| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016A16 | Sequence | 577 | 005789 (17) | gb|KEH16337.1| | 4e-86 | ubiquinone biosynthesis protein coq-8, putative, partial [Medicago truncatula] | 760 | 005789 (17) | ref|XP_009333709.1| | 1e-69 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl |
| JMFF045F18 | Sequence | 647 | 005789 (17) | ref|XP_002274556.1| | 9e-85 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chl | 610 | 005789 (17) | ref|XP_009333709.1| | 2e-55 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl |
| JMSF007P09 | Sequence | 243 | 002402 (18) | ref|XP_011084352.1| | 8e-08 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | 766 | 005789 (17) | ref|XP_008236447.1| | 2e-60 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chl |
| JMSF011P16 | Sequence | 178 | 002402 (18) | 775 | 005789 (17) | ref|XP_008236447.1| | 7e-56 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chl | |||
| JMSF013D11 | Sequence | 508 | 002402 (18) | ref|XP_011040978.1| | 6e-48 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chl | 777 | 005789 (17) | ref|XP_008236447.1| | 3e-61 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chl |
| JMSF014C12 | Sequence | 496 | 002402 (18) | ref|XP_011084352.1| | 4e-39 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | 793 | 005789 (17) | ref|XP_009333709.1| | 4e-43 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl |
| JMSF016M10 | Sequence | 474 | 002402 (18) | ref|XP_011084352.1| | 1e-42 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | 742 | 005789 (17) | ref|XP_009333709.1| | 2e-53 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl |
| JMSF016N10 | Sequence | 474 | 002402 (18) | ref|XP_011084352.1| | 1e-42 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | 716 | 005789 (17) | ref|XP_009333709.1| | 5e-51 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl |
| JMSF020O16 | Sequence | 674 | 002402 (18) | ref|XP_004237543.1| | 3e-72 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | 755 | 005789 (17) | ref|XP_008236447.1| | 8e-56 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chl |
| JMSF025A07 | Sequence | 628 | 002402 (18) | ref|XP_011040978.1| | 7e-61 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chl | 759 | 005789 (17) | ref|XP_008236447.1| | 2e-54 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chl |
| JMSF034E06 | Sequence | 628 | 005789 (17) | ref|XP_003591929.1| | 80.1 | aarF domain-containing protein kinase, putative [Medicago truncatula] | |||||
| JMSF042C17 | Sequence | 733 | 002402 (18) | ref|XP_004237543.1| | 7e-67 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | 782 | 005789 (17) | ref|XP_008236447.1| | 1e-55 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chl |
| JMSF042H12 | Sequence | 733 | 002402 (18) | ref|XP_004237543.1| | 6e-87 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | 817 | 005789 (17) | ref|XP_008236447.1| | 2e-73 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chl |
| JMSF043I08 | Sequence | 789 | 002402 (18) | ref|XP_004237543.1| | 2e-88 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | 778 | 005789 (17) | ref|XP_009333709.1| | 3e-48 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl |
| JMSF052L19 | Sequence | 666 | 002402 (18) | ref|XP_004237543.1| | 1e-71 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | 876 | 005789 (17) | ref|XP_009333709.1| | 4e-73 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl |
