| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF048F14 | Sequence | 211 | 005779 (10) | ref|XP_006343823.1| | 5e-20 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A-like [Solan | 351 | 005779 (10) | ref|XP_010545114.1| | 2e-18 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A isoform X2 |
| JMFN019H22 | Sequence | 609 | 005779 (10) | ref|XP_011074567.1| | 8e-107 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A [Sesamum in | |||||
| JMSF019B06 | Sequence | 327 | 000846 (14) | ref|XP_009798338.1| | 2e-07 | PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris] | 780 | 005779 (10) | ref|XP_011074567.1| | 2e-118 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A [Sesamum in |
| JMSF023G18 | Sequence | 625 | 005779 (10) | ref|XP_011074567.1| | 2e-106 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A [Sesamum in | 755 | 005779 (10) | emb|CDP12187.1| | 3e-80 | unnamed protein product [Coffea canephora] |
| JMSF040A03 | Sequence | 677 | 005779 (10) | ref|XP_011074567.1| | 1e-118 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A [Sesamum in | 844 | 005779 (10) | emb|CDP12187.1| | 6e-95 | unnamed protein product [Coffea canephora] |
| JMSF046K08 | Sequence | 712 | 005779 (10) | ref|XP_011074567.1| | 3e-127 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A [Sesamum in | 698 | 005779 (10) | emb|CDP12187.1| | 3e-74 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF023G18- GTAGCATTTGCCGTTGGGGACGAA
JMSF040A03- GAAAGAAGAGTAGCATTTGCCGTTGGGGACGAA
JMFN019H22- CCGTTGGGGACGAA
JMSF046K08- GAAAGAAGAGTAGCATTTGCCGTTGGGGACGAA
____________________________________________________________
consensus GAAAGAAGAGTAGCATTTGCCGTTGGGGACGAA
. : . : . : . : . : . :
JMSF023G18- GACGAAGGGTGAACTAAGCTGAGAAAACCGATCAGAAAGCTAGAGAGAGATGGATCCAAA
JMFF048F14- GATCAGAAAGCTAGAGAGAGATGGATCCAAA
JMSF040A03- GACGAAGGGTGAACTAAGCTGAGAAAACCGATCAGAAAGCTAGAGAGAGATGGATCCAAA
JMFN019H22- GACGAAGGGTGAACTAAGCTGAGAAAACCGATCAGAAAGCTAGAGAGAGATGGATCCAAA
JMSF046K08- GACGAAGGGTGAACTAAGCTGAGAAAACCGATCAGAAAGCTAGAGAGAGATGGATCCAAA
____________________________________________________________
consensus GACGAAGGGTGAACTAAGCTGAGAAAACCGATCAGAAAGCTAGAGAGAGATGGATCCAAA
. : . : . : . : . : . :
JMSF023G18- GCTCACGGAGGTTTCTCAATCGTTTGAGCGGTTCAAAGCCGCTCTTACGCGCAACGATTT
JMFF048F14- GCTCACGGAGGTTTCTCAATCGTTCGAGCGGTTCAAAGCCGCTTTTACGAGCAACGATTT
JMSF040A03- GCTCACGGAGGTTTCTCAATCGTTTGAGCGGTTCAAAGCCGCTCTTACGCGCAACGATTT
JMFN019H22- GCTCACGGAGGTTTCTCAATCGTTTGAGCGGTTCAAAGCCGCTCTTACGCGCAACGATTT
