Contig 005802:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS139C11+              GCCTCGAAAGGCCCCCCAAGCTTGCTGGGATGCTGCCTGTCAGGAGATTTTCTGATA
                      ____________________________________________________________
consensus                GCCTCGAAAGGCCCCCCAAGCTTGCTGGGATGCTGCCTGTCAGGAGATTTTCTGATA
 
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JMFS139C11+           AATCAATGACTGTGAGTTCTTTGCAGCTTCCCAGCTCTTCTGGGATGGTGCCCACTATGC
                      ____________________________________________________________
consensus             AATCAATGACTGTGAGTTCTTTGCAGCTTCCCAGCTCTTCTGGGATGGTGCCCACTATGC
 
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JMFS139C11+           TGTTCTGCCAAAGCAGCAAACTTTGAAGCTTTTCGAGCTTCCCCATGGTCCGGGGGATGG
                      ____________________________________________________________
consensus             TGTTCTGCCAAAGCAGCAAACTTTGAAGCTTTTCGAGCTTCCCCATGGTCCGGGGGATGG
 
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JMFS139C11+           GACCCGAGATTGAATTCTGGTACAAGTAGAGGTTCTGCAACTCACTGCAGTTCCCAATCT
                      ____________________________________________________________
consensus             GACCCGAGATTGAATTCTGGTACAAGTAGAGGTTCTGCAACTCACTGCAGTTCCCAATCT
 
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JMFS139C11+           CTTCTGGAATGGGGCCTGACAACAGTGATGTGTATATAGCTATGGTTTGAATCCTTTTCA
                      ____________________________________________________________
consensus             CTTCTGGAATGGGGCCTGACAACAGTGATGTGTATATAGCTATGGTTTGAATCCTTTTCA
 
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JMFS139C11+           GCTTGCCAATTGAGGATGGAAGCCCCCCGGAAATGCCTGTTTCTGCAAGGCCTAAAACTT
                      ____________________________________________________________
consensus             GCTTGCCAATTGAGGATGGAAGCCCCCCGGAAATGCCTGTTTCTGCAAGGCCTAAAACTT
 
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JMFS139C11+           GCAAGTTCTTGCAGTTCCCAATCTCAGAAGGTAATTCGCCTTTAAGATCCTGATTCCCAC
                      ____________________________________________________________
consensus             GCAAGTTCTTGCAGTTCCCAATCTCAGAAGGTAATTCGCCTTTAAGATCCTGATTCCCAC
 
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JMFS139C11+           CAGCCCTGAACACTTCAAGATTGCTCAGCTGCCCGAAGCTCCTAGGAATCTCCCCGCTGA
JMFS087F05+                                                     TAGGAATCTCCCCGCTGA
rJMSF044C15+                                                                     A
                      ____________________________________________________________
consensus             CAGCCCTGAACACTTCAAGATTGCTCAGCTGCCCGAAGCTCCTAGGAATCTCCCCGCTGA
 
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JMFS139C11+           TCTGGTTATCGTAGAGCGTTAGATACTTGAGGCTGGAGAGCCTCCCAATCTCTCCAGGAA
JMFS087F05+           TCTGGTTATCGTAGAGCGTTAGATACTTGAGGCTGGAGAGCCTCCCAATCTCTCCAGGAA
JMSF023A04+                                                             TCTCCAGGAA
JMFS164D08+                         AGCGTTAGATACTTGAGGCTGGAGAGCCTCCCAATCTCTCCAGGAA
rJMSF044C15+          TCTGGTTATCGTAGAGCGTTAGATACTTGAGGCTGGAGAGCCTCCCAATCTCTCCAGGAA
                      ____________________________________________________________
consensus             TCTGGTTATCGTAGAGCGTTAGATACTTGAGGCTGGAGAGCCTCCCAATCTCTCCAGGAA
 
