Contig 005812:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012M02Sequence520003450 (8)ref|XP_011102070.1|2e-67PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein 801005812 (8)emb|CAN65055.1|2e-113hypothetical protein VITISV_012378 [Vitis vinifera]
JMFF019N05Sequence588003450 (8)ref|XP_011102070.1|6e-76PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein 766005812 (8)emb|CAN65055.1|4e-106hypothetical protein VITISV_012378 [Vitis vinifera]
JMSF021N17Sequence690024171emb|CDO96888.1|3e-54unnamed protein product [Coffea canephora]721005812 (8)ref|XP_006358131.1|2e-102PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650
JMSF023E11Sequence671000598 (9)ref|XP_011102070.1|9e-89PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein 745005812 (8)ref|XP_007025271.1|3e-105Leucine-rich repeat transmembrane protein kinase [Theobroma cacao] gb|EOY27893.1
JMSF027K20Sequence661003450 (8)ref|XP_011102070.1|2e-82PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein 748005812 (8)ref|XP_007025271.1|1e-131Leucine-rich repeat transmembrane protein kinase [Theobroma cacao] gb|EOY27893.1
JMSF036I06Sequence660005812 (8)ref|XP_009795509.1|9e-70PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650768005812 (8)gb|KJB57368.1|2e-101hypothetical protein B456_009G159600 [Gossypium raimondii]
JMSF045G23Sequence746012591 (2)ref|XP_011102303.1|1e-96PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650751005812 (8)ref|XP_007025266.1|5e-76Leucine-rich repeat transmembrane protein kinase, putative [Theobroma cacao] gb

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF036I06- GGCAATGTTTCGATTGGTGACACTACATATGACGCAGATAA
                      ____________________________________________________________
consensus GGCAATGTTTCGATTGGTGACACTACATATGACGCAGATAA
 
. : . : . : . : . : . :
JMSF036I06- AGATTCTGTTGGACCTGCCAAATTTGTTTCCAATACAGAGAACTAGGTAGCCCCTAATAC
                      ____________________________________________________________
consensus AGATTCTGTTGGACCTGCCAAATTTGTTTCCAATACAGAGAACTAGGTAGCCCCTAATAC
 
. : . : . : . : . : . :
JMSF036I06- AGGGTACTTTTGGGACTCAATGTCAGATAACTATACACGGTATACGGCAACAAATATATC
                      ____________________________________________________________
consensus AGGGTACTTTTGGGACTCAATGTCAGATAACTATACACGGTATACGGCAACAAATATATC
 
. : . : . : . : . : . :
JMSF036I06- TGTCGTCAATGCAGAAGACTCTGAAATTTACAAGACTGCTCGTTTGTCTCCTTTATCTCT
                      ____________________________________________________________
consensus TGTCGTCAATGCAGAAGACTCTGAAATTTACAAGACTGCTCGTTTGTCTCCTTTATCTCT
 
. : . : . : . : . : . :
JMSF036I06- AACGTATAACGGGCGTTGTTTGGCAAATGGAAACTATACTGTGAAACTTCATTTTGCAGA
rJMSF036I06+ GCAGA
                      ____________________________________________________________
consensus AACGTATAACGGGCGTTGTTTGGCAAATGGAAACTATACTGTGAAACTTCATTTTGCAGA
 
. : . : . : . : . : . :
JMSF036I06- GATAGTTATTAGAGATAATAGATCTTTTCAAAGTTTTGGAAGACGCATATTTGATGTTTA
rJMSF036I06+ GATAGTTATTAGAGATAATAGATCTTTTCAAAGTTTTGGAAGACGCATATTTGATGTTTA
                      ____________________________________________________________
consensus GATAGTTATTAGAGATAATAGATCTTTTCAAAGTTTTGGAAGACGCATATTTGATGTTTA
 
. : . : . : . : . : . :
JMSF036I06- CATACAGGGTGAAATGAAATTAAAGGATTTTGAAATTAAAACTGAAGCACAAGGAGTTGA
rJMSF036I06+ CATACAGGGTGAAATGAAATTAAAGGATTTTGAAATTAAAACTGAAGCACAAGGAGTTGA
                      ____________________________________________________________
consensus CATACAGGGTGAAATGAAATTAAAGGATTTTGAAATTAAAACTGAAGCACAAGGAGTTGA
 