JMSF046K08- GCTCACGGAGGTTTCTCAATCGTTTGAGCGGTTCAAAGCCGCTCTTACGCGCAACGATTT
____________________________________________________________
consensus GCTCACGGAGGTTTCTCAATCGTTTGAGCGGTTCAAAGCCGCTCTTACGCGCAACGATTT
. : . : . : . : . : . :
JMSF023G18- CGATACCTGCACCAGACTTCTCTCCCAGCTCAAGGTTATGCTAACTGAGTTTAAGAGTCT
JMFF048F14- CGATACCTGCACCAGACTTCTCTCCCAGCTCAAGGTTATGCTAACTGAGTTTAAGAGTCT
JMSF040A03- CGATACCTGCACCAGACTTCTCTCCCAGCTCAAGGTTATGCTAACTGAGTTTAAGAGTCT
JMFN019H22- CGATACCTGCACCAGACTTCTCTCCCAGCTCAAGGTTATGCTAACTGAGTTTAAGAGTCT
JMSF046K08- CGATACCTGCACCAGACTTCTCTCCCAGCTCAAGGTTATGCTAACTGAGTTTAAGAGTCT
____________________________________________________________
consensus CGATACCTGCACCAGACTTCTCTCCCAGCTCAAGGTTATGCTAACTGAGTTTAAGAGTCT
. : . : . : . : . : . :
JMSF023G18- CCCTCCCCTTTTCGGAGAAATACCAAATGCAGTTCATGAGCTGACAATTGCAAGGGATAT
JMFF048F14- CCCTCCCCTTTTTGGAGAAA
JMSF040A03- CCCTCCCCTTTTCGGAGAAATACCAAATGCAGTTCATGAGCTGACAATTGCAAGGGATAT
JMFN019H22- CCCTCCCCTTTTCGGAGAAATACCAAATGCAGTTCATGAGCTGACAATTGCAAGGGATAT
JMSF046K08- CCCTCCCCTTTTCGGAGAAATACCAAATGCAGTTCATGAGCTGACAATTGCAAGGGATAT
rJMSF019B06+ GGAGAAACACCAAATGCAGTTCCAGAGCTGACAATTGCAAGGGATAT
____________________________________________________________
consensus CCCTCCCCTTTTCGGAGAAATACCAAATGCAGTTCATGAGCTGACAATTGCAAGGGATAT
. : . : . : . : . : . :
JMSF023G18- ATATGAGCATGCAGTTGTTTTAGCTGTGAAGATGGAGGATCAAGATGCCTTTGAGAGAGA
JMSF040A03- ATATGAGCATGCAGTTGTTTTAGCTGTGAAGATGGAGGATCAAGATGCCTTTGAGAGAGA
JMFN019H22- ATATGAGCATGCAGTTGTTTTAGCTGTGAAGATGGAGGATCAAGATGCCTTTGAGAGAGA
JMSF046K08- ATATGAGCATGCAGTTGTTTTAGCTGTGAAGATGGAGGATCAAGATGCCTTTGAGAGAGA
rJMSF019B06+ ATATGAGCATGCAGTTGTTTTAGCTGTGAAGATGGAGGATCAGGATGCCTTTGAGAGAGA
____________________________________________________________
consensus ATATGAGCATGCAGTTGTTTTAGCTGTGAAGATGGAGGATCAAGATGCCTTTGAGAGAGA
. : . : . : . : . : . :
JMSF023G18- TTTCTTTCAGCTGAAACCTTATTACACAGATGCACGCAACCGTCTTCCACCATCCCCACA
JMSF040A03- TTTCTTTCAGCTGAAACCTTATTACACAGATGCACGCAACCGTCTTCCACCATCCCCACA
JMFN019H22- TTTCTTTCAGCTGAAACCTTATTACACAGATGCACGCAACCGTCTTCCACCATCCCCACA
JMSF046K08- TTTCTTTCAGCTGAAACCTTATTACACAGATGCACGCAACCGTCTTCCACCATCCCCACA
rJMSF019B06+ TTTCTTTCAGCTGAAACCTTATTACACAGATGCACGCAACCGTCTTCCACCATCCCCACA
rJMSF040A03+ CCCACA
____________________________________________________________
consensus TTTCTTTCAGCTGAAACCTTATTACACAGATGCACGCAACCGTCTTCCACCATCCCCACA
. : . : . : . : . : . :
JMSF023G18- GGAATACCCAATTTTAGGTCTCAATCTTCTGAGACTACTTGTGCAGAATAGAATTGCTGA