This contig is upended
. : . : . : . : . : . :
JMSF034E06- GCTAATAGAAATGGTTG
____________________________________________________________
consensus GCTAATAGAAATGGTTG
. : . : . : . : . : . :
JMSF034E06- ACTAATATTAACCCTACATCTACCCTTCACTCAATCAGATCAGATCGAAATCAACCATTA
____________________________________________________________
consensus ACTAATATTAACCCTACATCTACCCTTCACTCAATCAGATCAGATCGAAATCAACCATTA
. : . : . : . : . : . :
JMSF034E06- CCATCAGATCTCTGCACCGTATCGCTCCGATCTGCTCCGATCTTCAACACGTACCGTCTC
____________________________________________________________
consensus CCATCAGATCTCTGCACCGTATCGCTCCGATCTGCTCCGATCTTCAACACGTACCGTCTC
. : . : . : . : . : . :
JMSF034E06- TGCCGATCGTCTGACGCCGCCGGCCACCCACCGCCACAACACTCACCGCGTCGCACCGCC
____________________________________________________________
consensus TGCCGATCGTCTGACGCCGCCGGCCACCCACCGCCACAACACTCACCGCGTCGCACCGCC
. : . : . : . : . : . :
JMSF034E06- ACCATCAGATCAGATCGAAATCATACTCTCACCTCGTACATGCTCCGCACTGTATCGCTC
____________________________________________________________
consensus ACCATCAGATCAGATCGAAATCATACTCTCACCTCGTACATGCTCCGCACTGTATCGCTC
. : . : . : . : . : . :
JMSF034E06- CGATCTTCAACACCGTCTCTGCCGATCGTGATTACAAGTTTGAATAAATAAGAGCTTATG
____________________________________________________________
consensus CGATCTTCAACACCGTCTCTGCCGATCGTGATTACAAGTTTGAATAAATAAGAGCTTATG
. : . : . : . : . : . :
JMSF034E06- AAACATGTTGGAACCTAATTAGCTTCATTCTATGTTGTAGGTTGGATTATCTCCTGCTGC
____________________________________________________________
consensus AAACATGTTGGAACCTAATTAGCTTCATTCTATGTTGTAGGTTGGATTATCTCCTGCTGC
. : . : . : . : . : . :
JMSF034E06- AAAAACCATACATTCTAGGTTGAATGTTACAGTTCCCAGAGAGCCTAACTTAGAAACTCA
____________________________________________________________
consensus AAAAACCATACATTCTAGGTTGAATGTTACAGTTCCCAGAGAGCCTAACTTAGAAACTCA
. : . : . : . : . : . :
JMSF034E06- AGGTTGATTATGCTATGGACATACACAAATCCCTCTATCACACTGAAGATGTCCCACAAG
JMFF016A16- AAG
JMFF045F18- AAG
____________________________________________________________
consensus AGGTTGATTATGCTATGGACATACACAAATCCCTCTATCACACTGAAGATGTCCCACAAG
. : . : . : . : . : . :
JMSF034E06- GATTAGCAATGGCTGCAGATCCAAAGTTTAAAACATTTGAAGCTGCTTATCCCTATGTTG
JMFF016A16- GATTAGCAATGGCTGCAGATCCAAAGTTTAAAACATTTGAAGCTGCTTACCCCTATGTTG
JMFF045F18- GATTAGCAATGGCTGCAGATCCAAAGTTTAAAACATTTGAAGCTGCTTACCCCTATGTTG
rJMSF042H12+ TGAAGCTGCTTACCCCTATGTTG
____________________________________________________________
consensus GATTAGCAATGGCTGCAGATCCAAAGTTTAAAACATTTGAAGCTGCTTACCCCTATGTTG
. : . : . : . : . : . :
JMSF034E06- TTCGGAAACTTCTCACAGATAATTCACCTGCCATGAGGAAGATCCTACACTCTGTGGTCC
JMFF016A16- TTCGGAAACTTCTCACAGATAATTCACCTGCCATGAGGAAGATCCTACACTCTGTGGTCC
JMFF045F18- TTCGGAAACTTCTCACAGATAATTCACCTGCCATGAGGAAGATCCTACACTCTGTGGTCC
rJMFF016A16+ GAGGAAGATCNTACACTCTGTGGTCC
rJMSF042H12+ TTCGGAAACTTCTCACAGATAATTCACCTGCCATGAGGAAGATCCTACACTCTGTGGTCC
____________________________________________________________
consensus TTCGGAAACTTCTCACAGATAATTCACCTGCCATGAGGAAGATCCTACACTCTGTGGTCC
. : . : . : . : . : . :
JMSF034E06- TGAATAGAAGG
JMFF016A16- TGAATAGAAGGAAAGAATT-CCGATGGAAAAGGCTTTCTCTTTTCTTAAGAGTTGGAGCA
JMFF045F18- TGAATAGAAGGAAAGAATT-CCGATGGAAAAGGCTTTCTCTTTTCTTAAGAGTTGGAGCA
rJMFF016A16+ TGAATAGAAGGAAAGAATTCCCGATGGAAAAGGCTTTCTCTTTTCTTAAGAGTTGGAGCA