. : . : . : . : . : . :
JMSF036I06- TAAAGCCTTAGTTAAAGAATTTCAAATAATTGTTAGAGATAAAACTCTAGAGGTGCGATT
rJMSF036I06+ TAAAGCCTTAGTTAAAGAATTTCAAATAATTGTTAGAGATAAAACTCTAGAGGTGCGATT
                      ____________________________________________________________
consensus TAAAGCCTTAGTTAAAGAATTTCAAATAATTGTTAGAGATAAAACTCTAGAGGTGCGATT
 
. : . : . : . : . : . :
JMSF036I06- TGTGTATGCTG
rJMSF036I06+ TGTGTATGCTGGGAAAGGAAGATATGGACCTTTAATATCTGCCATTTCTGTGAAATTTGC
                      ____________________________________________________________
consensus TGTGTATGCTGGGAAAGGAAGATATGGACCTTTAATATCTGCCATTTCTGTGAAATTTGC
 
. : . : . : . : . : . :
rJMSF036I06+ CAATTCTGTAGATTTTAAGCCTCCCGAACAGCAAAAGACTTTCGTCAAGCCTCCCAAAAA
                      ____________________________________________________________
consensus CAATTCTGTAGATTTTAAGCCTCCCGAACAGCAAAAGACTTTCGTCAAGCCTCCCAAAAA
 
. : . : . : . : . : . :
rJMSF036I06+ GCGAAAGACTTTAATCATAGTTGGTGCAGTAACTTTTTCTTTGTTTCTTACTATCACAAT
                      ____________________________________________________________
consensus GCGAAAGACTTTAATCATAGTTGGTGCAGTAACTTTTTCTTTGTTTCTTACTATCACAAT
 
. : . : . : . : . : . :
rJMSF036I06+ TCTCTGTTTTGTCTGGTGGAAGATCTACATAAGAAACAAGACCTCACCAGGAAGAGGAGA
                      ____________________________________________________________
consensus TCTCTGTTTTGTCTGGTGGAAGATCTACATAAGAAACAAGACCTCACCAGGAAGAGGAGA
 
. : . : . : . : . : . :
rJMSF036I06+ ACGAGATGTTGATCTAGGAACAGGACTGTTTTCCTTCACACAAATTAAAACCGCTACAAA
                      ____________________________________________________________
consensus ACGAGATGTTGATCTAGGAACAGGACTGTTTTCCTTCACACAAATTAAAACCGCTACAAA
 
. : . : . : . : . : . :
rJMSF036I06+ CAACTTTGATGCTGCAAATAAGATTGGAGAAGGTGGCTTTGGACCTGTCTACAAGGGTAT
                      ____________________________________________________________
consensus CAACTTTGATGCTGCAAATAAGATTGGAGAAGGTGGCTTTGGACCTGTCTACAAGGGTAT
 
. : . : . : . : . : . :
rJMSF036I06+ ATTATTGGATGGTACGATTATTGCTGTAAAACAACTCTCATCCAAATCAAGTCAAGGAAA
rJMSF021N17+ AAATCACGACAAGGATA
                      ____________________________________________________________
consensus ATTATTGGATGGTACGATTATTGCTGTAAAACAACTCTCATCCAAATCACGTCAAGGATA
 
. : . : . : . : . : . :
rJMSF036I06+ TCGCGAATTTTTAAATGAAATAGGCATGATTTCTTGTTTGCAGCATCCTAATCTTGTGAA
rJMSF021N17+ CCGTGAATTTTTGAATGAAATAGGCATGATTTCTTGTCTGCAGCACCCTAATCTTGTGAA
rJMSF027K20+ TTTTGAATGAAATAGGCATGATTTCATGTTTGCAGCACCCCAACCTTGTGAA
                      ____________________________________________________________
consensus TCGTGAATTTTTGAATGAAATAGGCATGATTTCTTGTTTGCAGCACCCTAATCTTGTGAA
 
