Contig 005746:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF051H08+                                                                 TTCAG
rJMSF035I11+                                                                  TCAG
                      ____________________________________________________________
consensus                                                                    TTCAG
 
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rJMSF051H08+          ACCATTTAGCCCCTGCCGGAAATAATGGCAATGGCCAACAAAACAACAACGAGTACAACC
rJMSF035I11+          ACCATTTAGCCCCTGCCGGAAATAATGGCAATGGCCAACAAAACAACAACGAGTACAACN
                      ____________________________________________________________
consensus             ACCATTTAGCCCCTGCCGGAAATAATGGCAATGGCCAACAAAACAACAACGAGTACAACC
 
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rJMSF051H08+          TAAGCTTCAGCATTTCGCCGTCTTCTTCATCTTCCGGCCTTCCTGCCGGTCTTAATAGGG
rJMSF035I11+          TAAGCTTCAGCATTTCGCCGTCTTCTTCATCTTCCGGCCTTCCTGCCGGTCTTAATAGGG
                      ____________________________________________________________
consensus             TAAGCTTCAGCATTTCGCCGTCTTCTTCATCTTCCGGCCTTCCTGCCGGTCTTAATAGGG
 
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rJMSF051H08+          GGACCCTTCAGTCCAATTCTTCTTCCCCGTCTCTCCTGCCTCACTTCCAGAGGTTTCCTC
rJMSF035I11+          GGACCCTTCAGTCCAATTCTTCTTCCCCGTCTCTCCTGCCTCACTTCCAGAGGTTTCCTC
                      ____________________________________________________________
consensus             GGACCCTTCAGTCCAATTCTTCTTCCCCGTCTCTCCTGCCTCACTTCCAGAGGTTTCCTC
 
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rJMSF051H08+          CCTTAGACGGATCGTCACCGGGTTTCTTCACCCTCTCCACCGCCGACAACCACCACCACC
rJMSF035I11+          CCTTAGACGGATCGTCACCGGGTTTCTTCACCCTCTCCACCGCCGACAACCACCACCACC
                      ____________________________________________________________
consensus             CCTTAGACGGATCGTCACCGGGTTTCTTCACCCTCTCCACCGCCGACAACCACCACCACC
 
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rJMSF051H08+          ACTTTCTGCCCCGATTCGACGCCCGTTTGCAGCTCTACTACGGGGACACCCACACCGCCG
rJMSF035I11+          ACTTTCTGCCCCGATTCGACGCCCGTTTGCAGCTCTACTACGGGGACACCCACACCGCCG
                      ____________________________________________________________
consensus             ACTTTCTGCCCCGATTCGACGCCCGTTTGCAGCTCTACTACGGGGACACCCACACCGCCG
 
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rJMSF051H08+          CCGCCGCTCGCCCCTCTTCTGACCACAAGGGAAAAGGAAAGAATTGATTTTCATTCAACT
rJMSF035I11+          CCGCCGCTCGCCCCTCTTCTGACCACAAGGGAAAAGGAAAGAATTGATTTTCATTCAACT
                      ____________________________________________________________
consensus             CCGCCGCTCGCCCCTCTTCTGACCACAAGGGAAAAGGAAAGAATTGATTTTCATTCAACT
 
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rJMSF051H08+          TTCACTTCCTCTCAACCCCCCATCTTCAAACCTGGTAAGTGAAGATGGAAGTGGGAACTA
rJMSF035I11+          TTCACTTCCTCTCAACCCCCCATCTTCAAACCTGGTAAGTGAAGATGGAAGTGGGAACTA
                      ____________________________________________________________
consensus             TTCACTTCCTCTCAACCCCCCATCTTCAAACCTGGTAAGTGAAGATGGAAGTGGGAACTA
 
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rJMSF051H08+          ATGTGAAGAAGCTTTCTGGTTTCCCCTTGTGAAGTTGCGGCGCTTATTGTAATGGTAATG
rJMSF035I11+          ATGTGAAGAAGCTTTCTGGTTTCCCCTTGTGAAGTTGCGGCGCTTATTGTAATGGTAATG
                      ____________________________________________________________
consensus             ATGTGAAGAAGCTTTCTGGTTTCCCCTTGTGAAGTTGCGGCGCTTATTGTAATGGTAATG
 
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rJMSF051H08+          GTAATGGTAATTGTGAGATGGGATTTTATCCTCCATTACAAAGTATAAATTATTGTGAGG
rJMSF035I11+          GTAATGGTAATTGTGAGATGGGATTTTATCCTCCATTACAAAGTATAAATTATTGTGAGG
                      ____________________________________________________________
consensus             GTAATGGTAATTGTGAGATGGGATTTTATCCTCCATTACAAAGTATAAATTATTGTGAGG
 
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rJMSF051H08+          CACCCAAAAATATAATATTCCCAGGCAGGCATCCATGCATTTTGGTGCTTTTATGATGGC
rJMSF035I11+          CACCCAAAAATATAATATTCCCAGGCAGGCATCCATGCATTTTGGTGCTTTTATGATGGC
                      ____________________________________________________________
consensus             CACCCAAAAATATAATATTCCCAGGCAGGCATCCATGCATTTTGGTGCTTTTATGATGGC
 
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rJMSF051H08+          TGGTGCCCAGTAGCAGTCCGGTT                                     
rJMSF035I11+          TGGTGCCCAGTAGCAGTCCGGTTTGTTATTTTTGATGAGATAATAGAGATCAGATGATAT
                      ____________________________________________________________
consensus             TGGTGCCCAGTAGCAGTCCGGTTTGTTATTTTTGATGAGATAATAGAGATCAGATGATAT