rJMSF042H12+ TGAATAGAAGGAAAGAATT-CCAATGGAAAAGGCTTTCTCTTTTCTTAAGAGTTGGAGCA
rJMSF052L19+ GAATAGAAGGAAAGAATT-CCAATGGAAAAGGCTTTCTCTTTTCTTAAGAGTTGGAGCA
____________________________________________________________
consensus TGAATAGAAGGAAAGAATT-CCGATGGAAAAGGCTTTCTCTTTTCTTAAGAGTTGGAGCA
. : . : . : . : . : . :
JMFF016A16- ACTAGGAAAGGGTTGCATTCTGTGCTGGGGTCCAACTCTCAAGAATCACTTGTTTATTCT
JMFF045F18- ACTAGGAAAGGGTTGCATTCTGTGCTGGGGTCCAACTCTCAAGAATCACTTGTTTATTCT
rJMFF016A16+ ACTAGGAAAGGGTTGCATTCTGTGCTGGGGTCCAACTCTCAAGAATCACTTGTTTATTCT
rJMSF042H12+ ACTAGGAAAGGGTTGCATTCTGTGCTGGGGTCCAACTCTCAAGAATCACTTGTTTATTCT
rJMSF007P09+ AGGAAAGGGTTGCATTCTGTGCTGGGGTCCAACTCTCAAGAATCACTTGTTTATTCT
rJMSF013D11+ ACTAGGAAAGGGTTGCATTCTGTGCTGGGGTCCAACTCTCAAGAATCACTTGTTTATTCT
rJMSF016M10+ T
rJMSF011P16+ AGAATCACTTGTTTATTCT
rJMSF014C12+ CTGTGCTGGGGTCCAACTCTCAAGAATCACTTGTTTATTCT
rJMSF020O16+ ACTCTCAAGAATCACNTGTTTATTCT
rJMSF052L19+ ACTAGGAAAGGGTTGCATTCTGTGCTGGGGTCCAACTCTCAAGAATCACTTGTTTATTCT
rJMSF042C17+ TCT
____________________________________________________________
consensus ACTAGGAAAGGGTTGCATTCTGTGCTGGGGTCCAACTCTCAAGAATCACTTGTTTATTCT
. : . : . : . : . : . :
JMFF016A16- GCCAAGGAAGTCAGTGGGACAGTTGATGTTGCAAA-CTTGGTGGTAAGATTACTACCCTC
JMFF045F18- GCCAAGGAAGTCAGTGGGACAGTTGATGTTGCAAA-CTTGGTGGTAAGATTACTACCCTC
rJMFF016A16+ GCCAAGGAAGTCAGTGGGACAGTTGATGTTGCAAA-CTTGGTGGTAAGATTACTACCCTC
rJMSF042H12+ GCCAAGGAAGTCAGTGGGACAGTTGATGTTGCAAA-CTTGGTGGTAAGATTACTACCCTC
rJMSF007P09+ GCCAAGGAAGTCAGTGGGACAGTTGATGTTGCAAA-CTTGGTGGTAAGATTACTACCCTC
rJMSF013D11+ GCCAAGGAAGTCAGTGGGACAGTTGATGTTGCAAA-CTTGGTGGTAAGATTACTACCCTC
rJMSF016M10+ GCCAAGGAAGTCAGTGGGACAGTNGATGTTGCAAA-CTTGGTGGTAAGATTACTACCCTC
rJMFF045F18+ GGACAGTTGATGTTGCAAA-CTTGGTGGTAAGATTACTACCCTC
rJMSF011P16+ GCCAAGGAAGTCAGTGGGACAGTTGATGTTGCAAA-CTTGGTGGTAAGATTACTACCCTC
rJMSF014C12+ GCCAAGGAAGTCAGTGGGACAGTTGATGTTGCAAA-CTTGGTGGTAAGATTACTACCCTC
rJMSF020O16+ GCCAAGGAAGTCAGTGGGACAGTTGATGTTGCAAA-CTTGGTGGTAAGATTACTACCCTC
rJMSF052L19+ GCCAAGGAAGTCAGTGGGACAGTTGATGTTGCAAA-CTTGGTGGTAAGATTACTACCCTC
rJMSF043I08+ GCCAAGGAAGTCAGTGGGACAGTTGATGTTGCAAANCTTGGTGGTAAGATTACTACCCTC
rJMSF025A07+ AGGAAGTCAGTGGGACAGTTGATGGTGCAAA-CTTGGTGGTAAGATTACTACCCTC
rJMSF016N10+ GTGGTAAGATTACTACCCTC
rJMSF042C17+ GCCCAGGAAGTCAGTGGGACAGTTGATGTTGCAAA-CTTGGTGGTAAGATTACTACCCTC
____________________________________________________________
consensus GCCAAGGAAGTCAGTGGGACAGTTGATGTTGCAAA-CTTGGTGGTAAGATTACTACCCTC
. : . : . : . : . : . :
JMFF016A16- TAAAGATGGTGCAGTGCTAAGAANGCTCCTGATGACAGC
JMFF045F18- TAAAGATGGTGCAGTGCTTAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
rJMFF016A16+ TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
rJMSF042H12+ TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
rJMSF007P09+ TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
rJMSF013D11+ TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
rJMSF016M10+ TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
rJMFF045F18+ TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
rJMSF011P16+ TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
rJMSF014C12+ TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
rJMSF020O16+ TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
rJMSF052L19+ TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
rJMSF043I08+ TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
rJMSF025A07+ TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