. : . : . : . : . : . :
rJMSF036I06+ ACTTTATGGGTGTTGTGTTGAGGGAAAGCAATTGCTGCTGGTGTACGAGTACTTGGAAAA
rJMSF021N17+ ACTCTATGGGTGTTGTGTTGAGAGAAAGCCATTGTTGCTGGTGTATGAGTACATGGAAAA
rJMFF012M02+ TGGAAAC
rJMSF027K20+ ACTTTATGGGTGTTGTGTAGAAAGAAAGCCGTTGCTGCTGGTATATGAATACATGGAAAA
                      ____________________________________________________________
consensus ACTTTATGGGTGTTGTGTTGAGAGAAAGCCATTGCTGCTGGTGTATGAGTACATGGAAAA
 
. : . : . : . : . : . :
rJMSF036I06+ CAATAGCCTTGCTCATGCTCTTTT
rJMSF021N17+ CAACAGCCTTGCCCATGCTCTTTTTGGTCCAGAAGAGTGTC------ACATAAACTGGCC
rJMFF019N05+ TTTTGGTTCAGAAGATCGACAACTGAAAATAGATTGGGC
rJMFF012M02+ CAATAGCCTTGCCAATGCTCTTTTTGGTTCAGAAGATCGACAACTGAAAATAGATTGGGC
rJMSF023E11+ GAAGATTGTCAACTGAATATAGACTGGCC
rJMSF027K20+ CAATAGCCTTGCCAATGCTCTTTTTGGTTCAGAAGATCGACAACTGAAAATAGATTGGGC
rJMSF045G23+ GAAAATAGATTGGGC
                      ____________________________________________________________
consensus CAATAGCCTTGCCCATGCTCTTTTTGGTTCAGAAGATCGACAACTGAAAATAGATTGGGC
 
. : . : . : . : . : . :
rJMSF021N17+ TACAAGACAAAGTA-TTTGTGTTGGTATTGCAAAAGGTTTAGCCTTTCTGCATGAAGAAT
rJMFF019N05+ TACTAGACAAAGAA-TTTGTGTCGGTATTGCAAAAGGTTTAGCTTTCCTGCATGAAGAAT
rJMFF012M02+ TACTAGACAAAGAA-TTTGTGTCGGTATTGCAAAAGGTTTAGCTTTCCTGCATGAAGAAT
rJMSF023E11+ TACCAGACAAAAAA-TATGTCTCGGTATTGCAAAAGGTTTAGCTTTCTTGCACGAAGAAT
rJMSF027K20+ TACTAGACAAAGAA-TTTGTGTCGGTATTGCAAAAGGTTTAGCTTTCCTGCATGAAGAAT
rJMSF045G23+ TACTAGACAAAGAATTTTGTGTCGGTATTGCAAAAGGTTTAGCTTTCCTGCATGAAGAAT
                      ____________________________________________________________
consensus TACTAGACAAAGAA-TTTGTGTCGGTATTGCAAAAGGTTTAGCTTTCCTGCATGAAGAAT
 
. : . : . : . : . : . :
rJMSF021N17+ CAGCAATAAAAGTTGTTCATAGAGACATCAAGACCGCCAATGTTCTTCTTGACAAAGAAC
rJMFF019N05+ CAACAATAAAAGTTGTTCATAGAGACATTAAAACCGCCAATGTGCTTCTTGACAAGGAAC
rJMFF012M02+ CAACAATAAAAGTTGTTCATAGAGACATTAAAACCGCCAATGTGCTTCTTGACAAGGAAC
rJMSF023E11+ CAGCAATAAAAATTGTTCATAGAGACATTAAAGCCTCCAACGTGCTTCTTGACAAAGAGC
rJMSF027K20+ CAACAATAAAAGTTGTTCATAGAGACATTAAAACCGCCAATGTGCTTCTTGACAAGGAAC
rJMSF045G23+ CAACAATAAAAGTTGTTCATAGAGACATTAAAACCGCCAATGTGCTTCTTGACAAGGAAC
                      ____________________________________________________________
consensus CAACAATAAAAGTTGTTCATAGAGACATTAAAACCGCCAATGTGCTTCTTGACAAGGAAC
 
