Contig 005751:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF003C19+                                                       TGGAGTATGAGGCGG
                      ____________________________________________________________
consensus                                                          TGGAGTATGAGGCGG
 
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rJMSF003C19+          AGCAAGGCGAACTTTTTCAGACTCATGTCGGTCTTCAATGGGTTGTTTTCTGCAGCGAAA
                      ____________________________________________________________
consensus             AGCAAGGCGAACTTTTTCAGACTCATGTCGGTCTTCAATGGGTTGTTTTCTGCAGCGAAA
 
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rJMSF003C19+          TGGTTCGGGGATGTGTGCATTTGGAAGAACCCCGTGACAACGGGACTGGTTCACATTCTC
                      ____________________________________________________________
consensus             TGGTTCGGGGATGTGTGCATTTGGAAGAACCCCGTGACAACGGGACTGGTTCACATTCTC
 
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rJMSF003C19+          TTCACTTTGCTCGTTTGTTTCCCGGAACTCATTCTCCCAACTGGATTTCTCTACATGTTC
                      ____________________________________________________________
consensus             TTCACTTTGCTCGTTTGTTTCCCGGAACTCATTCTCCCAACTGGATTTCTCTACATGTTC
 
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rJMSF003C19+          CTAGTAGGCCTTTGGAATTACCGGTACCGAGCTCAGTACCCTCCTCACATGAACACGAGA
rJMSF036A22+                               CGGTACCGAGCTCAGTACCCTCCTCACATGAACACGAGA
                      ____________________________________________________________
consensus             CTAGTAGGCCTTTGGAATTACCGGTACCGAGCTCAGTACCCTCCTCACATGAACACGAGA
 
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rJMSF003C19+          ATATCCTTTGCTGATTCAGCACAACCCGACGAGCTCGACGAGGAATTCGACACGTTTCCC
rJMSF036A22+          ATATCCTTTGCTGATTCAGCACAACCCGACGAGCTCGACGAGGAATTCGACACGTTTCCC
                      ____________________________________________________________
consensus             ATATCCTTTGCTGATTCAGCACAACCCGACGAGCTCGACGAGGAATTCGACACGTTTCCC
 
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rJMSF003C19+          ACGTCGAGGAGCCCGGACCTGGTAAGAGTGCGGTACGATCGCCTGCGAAGTGTGGCTGGT
rJMSF036A22+          ACGTCGAGGAGCCCGGACCTGGTAAGAGTGCGGTACGATCGCCTGCGAAGTGTGGCTGGT
                      ____________________________________________________________
consensus             ACGTCGAGGAGCCCGGACCTGGTAAGAGTGCGGTACGATCGCCTGCGAAGTGTGGCTGGT
 
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rJMSF003C19+          CGGATTCAGACAGCGGTGGGTGATGTAGCGACGCAAGGAGAGCGGGTTCAGGCGCTCCTG
rJMSF036A22+          CGGATTCAGACAGCGGTGGGTGATGTAGCGACGCAAGGAGAGCGGGTTCAGGCGCTCCTG
                      ____________________________________________________________
consensus             CGGATTCAGACAGCGGTGGGTGATGTAGCGACGCAAGGAGAGCGGGTTCAGGCGCTCCTG
 
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rJMSF003C19+          AGCTGGCGGGATCCCCGTGCCACAGTCATTTTCATTGTATTCTGCCTTGCTGCTGCCATC
JMFS152A06-                      TCCCCGTGCCACAGCCATTTTCATTGTATTCTGCCTTGCTGCTGCCATC
rJMSF036A22+          AGCTGGCGGGATCCCCGTGCCACAGTCATTTTCATTGTATTCTGCCTTGCTGCTGCCATC
                      ____________________________________________________________
consensus             AGCTGGCGGGATCCCCGTGCCACAGTCATTTTCATTGTATTCTGCCTTGCTGCTGCCATC
 
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rJMSF003C19+          GTGTTGTACGTGACGCCTTTCCAGTTGTTCGCTATCATGGCGGGGTTTTTCGTGATGCGG
JMFS152A06-           GTGTT                                                       
rJMSF036A22+          GTGTTGTACGTGACGCCTTTCCAGTTGTTCGCTATCATGGCGGGGTTTTTCGTGATGCGG
                      ____________________________________________________________
consensus             GTGTTGTACGTGACGCCTTTCCAGTTGTTCGCTATCATGGCGGGGTTTTTCGTGATGCGG
 
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rJMSF003C19+          CATCCCATGTTTCGACATAAGTTGCCTCCTGCACCTCTCAACTTCTTCCGCAGATTGCCA
rJMSF036A22+          CATCCCATGTTTCGACATAAGTTGCCTCCTGCACCTCTCAACTTCTTCCGCAGATTGCCA
                      ____________________________________________________________
consensus             CATCCCATGTTTCGACATAAGTTGCCTCCTGCACCTCTCAACTTCTTCCGCAGATTGCCA
 
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rJMSF003C19+          GCAAAGACTGATAGTATGTTGTAGGTCATTAAGGTTTGGTCTTCCTGAATCCTGGTACTT
rJMSF036A22+          GCAAAGACTGATAGTATGTTGTAGGTCATTAAGGTTTGGTCTTCCTGAATCCTGGTACTT
                      ____________________________________________________________
consensus             GCAAAGACTGATAGTATGTTGTAGGTCATTAAGGTTTGGTCTTCCTGAATCCTGGTACTT
 
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rJMSF003C19+          GAAGGAATCTGGTCTTGCTTTTATCACTTGTGTTTAGATTCTGTTAGATTTTCTGGTGCT
rJMSF036A22+          GAAGGAATCTGGTCTTGCTTTTATCACTTGTGTTTAGATTCTGTTAGATTTTCTGGTGCT
                      ____________________________________________________________
consensus             GAAGGAATCTGGTCTTGCTTTTATCACTTGTGTTTAGATTCTGTTAGATTTTCTGGTGCT
 
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rJMSF003C19+          GTCAAGAAGTGTGTAAACAATGTAGTAGAAGGAGAGAGCTAGCT                
rJMSF036A22+          GTCAAGAAGTGTGTAAACAATGTAGTAGAAGGAGAGAGCTAGCTTGTAATAAATAGAGAG
                      ____________________________________________________________
consensus             GTCAAGAAGTGTGTAAACAATGTAGTAGAAGGAGAGAGCTAGCTTGTAATAAATAGAGAG
 
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rJMSF036A22+          AATGGTTTGTATTATTATGCATGCAATATCCTGCCCAAGAACTCCAACTGTGAGTTGAGT
                      ____________________________________________________________
consensus             AATGGTTTGTATTATTATGCATGCAATATCCTGCCCAAGAACTCCAACTGTGAGTTGAGT