Contig 005757:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF046P09+                                                         GTCAAAAGAAGCT
                      ____________________________________________________________
consensus                                                            GTCAAAAGAAGCT
 
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rJMSF046P09+          TGTCTATCTCCGTAACACAAGAGCTGGACCAAGTGCTCCTCCACAGAATCAAGCGAAAAA
                      ____________________________________________________________
consensus             TGTCTATCTCCGTAACACAAGAGCTGGACCAAGTGCTCCTCCACAGAATCAAGCGAAAAA
 
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rJMSF046P09+          AGATAAAAAAGGAAAAGGTGTTCAGGAAGATAACACTAAGGCCACAATAGGAGCTGGATC
                      ____________________________________________________________
consensus             AGATAAAAAAGGAAAAGGTGTTCAGGAAGATAACACTAAGGCCACAATAGGAGCTGGATC
 
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rJMSF046P09+          CTCAGATGAGTTCTCAGATGATGAACAAATAATTGTTGAAGAACATAGGGGAAGACCGGA
                      ____________________________________________________________
consensus             CTCAGATGAGTTCTCAGATGATGAACAAATAATTGTTGAAGAACATAGGGGAAGACCGGA
 
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rJMSF046P09+          GAAATCTAATTTAGAAATGGTGACACTACCAGAAATTACTAACAAGAGCCTTGAGAAGTT
rJMSF036P22+               CTAATTTAGAAATGGTGACACTACCAGAAATTACTAACAAGAGCCTTGAGAAGTT
                      ____________________________________________________________
consensus             GAAATCTAATTTAGAAATGGTGACACTACCAGAAATTACTAACAAGAGCCTTGAGAAGTT
 
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rJMSF046P09+          CAAGTATGAGCTCCAAGAGATTTTAGTGAGCTATTCATGTCGAATTTTCCTTGGCTGTTT
rJMSF036P22+          CAAGTATGAGCTCCAAGAGATTTTAGTGAGCTATTCATGTCGAATTTTCCTTGGCTGTTT
                      ____________________________________________________________
consensus             CAAGTATGAGCTCCAAGAGATTTTAGTGAGCTATTCATGTCGAATTTTCCTTGGCTGTTT
 
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rJMSF046P09+          TGAGGCAATATATCAGCAGCGGTACAAGAGACCACTGGATTACAAGAGCTTGGGTGTGAA
rJMSF036P22+          TGAGGCAATATATCAGCAGCGGTACAAGAGACCACTGGATTACAAGAGCTTGGGTGTGAA
                      ____________________________________________________________
consensus             TGAGGCAATATATCAGCAGCGGTACAAGAGACCACTGGATTACAAGAGCTTGGGTGTGAA
 
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rJMSF046P09+          TGAACTGGAAGAACTGCTAGATAAGGTAAAAGATGTGGTGGTTGTACGTGAGGAACCTGC
rJMSF036P22+          TGAACTGGAAGAACTGCTAGATAAGGTAAAAGATGTGGTGGTTGTACGTGAGGAACCTGC
                      ____________________________________________________________
consensus             TGAACTGGAAGAACTGCTAGATAAGGTAAAAGATGTGGTGGTTGTACGTGAGGAACCTGC
 
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rJMSF046P09+          TAGCAAAAGAAAGTTTTTGACTGCTGTTGGTGGCTAGAAAGAGTTGACAATTTCTGTTGA
rJMSF036P22+          TAGCAAAAGAAAGTTTTTGACTGCTGTTGGTGGCTAGAAAGAGTTGACAATTTCTGTTGA
                      ____________________________________________________________
consensus             TAGCAAAAGAAAGTTTTTGACTGCTGTTGGTGGCTAGAAAGAGTTGACAATTTCTGTTGA
 
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rJMSF046P09+          TAGTGTCTCTACTTCCTTTAGAGTCTGTACCTGAG                         
rJMSF036P22+          TAGTGTCTCTACTTCCTTTAGAGTCTGTACCTGAGTTTGTTGAATCAAATGAAGCGCTAT
                      ____________________________________________________________
consensus             TAGTGTCTCTACTTCCTTTAGAGTCTGTACCTGAGTTTGTTGAATCAAATGAAGCGCTAT
 
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rJMSF036P22+          CTCTAGATAAGAGGTTCGTCCATCTCTTGAAAAGGATACCTTACTATTGGAGTGTCCCCT
                      ____________________________________________________________
consensus             CTCTAGATAAGAGGTTCGTCCATCTCTTGAAAAGGATACCTTACTATTGGAGTGTCCCCT
 
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rJMSF036P22+          ACGAGTACAGGCGTTCTTTTGGACGCTGTTTTGGTGTTTTCCATTGCCAAACCTCATTGA
                      ____________________________________________________________
consensus             ACGAGTACAGGCGTTCTTTTGGACGCTGTTTTGGTGTTTTCCATTGCCAAACCTCATTGA
 
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rJMSF036P22+          AGAATGGAAATGGTACTGTAGATGTCCCTTTCGTCGTATTGATTGCAAATGCTGTTGCCA
                      ____________________________________________________________
consensus             AGAATGGAAATGGTACTGTAGATGTCCCTTTCGTCGTATTGATTGCAAATGCTGTTGCCA
 
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rJMSF036P22+          GACTTTTAAACAACCAACAGATGTGCAGTTATTTTAGGTTTTGTGTTTAGAGTCTTTAGC
                      ____________________________________________________________
consensus             GACTTTTAAACAACCAACAGATGTGCAGTTATTTTAGGTTTTGTGTTTAGAGTCTTTAGC
 
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rJMSF036P22+          TTAAACAGAGATTTGGGGTGCCCCCTTGAGATTAGTGCTTCACTGCAACTCACAAAATTT
                      ____________________________________________________________
consensus             TTAAACAGAGATTTGGGGTGCCCCCTTGAGATTAGTGCTTCACTGCAACTCACAAAATTT
 
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rJMSF036P22+          GTGTATTCTGGGAAGAGAATATTCCCTTGTCCCATGTTGGCACCTGATGTATTCTGTATC
                      ____________________________________________________________
consensus             GTGTATTCTGGGAAGAGAATATTCCCTTGTCCCATGTTGGCACCTGATGTATTCTGTATC