. : . : . : . : . : . :
rJMSF021N17+ TCAATCCAAAAATTTCTGACTTTGGTTTAGCTAAACTCTATGATGATGACAAGTCACACA
rJMFF019N05+ TCAATCCAAAAATTTCTGACTTTGGTTTAGCTAAACTTGACGATGATGAGAAGTCACACA
rJMFF012M02+ TCAATCCAAAAATTTCTGACTTTGGTTTAGCTAAACTTGACGATGATGAGAAGTCACACA
rJMSF023E11+ TCAATCCAAAAATTTCTGATTTTGGTCTAGCTAAGCTTGACGATGATGAGAATACACACA
rJMSF027K20+ TCAATCCAAAAATTTCTGACTTTGGTTTAGCTAAACTTGACGATGATGAGAAGTCACACA
rJMSF045G23+ TCAATCCAAAAATTTCTGACTTTGGTTTAGCTAAACTTGACGATGATGAGAAGTCACACA
                      ____________________________________________________________
consensus TCAATCCAAAAATTTCTGACTTTGGTTTAGCTAAACTTGACGATGATGAGAAGTCACACA
 
. : . : . : . : . : . :
rJMSF021N17+ TCAGCACAAGAGTTGCTGGGACAATGGGATACACTGCTCCTGAATATGCATTGTGGGGCT
rJMFF019N05+ TCAGTACAAGAGTTGCTGGGACAATAGGATACACGGCTCCTGAATATGCATTGTGGGGCT
rJMFF012M02+ TCAGTACAAGAGTTGCTGGGACAATAGGATACACGGCTCCTGAATATGCATTGTGGGGCT
rJMSF023E11+ TCAGCACAAGAGTTGCTGGGACAGTAGGATACATGGCTCCTGAATATACACTCTGGGGCT
rJMSF027K20+ TCAGTACAAGAGTTGCTGGGACAATAGGATACACGGCTCCTGAATATGCATTGTGGGGCT
rJMSF045G23+ TCAGTACAAGAGTTGCTGGGACAATAGGATACACGGCTCCTGAATATGCATTGTGGGGCT
                      ____________________________________________________________
consensus TCAGTACAAGAGTTGCTGGGACAATAGGATACACGGCTCCTGAATATGCATTGTGGGGCT
 
. : . : . : . : . : . :
rJMSF021N17+ ACTTAACATTCAAAGCTGATGTCTATAGTTTTGGAGTGGTGGCATTGGAAATTGTTGCCG
rJMFF019N05+ ACTTAACATTCAAAGCTGATGTCTATAGTTTCGGGGTGGTGGCACTAGAAATTGTTTCTG
rJMFF012M02+ ACTTAACATTCAAAGCTGATGTCTATAGTTTCGGGGTGGTGGCACTAGAAATTGTTTCTG
rJMSF023E11+ ACTTAACATACAAAGTCGATGTGTATAGTTTCGGAGTGGTGGCACTAGAAATTGTTGCCG
rJMSF027K20+ ACTTAACATTCAAAGCTGATGTCTATAGTTTCGGGGTGGTGGCACTAGAAATTGTTTCTG
rJMSF045G23+ ACTTAACATTCAAAGCTGATGTCTATAGTTTCGGGGT--TGGCACTAGAAATTGTTTCTG
                      ____________________________________________________________
consensus ACTTAACATTCAAAGCTGATGTCTATAGTTTCGGGGTGGTGGCACTAGAAATTGTTTCTG
 
. : . : . : . : . : . :
rJMSF021N17+ GGATGAACAACATGAAGTATCGTCATGATGAGGAGTGTGTTTGCCTTCTTGATTGGG
rJMFF019N05+ GGAAGAACAACATGAAATTTCGCCCCGATGAGAACTACGTTTGCCTCCTTGATTGGGCAC
rJMFF012M02+ GGAAGAACAACATGAAATTTCGCCCCGATGAGAACTACGTTTGCCTCCTNGATTGGGCAC
rJMSF023E11+ GGAAAAACAACATGAAGCATCGTCATGATGAGGACTATGTTTGCCTCCTTGATTGGGCAC
rJMSF027K20+ GGAAGAACAACATGAAATTTCGCCCCGATGAGAACTACGTTTGCCTCCTTGATTGGGCAC
rJMSF045G23+ GGAAGAACAACATGAAATTTCGCCCCGATGAGAACTACGTTTGCCTCCTTGATTGGGCAC
                      ____________________________________________________________
consensus GGAAGAACAACATGAAATTTCGCCCCGATGAGAACTACGTTTGCCTCCTTGATTGGGCAC
 