rJMSF016N10+ TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
rJMSF042C17+ TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
____________________________________________________________
consensus TAAAGATGGTGCAGTGCTAAGAAGGCTCCTGATGACAGCAGACGGAGCTTCATTATTTCG
. : . : . : . : . : . :
JMFF045F18- TGNCATGGTTTCAGAGGAGGCAAATGTCTTCC
rJMFF016A16+ TGCAATGGTTTCAGAGGAGGCAAATGTCTTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
rJMSF042H12+ TGCAATGGTTTCAGAGGAGGCAAATGTCTTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
rJMSF007P09+ TGCAATGGTTTCAGAGGAGGCAAATGTCTTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
rJMSF013D11+ TGCAATGGTTTCAGAGGAGGCAAATGTCTTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
rJMSF016M10+ TGCAATGGTTTCAGAGGAGGCAAATGTCNTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
rJMFF045F18+ TGCAATGGTTTCAGAGGAGGCAAATGTCTTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
rJMSF011P16+ TGCAATGGTTTCAGAGGAGGCAAATGTCTTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
rJMSF014C12+ TGCAATGGTTTCAGAGGAGGCAAATGTCTTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
rJMSF020O16+ TGCAATGGTTTCAGAGGAGGCAAATGTCTTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
rJMSF052L19+ TGCAATGGTTTCAGAGGAGGCAAATGTCTTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
rJMSF043I08+ TGCAATGGTTTCAGAGGAGGCAAATGTCTTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
rJMSF025A07+ TGCAATGGTTTCAGAGGAGGCAAATGTCTTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
rJMSF016N10+ TGCAATGGTTTCAGAGGAGGCAAATGTCTTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
rJMSF042C17+ TGCAATGGTTTCAGAGGAGGCAAATGTCTTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
____________________________________________________________
consensus TGCAATGGTTTCAGAGGAGGCAAATGTCTTCCGTCAACATTTCTGCAGGGTTCTTGCAGA
. : . : . : . : . : . :
rJMFF016A16+ TGTACTGTATCAATGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTTCAGTTCCGACGT
rJMSF042H12+ TGTACTGTATCAATGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTT-AGTTCCGACGT
rJMSF007P09+ TGTACTGTATCAATGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTTCAGTTCCGACGT
rJMSF013D11+ TGTACTGTATCAATGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTTCAGTTCCGACGT
rJMSF016M10+ TGTACTGTATCAANGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTTCAGTTCCGACGT
rJMFF045F18+ TGTACTGTATCAATGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTTCAGTTCCGACGT
rJMSF011P16+ TGTACTGTATCAATGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTTCAGTTCCGACGT
rJMSF014C12+ TGTACTGTATCAATGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTTCAGTTCCGACGT
rJMSF020O16+ TGTACTGTATCAATGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTTCAGTTCCGACGT
rJMSF052L19+ TGTACTGTATCAATGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTTCAGTTCCGACGT
rJMSF043I08+ TGTACTGTATCAATGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTTCAGTTCCGACGT
rJMSF025A07+ TGTACTGTATCAATGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTTCAGTTCCGACGT
rJMSF016N10+ TGTACTGTATCAATGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTTCAGTTCCGACGT
rJMSF042C17+ TGTACTGTATCAATGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTTCAGTTCCGACGT
____________________________________________________________
consensus TGTACTGTATCAATGGATGTCTAAAGCTCTGGGAAAAGCTACACAGTTCAGTTCCGACGT
