTTTATTGGTCATAAATTGGAGAGGAAAGATACACTTTTAGTTATTTATAA
                      ____________________________________________________________
consensus             AAGATTGAGTTTTATTGGTCATAAATTGGAGAGGAAAGATACACTTTTAGTTATTTATAA