. : . : . : . : . : . :
rJMFF019N05+ TTGTTCTTCAAGAAAAAGGAAACTTAATGGAGCTAATAGATCCAAGATTGGGTTCTGATT
rJMFF012M02+ TTGTTCTTCAAGAAAAAGGAAACTTAATGGAGCTAATAGATCCAAGATTGGGTTCTGATT
rJMSF023E11+ TTGTTCTTCAAGAAAATGGTAACCTATTGGAACTAATAGATCCAAGATTGGGTTCTGATT
rJMSF027K20+ TTGTTCTTCAAGAAAAAGGAAACTTAATGGAGCTAATAGATCCAAGATTGGGTTCTGATT
rJMSF045G23+ TTGTTCTTCAAGAAAAAGGAAACTTAATGGAGCTAATAGATCCAAGATTGGGTTCTGATT
                      ____________________________________________________________
consensus TTGTTCTTCAAGAAAAAGGAAACTTAATGGAGCTAATAGATCCAAGATTGGGTTCTGATT
 
. : . : . : . : . : . :
rJMFF019N05+ TTGACAAAGAACAAGCACTCAAAATGCTCGAAGTAGCTTTGCTATGTACTAATCCTTCAC
rJMFF012M02+ TTGACAAAGAACAAGCACTCAAAATGCTCGAAGTAGCTTTGCTATGTACTAATCCTTCAC
rJMSF023E11+ TTGATAAAGAACAAGCTATCAGAATGATCAAAGTAGCTTTGTTTTG
rJMSF027K20+ TTGACAAAGAACAAGCACTCAAAATGCTCGAAGTAGCTTTGCTATGTACTAATCCTTCAC
rJMSF045G23+ TTGACAAAGAACAAGCACTCAAAATGCTCGAAGTAGCTTTGCTATGTACTAATCCTTCAC
                      ____________________________________________________________
consensus TTGACAAAGAACAAGCACTCAAAATGCTCGAAGTAGCTTTGCTATGTACTAATCCTTCAC
 
. : . : . : . : . : . :
rJMFF019N05+ CAGTCCTTAGGCCATCTATGTCTA-CAGTTGTTAGCATGCTTGAAGGCAATGGTGATATT
rJMFF012M02+ CAGTCCTTAGGCCATCTATGTCTA-CAGTTGTTAGCATGCTTGAAGGCAATGGTGATATT
rJMSF027K20+ CAGTCCTTAGGCCATCTATGTCTACCAGTTGTTAGCATGCTTGAAGGCAATGGTGATATT
rJMSF045G23+ CAGTCCTTAGGCCATCTATGTCTA-CAGTTGTTAGCATGCTTGAAGGCAATGGTGATATT
                      ____________________________________________________________
consensus CAGTCCTTAGGCCATCTATGTCTA-CAGTTGTTAGCATGCTTGAAGGCAATGGTGATATT
 
. : . : . : . : . : . :
rJMFF019N05+ CTCGAGTACAAATCC
rJMFF012M02+ CTCGAGTACAAATCC
rJMSF027K20+ CTCGAGTACAAATCCAA
rJMSF045G23+ CTCGAGTACAAATCCAACATACGTGAATTAAATTTCCAAGCAGTGTGAGTTCATTATGAA
                      ____________________________________________________________
consensus CTCGAGTACAAATCCAACATACGTGAATTAAATTTCCAAGCAGTGTGAGTTCATTATGAA
 
. : . : . : . : . : . :
rJMSF045G23+ GAAATGTCAATTGGCTCAAGTGATTCTCCCAACAAAGTAGACATTTGTTCATAAGCAAAT
                      ____________________________________________________________
consensus GAAATGTCAATTGGCTCAAGTGATTCTCCCAACAAAGTAGACATTTGTTCATAAGCAAAT
 
. : . : . : . : . : . :
rJMSF045G23+ TAATTGTGAAAAGTTGCATAAAAAATAAAAGAAATTGTATTTTAATGTTGTATGAATCAT
                      ____________________________________________________________
consensus TAATTGTGAAAAGTTGCATAAAAAATAAAAGAAATTGTATTTTAATGTTGTATGAATCAT