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JMFS139C11+           TCCCACCTTCAAGCAAATTTGTGTTCAAACCCAAAGCCTGCAACTTTCCCAGATTACATA
JMFS087F05+           TCCCACCTTCAAGCAAATTTGTGTTCAAACCCAAAGCCTGCAACTTTCCCAGATTACATA
JMSF023A04+           TCCCACCTTCAAGCAAATTTGTGTTCAAACCCAAAGCCTGCAACTTTCCCAGATTACATA
JMFS164D08+           TCCCACCTTCAAGCAAATTTGTGTTCAAACCCAAAGCCTGCAACTTTCCCAGATTACATA
rJMSF044C15+          TCCCACCTTCAAGCAAATTTGTGTTCAAACCCAAAGCNTGCAACTTTCCCAGATTACATA
                      ____________________________________________________________
consensus             TCCCACCTTCAAGCAAATTTGTGTTCAAACCCAAAGCCTGCAACTTTCCCAGATTACATA
 
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JMFS139C11+           TCTCTTCTGGAATGGTCCCTGTGATTGA                                
JMFS087F05+           TCTCTTCTGGAATGGTCCCTGTGATTGAGTTGTCACTTATGTCAAGAACAACCAGCTCAA
JMSF023A04+           TCTCTTCTGGAATGGTCCCTGTGATTGAGTTGTCACTTATGTCAAGAACAACCAGCTCAA
JMFS164D08+           TCTCTTCTGGAATGGTCCCTGTGATTGAGTTGTCACTTATGTCAAGAACAACCAGCTCAA
rJMSF044C15+          TCTCTTCNGGAATGGTCCCTGTGATTGAGTTGTCACTTATGTCAAGAACAACCAGCTCAA
                      ____________________________________________________________
consensus             TCTCTTCTGGAATGGTCCCTGTGATTGAGTTGTCACTTATGTCAAGAACAACCAGCTCAA
 
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JMFS087F05+           GATAGTCCCCAAACTCCCTGGGAATAGAGCCTGAGAGATTGGCAGATGATATGATCAGAG
JMSF023A04+           GATAGTCCCCAAACTCCCTGGGAATAGAGCCTGAGAGATTGGCAGATGATATGATCAGAG
JMFS164D08+           GATAGTCCCCAAACTCCCTGGGAATAGAGCCTGAGAGATTGGCAGATGATATGATCAGAG
rJMSF044C15+          GATAGTCCCCAAACTCCCTGGGAATAGAGCCTGAGAGATTGGCAGATGATATGATCAGAG
                      ____________________________________________________________
consensus             GATAGTCCCCAAACTCCCTGGGAATAGAGCCTGAGAGATTGGCAGATGATATGATCAGAG
 
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JMFS087F05+           TATCCAATGATCTGAGAGGCTGCAAATTTGAAGGCAGTGGGCCTTGCAAATTCACTGCCT
JMSF023A04+           TATCCAATGATCTGAGAGGCTGCAAATTTGAAGGCAGTGGGCCTTGCAAATTCACTGCCT
JMFS164D08+           TATCCAATGATCTGAGAGGCTGCAAATTTGAAGGCAGTGGGCCTTGCAAATTCACTGCCT
rJMSF044C15+          TATCCAATGATCTGAGAGGCTGCAAATTTGAAGGCAGTGGGCCTTGCAAATTCACTGCCT
                      ____________________________________________________________
consensus             TATCCAATGATCTGAGAGGCTGCAAATTTGAAGGCAGTGGGCCTTGCAAATTCACTGCCT
 
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JMFS087F05+           TCAAGCTTATCTTCACAACTTCTCCATCTGAGTTGCAGAATATCCCAAACCAGGAACAAG
JMSF023A04+           TCAAGCTTATCTTCACAACTTCTCCATCTGAGTTGCAGAATATCCCAAACCAGGAACAAG
JMFS164D08+           TCAAGCTTATCTTCACAACTTCTCCATCTGAGTTGCAGAATATCCCAAACCAGGAACAAG
rJMSF044C15+          TCAAGCTTNTCTTCACAACTTCTCCATCTGAGTTGCAGAATATCCCAAACCAGGAACAAG
                      ____________________________________________________________
consensus             TCAAGCTTATCTTCACAACTTCTCCATCTGAGTTGCAGAATATCCCAAACCAGGAACAAG
 