JMSF040A03- GGAATACCCAATTTTAGGTCTCAATCTTCTGAGACTACTTGTGCAGAATAGAATTGCTGA
JMFN019H22- GGAATACCCAATTTTAGGTCTCAATCTTCTGAGACTACTTGTGCAGAATAGAATTGCTGA
JMSF046K08- GGAATACCCAATTTTAGGTCTCAATCTTCTGAGACTACTTGTGCAGAATAGAATTGCTGA
rJMSF019B06+ GGAATACCCAATTTTAGGTCTCAATCTTCTGAGACTACTTGTGCAGAATAGAATTGCTGA
rJMSF040A03+ GGAATACCCAATTTTAGGTCTCAATCTTCTGAGACTACTTGTGCAGAATAGAATTGCTGA
____________________________________________________________
consensus GGAATACCCAATTTTAGGTCTCAATCTTCTGAGACTACTTGTGCAGAATAGAATTGCTGA
. : . : . : . : . : . :
JMSF023G18- ATTTCACACCGAATTGGAGTTGCTTTCTCCAAATGCCTTGGAGAATCCTTGTATTAAGCA
JMSF040A03- ATTTCACACCGAATTGGAGTTGCTTTCTCCAAATGCCTTGGAGAATCCTTGTATTAAGCA
JMFN019H22- ATTTCACACCGAATTGGAGTTGCTTTCTCCAAATGCCTTGGAGAATCCTTGTATTAAGCA
JMSF046K08- ATTTCACACCGAATTGGAGTTGCTTTCTCCAAATGCCTTGGAGAATCCTTGTATTAAGCA
rJMSF019B06+ ATTTCACACCGAATTGGAGTTGCTTTCTCCAAATGCCTTGGAGAATCCTTGTATTAAGCA
rJMSF023G18+ TTTCTCCAAATGCCTTGGAGAATCCTTGTATTAAGCA
rJMSF046K08+ TTGTATTAAGCA
rJMSF040A03+ ATTTCACACCGAATTGGAGTTGCTTTCTCCAAATGCCTTGGAGAATCCTTGTATTAAGCA
____________________________________________________________
consensus ATTTCACACCGAATTGGAGTTGCTTTCTCCAAATGCCTTGGAGAATCCTTGTATTAAGCA
. : . : . : . : . : . :
JMSF023G18- TGCTGTTGAGCTGGAGCAATCATTTATGGAAGGAGCTTACAACCGTGTCTTAAGTGCCAG
JMSF040A03- TGCTGTTGAGCTGGAGCAATCATTTATGGAAGGAGCTTACAACCGTGTCTTAAGTGCCAG
JMFN019H22- TGCTGTTGAGCTGGAGCAATCATTTATGGAAGGAGCTTACAACCGTGTCTTAAGTGCCAG
JMSF046K08- TGCTGTTGAGCTGGAGCAATCATTTATGGAAGGAGCTTACAACCGTGTCTTAAGTGCCAG
rJMSF019B06+ TGCTGTCGAACTGGAGCAATCATTTATGGAAGGAGCTTACAACCGTGTCTTAAGTGCCAG
rJMSF023G18+ TGCTGTTGAGCTGGAGCAATCATTTATGGAAGGAGCTTACAACCGTGTCTTAAGTGCCAG
rJMSF046K08+ TGCTGNTGAGCTGGAGCAATCATTTATGGAAGGAGCTTACAACCGTGTCTTAAGTGCCAG
rJMSF040A03+ TGCTGTTGAGCTGGAGCAATCATTTATGGAAGGAGCTTACAACCGTGTCTTAAGTGCCAG
____________________________________________________________
consensus TGCTGTTGAGCTGGAGCAATCATTTATGGAAGGAGCTTACAACCGTGTCTTAAGTGCCAG
. : . : . : . : . : . :
JMSF023G18- ACAGGCAGTGCCCCATGAAACCTATGCTTATTTCATGGATCTTCTCGCCNAGACTGTGAG
JMSF040A03- ACAGGCAGTGCCCCATGAAACCTATGCTTATTTCATGGATCTTCTCGCCNAGACTGTGAG
JMFN019H22- ACAGGCAGTGCCCCATGAAACCTATGCTTATTTCATGGATCTTCTCGCCAAGACT
JMSF046K08- ACAGGCAGTGCCCCATGAAACCTATGCTTATTTCATGGATCTTCTCGCCAAGACTGTGAG
rJMSF019B06+ ACAGGCAGTGCCCCATGAAGCCTATGCTTATTTCATGGATCTTCTGGCCAAGACGGTGAG
rJMSF023G18+ ACAGGCAGTGCCCCATGAAACCTATGCTTATTTCATGGATCTTCTCGCCAAGACTGTGAG
rJMSF046K08+ ACAGGCAGTGCCCCATGAAACCTATGCTTATTTCATGGATCTTCTCGCCAAGACTGTGAG
rJMSF040A03+ ACAGGCAGTGCCCCATGAAACCTATGCTTATTTCATGGATCTTCTCGCCAAGACTGTGAG
