Contig 005803:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047C06Sequence321002419 (3)ref|XP_004151854.1|90.1PREDICTED: tuftelin-interacting protein 11-like [Cucumis sativus] gb|KGN63340.1|372005803 (2)ref|XP_011098023.1|5e-23PREDICTED: septin and tuftelin-interacting protein 1 homolog 1 [Sesamum indicum
JMSF044E12Sequence722002419 (3)emb|CDP06007.1|7e-38unnamed protein product [Coffea canephora]794005803 (2)ref|XP_004248294.1|4e-31PREDICTED: septin and tuftelin-interacting protein 1 homolog 1 [Solanum lycoper

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF044E12+                                                        GGATCAGAGCTCAG
                      ____________________________________________________________
consensus                                                           GGATCAGAGCTCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF047C06+                                                             GCCAAAACC
rJMSF044E12+          CNTGAAAGAAGTAATAGAAGTTCATGCGCAGCAGAATGGNTTGCTATTCAAGCCAAAGCC
                      ____________________________________________________________
consensus             CNTGAAAGAAGTAATAGAAGTTCATGCGCAGCAGAATGGNTTGCTATTCAAGCCAAAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF047C06+          AGGCAGGATACATGATGGTCATCAAATATATGGCTTTGGTAGCATAAGCATAATAATAGA
rJMSF044E12+          AGGCAGGATACATGATGGTCATCAAATATATGGCTTTGGTAGCATAAGCATAATAATAGA
                      ____________________________________________________________
consensus             AGGCAGGATACATGATGGTCATCAAATATATGGCTTTGGTAGCATAAGCATAATAATAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF047C06+          TTCTCTGAATGAGAAGGTATTTGCACAAACTGAGGATAAATGGTCTCCCGCGTCTCTTGA
rJMSF044E12+          CTCTCTGAATCAGAAGGTATTGGCACAAACCGAGGATAAATGGTCTTTCGTGTCTCTTGA
                      ____________________________________________________________
consensus             TTCTCTGAATGAGAAGGTATTTGCACAAACTGAGGATAAATGGTCTTTCGTGTCTCTTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF047C06+          GCTGCTTTTGGAGTTACACAATCGATATAGTTTGAAAAGACGATGATAAAGCAA      
rJMSF044E12+          GCAGCTTTTGGAGTTACACAATCGATATAGTTTGAAGAGGCGATGATAAAGCAAGAAATC
                      ____________________________________________________________
consensus             GCTGCTTTTGGAGTTACACAATCGATATAGTTTGAAGAGGCGATGATAAAGCAAGAAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF044E12+          TTCTGTTTGATCCACAGATTACACTTTGTAGACTCTTTTTCCAGACAATAGACATGCTTT
                      ____________________________________________________________
consensus             TTCTGTTTGATCCACAGATTACACTTTGTAGACTCTTTTTCCAGACAATAGACATGCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF044E12+          TGTTAGCAGTGTTGATCCAAGAGTCATTCCCGTCTGAAACCACAGAAACTCCACTGCTGA
                      ____________________________________________________________
consensus             TGTTAGCAGTGTTGATCCAAGAGTCATTCCCGTCTGAAACCACAGAAACTCCACTGCTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF044E12+          AATGATAATCCAAGAAATGACAGAATATTGTTTAATGGTGATGGCAATCTAACCGAAGAC
                      ____________________________________________________________
consensus             AATGATAATCCAAGAAATGACAGAATATTGTTTAATGGTGATGGCAATCTAACCGAAGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF044E12+          TTGTACCTTAAACGGGTATGCTTTATTTATTCATATATTGTCAATGTTGGACGATAGCCT
                      ____________________________________________________________
consensus             TTGTACCTTAAACGGGTATGCTTTATTTATTCATATATTGTCAATGTTGGACGATAGCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF044E12+          AGACTCATAAATTTATAAACATTAGACACTCCAAAACGGGGCATTGAACGATCCATTTGG
                      ____________________________________________________________
consensus             AGACTCATAAATTTATAAACATTAGACACTCCAAAACGGGGCATTGAACGATCCATTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF044E12+          TCCAAACAGGAGTTTTCATGGAAAAAATTATCCAAGGTTGAGTTGAAAGATATTCATTGT
                      ____________________________________________________________
consensus             TCCAAACAGGAGTTTTCATGGAAAAAATTATCCAAGGTTGAGTTGAAAGATATTCATTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF044E12+          GTACCATTGTTCATCCCTTCTTCATTGTACTAGTGACTGGATAATGTTCCAAAAAAAAGG
                      ____________________________________________________________
consensus             GTACCATTGTTCATCCCTTCTTCATTGTACTAGTGACTGGATAATGTTCCAAAAAAAAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF044E12+          ATTAGTGTATGAATTGGAGATACAAAGTGCTTATTCTGCTGTAATTACATACAAGAGAAA
                      ____________________________________________________________
consensus             ATTAGTGTATGAATTGGAGATACAAAGTGCTTATTCTGCTGTAATTACATACAAGAGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF044E12+          ATTTCAATTTTGGTCCACTGACTATTGGGGTTGTGTTAATTGCAACACTGACTTCAAAAA
                      ____________________________________________________________
consensus             ATTTCAATTTTGGTCCACTGACTATTGGGGTTGTGTTAATTGCAACACTGACTTCAAAAA