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JMFS087F05+           GACTTTGGTCCACAGCATTCCATGACTTCAAAGCATCTGTTGAGCTGTTCAGCCTTGCCT
JMSF023A04+           GACTTTGGTCCACAGCATTCCATGACTTCAAAGCATCTGTTGAGCTGTTCAGCCTTGCCT
JMFS164D08+           GACTTTGGTCCACAGCATTCCATGACTTCAAAGCATCTGTTGAGCTGTTCAGCCTTGCCT
rJMSF044C15+          GACTTTGGTCCACAGCATTCCATGACTTCAAAGCATCTGTTGAGCTGTTCAGCCTTGCCT
                      ____________________________________________________________
consensus             GACTTTGGTCCACAGCATTCCATGACTTCAAAGCATCTGTTGAGCTGTTCAGCCTTGCCT
 
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JMFS087F05+           TCCATGCTAGAAGAGCTTGGCCCTGTGCATCAATGGAGTGGCCAGGAGAGAAGAAGAAGA
JMSF023A04+           TCCATGCTAGAAGAGCTTGGCCCTGTGCATCAATGGAGTGGCCAGGAGAGAAGAAGAAGA
JMFS164D08+           TCCATGCTAGAAGAGCTTGGCCCTGTGCATCAATGGAGTGGCCAGGAGAGAAGAAGAAGA
rJMSF044C15+          TCCATNCTAGAAGAGCTTGGCCCTGTGCATCAATGGAGTGGCCAGGAGAGAAGAAGAAGA
                      ____________________________________________________________
consensus             TCCATGCTAGAAGAGCTTGGCCCTGTGCATCAATGGAGTGGCCAGGAGAGAAGAAGAAGA
 
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JMFS087F05+           GGGAGTTTAGTGAAAGAAGTAGAAAGGTATAGGTGGAGAAAAGAGAAGGGCTTCTTAGAA
JMSF023A04+           GGGAGTTTAGTGAAAGAAGTAGAAAGGTATAGGTGGAGAAAAGAGAAGGGCTTCTTAGAA
JMFS164D08+           GGGAGTTTAGTGAAAGAAGTAGAAAGGTATAGGTGGAGAAAAGAGAAGGGCTTCTTAGAA
rJMSF044C15+          GGGAGTTTAGTGAAAGAAGTAGAAAGGTATAGGTGGAGAAAAGAGAAGGGCTTCTTAGAA
                      ____________________________________________________________
consensus             GGGAGTTTAGTGAAAGAAGTAGAAAGGTATAGGTGGAGAAAAGAGAAGGGCTTCTTAGAA
 
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JMFS087F05+           GTGCAGGCATTGGTGAGTGGTGAGAGAGCAAAGAAGAAGGTGATGAGTTCTTTGGGATTG
JMSF023A04+           GTGCAGGCATTGGTGAGTGGTGAGAGAGCAAAGAAGAAGGTGATGAGTTCTTTGGGATTG
JMFS164D08+           GTGCAGGCATTGGTGAGTGGTGAGAGAGCAAAGAAGAAGGTGATGAGTTCTTTGGGATTG
rJMSF044C15+          GTGCAGGCATTGGTGAGTGGTGAGAGAGCAAAGAAGAAGGTGATGAGTTCTTTGGGATTG
                      ____________________________________________________________
consensus             GTGCAGGCATTGGTGAGTGGTGAGAGAGCAAAGAAGAAGGTGATGAGTTCTTTGGGATTG
 
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JMFS087F05+           TAGAGGGGG                                                   
JMSF023A04+           TAGAGGGGGGAACCCCATGTTTTGTTTATA                              
JMFS164D08+           TAGAGGGGGGAACCCCATGTTTTGTTTATA                              
rJMSF044C15+          TAGAGGGGGGAACCCCATGTTTTGTTTATAACAAGAAAACCAGAAGATCTGGATCCCAGA
                      ____________________________________________________________
consensus             TAGAGGGGGGAACCCCATGTTTTGTTTATAACAAGAAAACCAGAAGATCTGGATCCCAGA
 
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rJMSF044C15+          CAAGCTTACAATTTTCTATTATTATTGTACTTGGGGAAATGGCTGTTGATTGGGAGAATG
                      ____________________________________________________________
consensus             CAAGCTTACAATTTTCTATTATTATTGTACTTGGGGAAATGGCTGTTGATTGGGAGAATG