____________________________________________________________
consensus ACAGGCAGTGCCCCATGAAACCTATGCTTATTTCATGGATCTTCTCGCCAAGACTGTGAG
. : . : . : . : . : . :
JMSF040A03- GGATGAGATAGCTGGCTGCAGTGAAAAGGCTTACGATTCTCTTT
JMSF046K08- GGATGAGATAGCTGGCTGCAGTGAAAAGGCTTACGATTCTCTTTCAATAGGTGATGCCCG
rJMSF019B06+ GGATGAGATAGCTGGTTGTAGTGAAAAGGCTTACGATTCTCTTTCAATAAGTGATGCCCG
rJMSF023G18+ GGATGAGATAGCTGGCTGCAGTGAAAAGGCTTACGATTCTCTTTCAATAGGTGATGCCCG
rJMSF046K08+ GGATGAGATAGCTGGCTGCAGTGAAAAGGCTTACGATTCTCTTTCAATAGGTGATGCCCG
rJMFF048F14+ GATGCCCG
rJMSF040A03+ GGATGAGATAGCTGGCTGCAGTGAAAAGGCTTACGATTCTCTTTCAATAGGTGATGCCCG
____________________________________________________________
consensus GGATGAGATAGCTGGCTGCAGTGAAAAGGCTTACGATTCTCTTTCAATAGGTGATGCCCG
. : . : . : . : . : . :
JMSF046K08- GCAAATGTTACTTTTCTCC
rJMSF019B06+ GCAAATGTTACTTTTCTCCTCGGACAAAGAACTCCTTGAATATGTTGAGGAGGAACACCC
rJMSF023G18+ GCAAATGTTACTTTTCTCCTCAGACAAAGAACTCCTTGGATATGTCGAGGAGGAACACCC
rJMSF046K08+ GCAAATGTTACTTTTCTCCTCAGACAAAGAACTCCTTGGATATGTCGAGGAGGAACACCC
rJMFF048F14+ GCAAATGTTACTTTTCTCCTCGGACAAAGAACTCCTTGAATATGTTGAGGAGGAACACCC
rJMSF040A03+ GCAAATGTTACTTTTCTCCTCAGACAAAGAACTCCTTGGATATGTCGAGGAGGAACACCC
____________________________________________________________
consensus GCAAATGTTACTTTTCTCCTCAGACAAAGAACTCCTTGGATATGTCGAGGAGGAACACCC
. : . : . : . : . : . :
rJMSF019B06+ CGAGTGGGAGATAAAAGGCAGACTTGTTATCTTCCAGAAAGTAAAAGATTCCGCACCTTG
rJMSF023G18+ CGAGTGGGAGATAAAAGACGGACTTGTTATCTTCCAGAAAGTAAAAGATTCCGCTCCTTG
rJMSF046K08+ CGAGTGGGAGATAAAAGACGGACTTGTTATCTTCCAGAAAGTAAAAGATTCCGCTCCTTG
rJMFF048F14+ CGAGTGGGAGATAAAAGGCAGACTTGTTATCTTCCAGAAAGTAAAAGATTCCGCACCTTG
rJMSF040A03+ CGAGTGGGAGATAAAAGACGGACTTGTTATCTTCCAGAAAGTAAAAGATTCCGCTCCTTG
____________________________________________________________
consensus CGAGTGGGAGATAAAAGACGGACTTGTTATCTTCCAGAAAGTAAAAGATTCCGCTCCTTG
. : . : . : . : . : . :
rJMSF019B06+ CAAAGAGATACCATCTCTGCAACTTATCAACCAAACACTGAGTTATGCCAGGGAGTTGGA
rJMSF023G18+ CAAAGAGATACCATCTCTGCAACTTATTAACCAAACACTGAGTTATGCCAGGGAGTTGGA
rJMSF046K08+ CAAAGAGATACCATCTCTGCAACTTATTAACCAAACACTGAGTTATGCCAGGGAGTTGGA
rJMFF048F14+ CAAAGAGATACCATCTCTGCAACTTATCAACCAAACACTGAGTTATGCCAGTGAGTTGGA
rJMSF040A03+ CAAAGAGATACCATCTCTGCAACTTATTAACCAAACACTGAGTTATGCCAGGGAGTTGGA
____________________________________________________________
consensus CAAAGAGATACCATCTCTGCAACTTATTAACCAAACACTGAGTTATGCCAGGGAGTTGGA
. : . : . : . : . : . :
rJMSF019B06+ GCGTATTATCTGAGGATAGACTGCCCACCTTTATTTCTACTCTCAATTACG-TATGACAC