. : . : . : . : . : . :
rJMFF016A16+ TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
rJMSF042H12+ TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
rJMSF007P09+ TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
rJMSF013D11+ TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
rJMSF016M10+ TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
rJMFF045F18+ TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
rJMSF011P16+ TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
rJMSF014C12+ TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
rJMSF020O16+ TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
rJMSF052L19+ TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
rJMSF043I08+ TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
rJMSF025A07+ TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
rJMSF016N10+ TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
rJMSF042C17+ TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
____________________________________________________________
consensus TCAGTTGGCAACTGGAACGGCTATCTATGATTATAAACTGATCCTGAGAGATCAACGGCT
. : . : . : . : . : . :
rJMFF016A16+ CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
rJMSF042H12+ CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
rJMSF007P09+ CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
rJMSF013D11+ CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
rJMSF016M10+ CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
rJMFF045F18+ CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
rJMSF011P16+ CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
rJMSF014C12+ CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
rJMSF020O16+ CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
rJMSF052L19+ CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
rJMSF043I08+ CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
rJMSF025A07+ CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
rJMSF016N10+ CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
rJMSF042C17+ CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
____________________________________________________________
consensus CAAAGTGATTTTCTTCAACGCACTTTCTTCTGCAAGGAAAGATCCAATCCTGATGCTGAG
. : . : . : . : . : . :
rJMFF016A16+ ATCCTTCTTCTCCCTGTGCGTGATCTTTGTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
rJMSF042H12+ ATCCTTCTTCTCCCTGTGCGTGATCTTTGTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
rJMSF007P09+ ATCCTTCTTCTCCCTGTGCGTGATCTTTGTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
rJMSF013D11+ ATCCTTCTTCTCCCTGTGCGTGATCTTTGTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
rJMSF016M10+ ATCCTTCTTCTCCCTGTGCGTGATCTTTGTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
rJMFF045F18+ ATCCTTCTTCTCCCTGTGCGTGATCTTTGTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
rJMSF011P16+ ATCCTTCTTCTCCCTGTGCGTGATCTTTGTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
rJMSF014C12+ ATCCTTCTTCTCCCTGTGCGTGATC--TCTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
rJMSF020O16+ ATCCTTCTTCTCCCTGTGCGTGATCTTTGTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
rJMSF052L19+ ATCCTTCTTCTCCCTGTGCGTGATCTTTGTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
rJMSF043I08+ ATCCTTCTTCTCCCTGTGCGTGATCTTTGTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
