| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF012D05 | Sequence | 437 | 002138 (4) | gb|AGT57961.1| | 3e-59 | 4-alpha-glucanotransferase [Ipomoea batatas] | 758 | 005800 (4) | gb|AGT57961.1| | 3e-87 | 4-alpha-glucanotransferase [Ipomoea batatas] |
| JMSF029P17 | Sequence | 631 | 002138 (4) | gb|AGT57961.1| | 1e-108 | 4-alpha-glucanotransferase [Ipomoea batatas] | 178 | 005800 (4) | |||
| JMSF043K03 | Sequence | 714 | 002138 (4) | gb|AGT57961.1| | 1e-128 | 4-alpha-glucanotransferase [Ipomoea batatas] | 743 | 005800 (4) | gb|AGT57961.1| | 4e-70 | 4-alpha-glucanotransferase [Ipomoea batatas] |
| JMSF051L15 | Sequence | 630 | 002138 (4) | gb|AGT57961.1| | 7e-108 | 4-alpha-glucanotransferase [Ipomoea batatas] | 731 | 005800 (4) | gb|AGT57961.1| | 4e-81 | 4-alpha-glucanotransferase [Ipomoea batatas] |
This contig is upended
. : . : . : . : . : . :
rJMSF051L15+ G
rJMSF012D05+ ACCTGGAATGGCTGTCCTGCAATTTG
____________________________________________________________
consensus ACCTGGAATGGCTGTCCTGCAATTTG
. : . : . : . : . : . :
rJMSF051L15+ GCTTTGGAAGTGATGCTGAAAACCCTCACTTGCCTCATAACCATGAGTGCAACCAAGTAG
rJMSF012D05+ GCTTTGGAAGTGATGCTGAAAACCCTCACTTGCCTCATAACCATGAGTGCAACCAAGTAG
rJMSF043K03+ TAACCATGAGTGCAACCAAGTAG
____________________________________________________________
consensus GCTTTGGAAGTGATGCTGAAAACCCTCACTTGCCTCATAACCATGAGTGCAACCAAGTAG
. : . : . : . : . : . :
rJMSF051L15+ TATATACTGGGACTCATGATAATGACACGATCCAAGGCTGGTGGGATGGCCTGCCACAAG
rJMSF012D05+ TATATACTGGGACTCATGATAATGACACGATCCAAGGCTGGTGGGATGGCCTGCCACAAG
rJMSF043K03+ TATATACTGGGACTCATGATAATGACACGATCCAAGGCTGGTGGGATGGCCTGCCACAAG
____________________________________________________________
consensus TATATACTGGGACTCATGATAATGACACGATCCAAGGCTGGTGGGATGGCCTGCCACAAG
. : . : . : . : . : . :
rJMSF051L15+ AAGAGAAATCCAATGTACTAAAGTATCTTCCAAGCATTGATGAGCATGAAATTTCCTGGG
rJMSF012D05+ AAGAGAAATCCAATGTACTAAAGTATCTTCCAAGCATTGATGAGCATGAAATTTCCTGGG
rJMSF043K03+ AAGAGAAATCCAATGTACTAAAGTATCTTCCAAGCATTGATGAGCATGAAATTTCCTGGG
____________________________________________________________
consensus AAGAGAAATCCAATGTACTAAAGTATCTTCCAAGCATTGATGAGCATGAAATTTCCTGGG
. : . : . : . : . : . :
rJMSF051L15+ GCCTAATCCAGGCTGCACTTGCTTCAGTGGCACAAACCACTATCATACCCATGCAAGATA
rJMSF012D05+ GCCTAATCCAGGCTGCACTTGCTTCAGTGGCACAAACCACTATCATACCCATGCAAGATA
rJMSF043K03+ GCCTAATCCAGGCTGCACTTGCTTCAGTGGCACAAACCACTATCATACCCATGCAAGATA
____________________________________________________________
consensus GCCTAATCCAGGCTGCACTTGCTTCAGTGGCACAAACCACTATCATACCCATGCAAGATA
. : . : . : . : . : . :
rJMSF051L15+ TCCTTGGCCTTGGAACTTCTGCTAGGATGAATATTCCTGCAACTCAGTTTGGGAATTGGA
rJMSF012D05+ TCCTTGGCCTTGGAACTTCTGCTAGGATGAATATTCCTGCAACTCAGTTTGGGAATTGGA
rJMSF043K03+ TCCTTGGCCTTGGAACTTCTGCTAGGATGAATATTCCTGCAACTCAGTTTGGGAATTGGA
____________________________________________________________
consensus TCCTTGGCCTTGGAACTTCTGCTAGGATGAATATTCCTGCAACTCAGTTTGGGAATTGGA
. : . : . : . : . : . :
rJMSF051L15+ GTTGGAGAATACCTCGTTCTATCAGCTTTGACAGCTTGGGCAACGAAGCAAAGAAGTTAA