rJMSF023G18+ GCGTATTATCTGAGGATAGACTGCTCACCTTTATTTCTACTCTCGATTACGTTATGACAA
rJMSF046K08+ GCGTATTATCTGAGGATAGACTGCTCACCTTTATTTCTACTCTCGATTACGTTATGACAA
rJMFF048F14+ GCGTATTATCTGAGGATAGACTGCCCACCTTTATTTCTACTCTCAATTACG-TATGACAC
rJMSF040A03+ GCGTATTATCTGAGGATAGACTGCTCACCTTTATTTCTACTCTCGATTACGTTATGACAA
____________________________________________________________
consensus GCGTATTATCTGAGGATAGACTGCTCACCTTTATTTCTACTCTCGATTACGTTATGACAA
. : . : . : . : . : . :
rJMSF019B06+ GGGGAATACCCCTGGGACCAGTTGTGCACATCTATTGTGTTTTTT
rJMSF023G18+ GGGGAATGCCCCCGGGACCAGTTGTGCACATTTATTGTG--TTTTTTGGGGGGTTTAAAT
rJMSF046K08+ GGGGAATGCCCCCGGGACCAGTTGTGCACATTTATTGTG--TTTTTTGGGGGGTTTAAAT
rJMFF048F14+ GGGGAATACCCCTGGGACCAGTTGTGCACATCTATTGTGTTTTTTTTGGGGGGTTTAAAT
rJMSF040A03+ GGGGAATGCCCCCGGGACCAGTTGTGCACATTTATTGTG--TTTTTTGGGGGGTTTAAAT
____________________________________________________________
consensus GGGGAATGCCCCCGGGACCAGTTGTGCACATTTATTGTG--TTTTTTGGGGGGTTTAAAT
. : . : . : . : . : . :
rJMSF023G18+ TGAAAATGGACACTTTTGTTCAAAGTGAATAGCTTGTTTGATGGAATTCTCTTTGCATAA
rJMSF046K08+ TGAAAATGGACACTTTTGTTCAAAGTGAATAGCTTGTTTGATGGAATTCTCTTTGCATAA
rJMFF048F14+ TGAAAATGGACACTTTTGTTCAAAGTGAATAGTTTGTTTGATGG
rJMSF040A03+ TGAAAATGGACACTTTTGTTCAAAGTGAATAGCTTGTTTGATGGAATTCTCTTTGCATAA
____________________________________________________________
consensus TGAAAATGGACACTTTTGTTCAAAGTGAATAGCTTGTTTGATGGAATTCTCTTTGCATAA
. : . : . : . : . : . :
rJMSF023G18+ TTCTGTCTTTCCCATTCCCTTGCCCTTCAAGCTATAAATCATTTGTCTTGAGATGTTTGT
rJMSF046K08+ TTCTGTCTTTCCCATTCCCTTGCCCTTCAAGCTATAAATCATTTGTCTTGAGATGTTTGT
rJMSF040A03+ TTCTGTCTTTCCCATTCCCTTGCCCTTCAAGCTATAAATCATTTGTCTTGAGATGTTTGT
____________________________________________________________
consensus TTCTGTCTTTCCCATTCCCTTGCCCTTCAAGCTATAAATCATTTGTCTTGAGATGTTTGT
. : . : . : . : . : . :
rJMSF023G18+ AATGGTGAAGCCTTCTGCATTGTCTGCTTCTTCCCCATCTCATAACACCCTGATTTGATG
rJMSF046K08+ AATGGTGAAGCCTTCTGCATTGTCTGCTTCTTCCCCATCTCATAACACCCTGATTTGATG
rJMSF040A03+ AATGGTGAAGCCTTCTGCATTGTCTGCTTCTTCCCCATCTCATAACACCCTGATTTGATG
____________________________________________________________
consensus AATGGTGAAGCCTTCTGCATTGTCTGCTTCTTCCCCATCTCATAACACCCTGATTTGATG
. : . : . : . : . : . :
rJMSF023G18+ ATATTTCAGCTTTTATTTTCTTATGTATTGTGGAGTGAAGACAGGGTGAATACAAAAATA
rJMSF046K08+ ATATTTCAGCTTTTATTTTCTTATGTAT
rJMSF040A03+ ATATTTCAGCTTTTATTTTCTTATGTATTGTGGAGTGAAGACAGGGTGAATACAAAAATA
____________________________________________________________
consensus ATATTTCAGCTTTTATTTTCTTATGTATTGTGGAGTGAAGACAGGGTGAATACAAAAATA