rJMSF025A07+ ATCCTTCTTCTCCCTGTGCGTGATCTTTGTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
rJMSF016N10+ ATCCTTCTTCTCCCTGTGCGTGATCTTTGTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
rJMSF042C17+ ATCCTTCTTCTCCCTGTGCGTGATCTTTGTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
____________________________________________________________
consensus ATCCTTCTTCTCCCTGTGCGTGATCTTTGTCAAAGCTTCAGCTTTGGCTTGTCATCGCGT
. : . : . : . : . : . :
rJMFF016A16+ CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTATATCTTTTGCTCCAAGGAAATTCGC
rJMSF042H12+ CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTCTATCTTTTGCTCCAAGGAAATTCGC
rJMSF007P09+ CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTCTATCTTTTGCTCCAAGGAAATTCGC
rJMSF013D11+ CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTCTATCTTTTGCTCCAAGGAAATTCGC
rJMSF016M10+ CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTCTATCTTTTGCTCCAAGGAAATTCGC
rJMFF045F18+ CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTATATCTTTTGCTCCAAGGAAATTCGC
rJMSF011P16+ CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTCTATCTTTTGCTCCAAGGAAATTCGC
rJMSF014C12+ CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTCTATCTTTTGCTCCAAGGAAATTCGC
rJMSF020O16+ CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTCTATCTTTTGCTCCAAGGAAATTCGC
rJMSF052L19+ CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTCTATCTTTTGCTCCAAGGAAATTCGC
rJMSF043I08+ CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTCTATCTTTTGCTCCAAGGAAATTCGC
rJMSF025A07+ CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTCTATCTTTTGCTCCAAGGAAATTCGC
rJMSF016N10+ CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTCTATCTTTTGCTCCAAGGAAATTCGC
rJMSF042C17+ CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTCTATCTTTTGCTCCAAGGAAATTCGC
____________________________________________________________
consensus CCTTGTTTCTTTCTCCGAAACTTACTTGGATCGTCTATCTTTTGCTCCAAGGAAATTCGC
. : . : . : . : . : . :
rJMFF016A16+ AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
rJMSF042H12+ AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
rJMSF007P09+ AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
rJMSF013D11+ AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
rJMSF016M10+ AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
rJMFF045F18+ AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
rJMSF011P16+ AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
rJMSF014C12+ AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
rJMSF020O16+ AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
rJMSF052L19+ AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
rJMSF043I08+ AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
rJMSF025A07+ AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
rJMSF016N10+ AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
rJMSF042C17+ AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
____________________________________________________________
consensus AATGGGTGCCAATTCATAGGAATGCTTGCACTTGACTAGAGGCAGCCATGGTTTTCTATC
. : . : . : . : . : . :
rJMFF016A16+ TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
rJMSF042H12+ TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
rJMSF007P09+ TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
rJMSF013D11+ TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
rJMSF016M10+ TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
