Contig 005791:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032B14Sequence519001715 (4)ref|XP_009626180.1|3e-08PREDICTED: uncharacterized protein At1g04910-like [Nicotiana tomentosiformis]691005791 (2)ref|XP_010327510.1|9e-78PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum lycopersi
JMSF042F17Sequence734001715 (4)ref|XP_009626180.1|9e-51PREDICTED: uncharacterized protein At1g04910-like [Nicotiana tomentosiformis]742005791 (2)ref|XP_010327510.1|1e-71PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum lycopersi

Alignment

This contig is upended


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rJMFF032B14+                                                                    GA
rJMSF042F17+                                                TCTGCAGCCATTGATCAAAGAA
                      ____________________________________________________________
consensus                                                   TCTGCAGCCATTGATCAAAGGA
 
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rJMFF032B14+          ATTCCCGCATTTNTACAACAAGGAAGACCTCGCCTTGCCAGGGGAGCTCGAGGCGTTTGC
rJMSF042F17+          TTCCCCGCATTTCTACAACAAGGAAGACCTCGCCTTGCCAGGGGAGCTCGAGGCGTTTGC
                      ____________________________________________________________
consensus             TTTCCCGCATTTCTACAACAAGGAAGACCTCGCCTTGCCAGGGGAGCTCGAGGCGTTTGC
 
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rJMFF032B14+          AAAGAAAGCGTCCATTATGGCTGCTATCGACTATATCGTTTCTGAGAACAGCGATGTCTT
rJMSF042F17+          AAAGAAAGCGTCCATTATGGCTGCTATCGACTATATCGTTTCTGAGAACAGCGATGTCTT
                      ____________________________________________________________
consensus             AAAGAAAGCGTCCATTATGGCTGCTATCGACTATATCGTTTCTGAGAACAGCGATGTCTT
 
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rJMFF032B14+          CATGCCATCGCACGGTGGGAACATGGGCCACGCTCTTCAGGGACACAGGGCATATGCAGG
rJMSF042F17+          CATGCCATCGCACGGTGGGAACATGGGCCACGCTCTTCAGGGACACAGGGCATATGCAGG
                      ____________________________________________________________
consensus             CATGCCATCGCACGGTGGGAACATGGGCCACGCTCTTCAGGGACACAGGGCATATGCAGG
 
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rJMFF032B14+          CCATAAAAAGACTATAACTCCGAACAAAAGACAGATGATCCCGCACTTCATGAACGCATC
rJMSF042F17+          CCATAAAAAGACTATAACTCCGAACAAAAGACAGATGATCCCGCACTTCATGAACGCATC
                      ____________________________________________________________
consensus             CCATAAAAAGACTATAACTCCGAACAAAAGACAGATGATCCCGCACTTCATGAACGCATC
 
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rJMFF032B14+          GCTCTCTGAATCGGACTTCAACAGGATCATATCGTACTTGCATCGAGATTCCTTGGGTCA
rJMSF042F17+          GCTCTCTGAATCGGACTTCAACAGGATCATATCGTACTTGCATCGAGATTCCTTGGGTCA
                      ____________________________________________________________
consensus             GCTCTCTGAATCGGACTTCAACAGGATCATATCGTACTTGCATCGAGATTCCTTGGGTCA
 
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rJMFF032B14+          GCCAGAGCTCAGGAAACCGGGAAGGGATATCACCAAGTATCCTGTACCCGATTGTATGTG
rJMSF042F17+          GCCAGAGCTCAGGAAACCGGGAAGGGATATCACCAAGTATCCTGTACCCGATTGTATGTG
                      ____________________________________________________________
consensus             GCCAGAGCTCAGGAAACCGGGAAGGGATATCACCAAGTATCCTGTACCCGATTGTATGTG
 
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rJMFF032B14+          CAACAGCAACACAGGTCATTCTTCTGTCTAGAAATCTCATTCAACTTCTAAATCCCGCCC
rJMSF042F17+          CAACAGCAACACAGGTCATTCTTCTGTCTAGAAATCTCATTCAACTTCTAAATCCCGCCC
                      ____________________________________________________________
consensus             CAACAGCAACACAGGTCATTCTTCTGTCTAGAAATCTCATTCAACTTCTAAATCCCGCCC
 
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rJMFF032B14+          GTTAGCCCCTATGAATTAGCAATCTCGAGATTTCAAGCACACATAAACCCGATTGGAATG
rJMSF042F17+          GTTAGCCCCTATGAATTAGCAATCTCGAGATTTCAAGCACACATAAACCCGATTGGAATG
                      ____________________________________________________________
consensus             GTTAGCCCCTATGAATTAGCAATCTCGAGATTTCAAGCACACATAAACCCGATTGGAATG
 
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rJMFF032B14+          AGCATGGGGATAGACACGATTATTTGGCAGAGGTTATAATCTGTAGGAAACACAGGCCTA
rJMSF042F17+          AGCATGGGGATAGACACGATTATTTGGCAGAGGTTATAATCTGTAGGAAACACAGGCCTA
                      ____________________________________________________________
consensus             AGCATGGGGATAGACACGATTATTTGGCAGAGGTTATAATCTGTAGGAAACACAGGCCTA
 
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rJMFF032B14+          ATATGGTTTCATTTTTTGGTTATTTTCTTCAATTCTTTGTATATGTAGCCCTTAGAAGGA
rJMSF042F17+          ATATGGTTTCATTTTTTGGTTATTTTCTTCAATTCTTTGTATATGTAGCCCTTAGAAGGA
                      ____________________________________________________________
consensus             ATATGGTTTCATTTTTTGGTTATTTTCTTCAATTCTTTGTATATGTAGCCCTTAGAAGGA
 
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rJMFF032B14+          GTAGAGAAGGCAAAATATGATCATTGTATAGGAAATTAAATTAAA               
rJMSF042F17+          GTAGAGAAGGCAAAATATGATCATTGTATAGGAAATTAAATTAAATGCCGACTTTATTAT
                      ____________________________________________________________
consensus             GTAGAGAAGGCAAAATATGATCATTGTATAGGAAATTAAATTAAATGCCGACTTTATTAT
 
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rJMSF042F17+          TATTCAATTCATTCTTTATACTTGTATCAGTTGTATGTAATCAATTAGCAATAGCAGATT
                      ____________________________________________________________
consensus             TATTCAATTCATTCTTTATACTTGTATCAGTTGTATGTAATCAATTAGCAATAGCAGATT