rJMSF012D05+ GTTGGAGAATACCTCGTTCTATCAGCTTTGACAGCTTGGGCAACGAAGCAAAGAAGTTAA
rJMSF043K03+ GTTGGAGAATACCTCGTTCTATCAGCTTTGACAGCTTGGGCAACGAAGCAAAGAAGTTAA
____________________________________________________________
consensus GTTGGAGAATACCTCGTTCTATCAGCTTTGACAGCTTGGGCAACGAAGCAAAGAAGTTAA
. : . : . : . : . : . :
rJMSF051L15+ GAGATATGCTAGGCACTTATGGGCGGTTATAATGGCCAGTAATCGCTTGAGATATCAGAA
rJMSF012D05+ GAGATATGCTAGGCACTTATGGGCGGTTATAATGGCCAGTAATCGCTTGAGATATCAGAA
rJMSF043K03+ GAGATATGCTAGGCACTTATGGGCGGTTATAATGGCCAGTAATCGCTTGAGATATCAGAA
____________________________________________________________
consensus GAGATATGCTAGGCACTTATGGGCGGTTATAATGGCCAGTAATCGCTTGAGATATCAGAA
. : . : . : . : . : . :
rJMSF051L15+ GTGAATAACTAGCTTGGTCACAATTACTCTAGGCTGGCTCGAGCTAGATGCAGATGGCCA
rJMSF012D05+ GTGAATAACTAGCTTGGTCACAATTACTCTAGGCTGGCTCGAGCTAGATGCAGATGGCCA
rJMSF029P17+ AGCTAGATGCAGATGGCCA
rJMSF043K03+ GTGAATAACTAGCTTGGTCACAATTACTCTAGGCTGGCTCGAGCTAGATGCAGATGGCCA
____________________________________________________________
consensus GTGAATAACTAGCTTGGTCACAATTACTCTAGGCTGGCTCGAGCTAGATGCAGATGGCCA
. : . : . : . : . : . :
rJMSF051L15+ TACAGTCAAATAAAAGAGGTTCAAAAGCTGTTGCTGTGAAGGGCTTTGGTCTCACATTTT
rJMSF012D05+ TACAGTCAAATAAAAGAGGTTCAAAAGCTGTTGCTGTGAAGGGCTTTGGTCTCACATTTT
rJMSF029P17+ TACAGTCAAATAAAAGAGGTTCAAAAGCTGTTGCTGTGAAGGGCTTTGGTCTCACANTTT
rJMSF043K03+ TACAGTCAAATAAAAGAGGTTCAAAAGCTGTTGCTGTGAAGGGCTTTGGTCTCACATTTT
____________________________________________________________
consensus TACAGTCAAATAAAAGAGGTTCAAAAGCTGTTGCTGTGAAGGGCTTTGGTCTCACATTTT
. : . : . : . : . : . :
rJMSF051L15+ ATATTCAATAGTTCCTGAAATCGTCCGACAGCTGAGAAAGGTAAATAAAAGAGAAGCAAA
rJMSF012D05+ ATATTCAATAGTTCCTGAAATCGTCCGACAGCTGAGAAAGGTAAATAAAAGAGAAGCAAA
rJMSF029P17+ CTATTCAATAGTTCCTGANATCGTCCGACAGCTGNGAAAGGTAAATAAAAGAGAAGCAAA
rJMSF043K03+ ATATTCAATAGTTCCTGAAATCGTCCGACAGCTGAGAAAGGTAAATAAAAGAGAAGCAAA
____________________________________________________________
consensus ATATTCAATAGTTCCTGAAATCGTCCGACAGCTGAGAAAGGTAAATAAAAGAGAAGCAAA
. : . : . : . : . : . :
rJMSF051L15+ AAGAATAAACAAACCTATTTCAACGGTACGGTAATATGGTTGTAGTTGTTGGTGTGTTGG
rJMSF012D05+ AAGAATAAACAAACCTATTTCAACGGTACGGTAATATGGTTGTAGTTGTTGGTGTGTTGG
rJMSF029P17+ AAGAATAAACAAACCTATTTCAACGGTNCGGNAATATGG
rJMSF043K03+ AAGAATAAACAAACCTATTTCAACGGTACGGTAATATGGTTGTAGTTGTTGGTGTGTTGG
____________________________________________________________
consensus AAGAATAAACAAACCTATTTCAACGGTACGGTAATATGGTTGTAGTTGTTGGTGTGTTGG
. : . : . : . : . : . :
rJMSF051L15+ TATTAGTTTATATGACATGAGAGTCCAAGCTTGTAAAATAAC
rJMSF012D05+ TATTAGTTTATATGACATGAGAGTCCAAGCTTGTAAAATAAC
rJMSF043K03+ TATTAGTTTATATGACATGAGAGTCCAAGCTTGTAAAATAACGGCAAGACTTTGGAGAAT
____________________________________________________________
consensus TATTAGTTTATATGACATGAGAGTCCAAGCTTGTAAAATAACGGCAAGACTTTGGAGAAT
. : . : . : . : . : . :
rJMSF043K03+ CGAAGATTCNGTTTATGTTTTCAAGTATATGTATATGTGGTGNTGTTGATCGATTTTGAT
____________________________________________________________
consensus CGAAGATTCNGTTTATGTTTTCAAGTATATGTATATGTGGTGNTGTTGATCGATTTTGAT