rJMFF045F18+ TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
rJMSF011P16+ TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
rJMSF014C12+ TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
rJMSF020O16+ TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
rJMSF052L19+ TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
rJMSF043I08+ TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
rJMSF025A07+ TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
rJMSF016N10+ TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
rJMSF042C17+ TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
____________________________________________________________
consensus TACATAGTACGTGTTGATGTTCTCTTTCGGCTTCAATAAATTACTACAAAACATACAAAG
. : . : . : . : . : . :
rJMFF016A16+ TGTTGTATA
rJMSF042H12+ TGTTGTATATAAACGCT
rJMSF007P09+ TGTTGTATATAAACGCTATCTTTTTTCACCAGTTCTGTATATTAGTGCATTTATATTTCT
rJMSF013D11+ TGTTGTATATAAACGCTATCTTTTTTCACCAGTTCTGTATATTAGTGCATTTATATTTCT
rJMSF016M10+ TGNTGTATATAAACGCTNTCTTTTTTCACCAGTTCTGTATATTAGTGCATTTATATTTCT
rJMFF045F18+ TGTTGTATATAAACGCTATCTTTTTTC
rJMSF011P16+ TGTTGTATATAAACGCTATCTTTTTTCACCAGTTCTGTATATTAGTGCATTTATATTTCT
rJMSF014C12+ TGTTGTATATAAACGCTATCTTTTTTCACCAGTTCTGTATATTAGTGCATTTATATTTCT
rJMSF020O16+ TGTTGTATATAAACGCTATCTTTTTTCACCAGTTCTGTATATTAGTGCATTTATATTTCT
rJMSF052L19+ TGTTGTATATAAACGCTATCTTTTTTCACCAGTTCTGTATATTAGTGCATTTATATTTCT
rJMSF043I08+ TGTTGTATATAAACGCTATCTTTTTTCACCAGTTCTGTATATTAGTGCATTTATATTTCT
rJMSF025A07+ TGTTGTATATAAACGCTATCTTTTTTCACCAGTTCTGTATATTAGTGCATTTATATTTCT
rJMSF016N10+ TGTTGTATATAAACGCTATCTTTTTTCACCAGTTCTGTATATTAGTGCATTTATATTTCT
rJMSF042C17+ TGTTGTATATAAACGCTATCTTTTTTCACCAGTTCTGTATATTAGTGCATTTATATTTCT
____________________________________________________________
consensus TGTTGTATATAAACGCTATCTTTTTTCACCAGTTCTGTATATTAGTGCATTTATATTTCT
. : . : . : . : . : . :
rJMSF007P09+ AATTATAGCAACTAAAATTAGGTAGGTATCAGATACCATTAGAGGTAGAT
rJMSF013D11+ AATTATAGCAACTAAAATTAGGTAGGTATCAGATACCATTAGAGGTAGATGTATTCGG
rJMSF016M10+ AATTATAGCAACTAAAATTAGGTAGGTATCAGATACCATTAGAGGTAGATGTATTCGGTG
rJMSF011P16+ AATTATAGCAACTAAAATTAGGTAGGTATCAGATACCATTAGAGGTAGATGTATTCGGTG
rJMSF014C12+ AATTATAGCAACTAAAATTAGGTAGGTATCAGATACCATTAGAGGTAGATGTATTCGGTG
rJMSF020O16+ AATTATAGCAACTAAAATTAGGTAGGTATCAGATACCATTAGAGGTAGATGTATTCGGTG
rJMSF052L19+ AATTATAGCAACTAAAATTAGGTAGGTATCAGATACCATTAGAGGTAGATGTATTCGGTG
rJMSF043I08+ AATTATAGCAACTAAAATTAGGTAGGTATCAGATACCATTAGAGGTAGATGTATTCGGTG
rJMSF025A07+ AATTATAGCAACTAAAATTAGGTAGGTATCAGATACCATTAGAGGTAGATGTATTCGGTG
rJMSF016N10+ AATTATAGCAACTAAAATTAGGTAGGTATCAGATACCATTAGAGGTAGATGTATTCGGTG
rJMSF042C17+ AATTATAGCAACTAAAATTAGGTAGGTATCAGATACCATTAGAGGTAGATGTATTCGGTG
____________________________________________________________
consensus AATTATAGCAACTAAAATTAGGTAGGTATCAGATACCATTAGAGGTAGATGTATTCGGTG
. : . : . : . : . : . :
rJMSF016M10+ ANTAGTGCATTGTATTAATT
rJMSF011P16+ ATTAGTGCATTGTATTAATTATT
rJMSF014C12+ ATTAGTGCATTGTATTAATTATT
rJMSF020O16+ ATTAGTGCAT
rJMSF052L19+ ATTAGTGCATTGTATTAATTATTTAAATT
rJMSF043I08+ ATTAGTGCATTGTATTAATTATTTAAATTTGATTGATTGATTGTATTAGCTAATTGAT
rJMSF025A07+ ATTAGTGCATTGTATTAATTATTTAAATT
rJMSF016N10+ ATTAGTGCATTGTATTAATTATTTAAATTTGAT
rJMSF042C17+ ATTAGTGCATTGTATTAATTATTTAAATTTGATTGATTGATTGTATTAGCTAATTGATCA
____________________________________________________________
consensus ATTAGTGCATTGTATTAATTATTTAAATTTGATTGATTGATTGTATTAGCTAATTGATCA