Contig 005740:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023G18Sequence411007968 (9)ref|XP_004239250.1|56.2PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01692005740 (6)ref|XP_009594235.1|8e-58PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594
JMSF024F24Sequence632007968 (9)ref|XP_010313689.1|2e-15PREDICTED: uncharacterized protein LOC101260608 isoform X1 [Solanum lycopersicu698005740 (6)ref|XP_008787377.1|96.3PREDICTED: uncharacterized protein LOC103705447 [Phoenix dactylifera]
JMSF034C12Sequence671007968 (9)ref|XP_004239250.1|104PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01749005740 (6)ref|XP_009594235.1|7e-74PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594
JMSF034J05Sequence680007968 (9)ref|XP_004239250.1|115PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01726005740 (6)ref|XP_009594235.1|7e-50PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594
JMSF035C23Sequence695007968 (9)ref|XP_004239250.1|50.1PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01607005740 (6)ref|XP_009594235.1|5e-24PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594
JMSF039A16Sequence673007968 (9)ref|XP_004239250.1|115PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01834005740 (6)ref|XP_009594235.1|1e-86PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594

Alignment

This contig is upended


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rJMSF039A16+          TGTGAGCATGGGGCAGGTGAGACCATTTNTAATCTTGCAAAGACAGTGTCAACCTGTGTC
                      ____________________________________________________________
consensus             TGTGAGCATGGGGCAGGTGAGACCATTTNTAATCTTGCAAAGACAGTGTCAACCTGTGTC
 
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rJMSF034J05+                                                                TCAGAG
rJMSF039A16+          AGTGGTATGGATCTTAATTCACTTAGTGCTNGTCTAGCTGCTGTAGTATGTTCCTCAGAG
rJMSF034C12+                                         GTCTAGCTGCTGTAGTATGTTCCTCAGAG
                      ____________________________________________________________
consensus             AGTGGTATGGATCTTAATTCACTTAGTGCTNGTCTAGCTGCTGTAGTATGTTCCTCAGAG
 
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rJMSF034J05+          CAACCACCTCTCCGCCCACTTGGAAGCCCTGCTGGGGATGGGGGCCTCGCTCATCTTAAA
rJMFF023G18+                                            GGGAT-GGGGCCTCGCTCATCTTAAA
rJMSF039A16+          CAACCACCTCTCCGCCCACTTGGAAGCCCTGCTGGGGAT-GGGGCCTCGCTCATCTTAAA
rJMSF024F24+                          CACTTGGAAGCCCTGCTGGGGAT-GGGGCCTCGCTCATCTTNAA
rJMSF034C12+          CAACCACCTCTCCGCCCACTTGGAAGCCCTGCTGGGGAT-GGGGCCTCGCTCATCTTAAA
                      ____________________________________________________________
consensus             CAACCACCTCTCCGCCCACTTGGAAGCCCTGCTGGGGAT-GGGGCCTCGCTCATCTTAAA
 
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rJMSF034J05+          ATCTGTTCTGGAAAGGGGCATCTTACCTGTTAACTGATCCTCAGGCTGCAAACAGCTTCA
rJMFF023G18+          ATCTGTTCTGGAAA-GGGCATCTTACCTGTTAACTGATCCTCAGGCTGCAAACAGCTTCA
rJMSF039A16+          ATCTGTTCTGGAAA-GGGCATCTTACCTGTTAACTGATCCTCAGGCTGCAAACAGCTTCA
rJMSF024F24+          ATCTGTTCTGGAAA-GGGCATCTTACCTGTTAACTGATCCTCAGGCTGCAAACAGCTTCA
rJMSF034C12+          ATCTGTTCTGGAAA-GGGCATCTTACCTGTTAACTGATCCTCAGGCTGCAAACAGCTTCA
                      ____________________________________________________________
consensus             ATCTGTTCTGGAAA-GGGCATCTTACCTGTTAACTGATCCTCAGGCTGCAAACAGCTTCA
 
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rJMSF034J05+          GCATGCCTAACCCTGCCCTATGGCAGGCATCATTTGATGCCTTTTTCAAACTTCTTACGA
rJMFF023G18+          GCATGCCTAACCCTGCCCTATGGCAGGCATCATTTGATGCCTTTTTCAAACTTCTTACGA
rJMSF035C23+                         CCCTATGGCAGGCATCATTTGATGCCTTTTTCAAACTTCTTACGA
rJMSF039A16+          GCATGCCTAACCCTGCCCTATGGCAGGCATCATTTGATGCCTTTTTCAAACTTCTTACGA
rJMSF024F24+          GCATGCCTAACCCTGCCCTATGGCAGGCATCATTTGATGCCTTTTTCAAACTTCTTACGA
rJMSF034C12+          GCATGCCTAACCCTGCCCTATGGCAGGCATCATTTGATGCCTTTTTCAAACTTCTTACGA
                      ____________________________________________________________
consensus             GCATGCCTAACCCTGCCCTATGGCAGGCATCATTTGATGCCTTTTTCAAACTTCTTACGA
 
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rJMSF034J05+          AATATTGTGTTTGTAAA-TTTGATAATATAATGCAAGCAGTTGCACAGACAGAAACAAGC
rJMFF023G18+          AATATTGTGTTTGTAAA-TTTGATAATATAATGCAAGCAGTTGCACAGACAGAAACAAGC
rJMSF035C23+          AATATTGTGTTTGTAAANTTTGATAATATAATGCAAGCAGTTGCACAGACAGAAACAAGC
rJMSF039A16+          AATATTGTGTTTGTAAA-TTTGATAATATAATGCAAGCAGTTGCACAGACAGAAACAAGC
rJMSF024F24+          AATATTGTG-TTGTAAA-TTTGATAATATAATGCAAGCAGTTGCACAGACAGAAACAAGC
rJMSF034C12+          AATATTGTGTTTGTAAA-TTTGATAATATAATGCAAGCAGTTGCACAGACAGAAACAAGC
                      ____________________________________________________________
consensus             AATATTGTGTTTGTAAA-TTTGATAATATAATGCAAGCAGTTGCACAGACAGAAACAAGC
 
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rJMSF034J05+          ACAGACGTAATTAGTCCAGAGGTAGCAAGGGCCATAAACAGTGAAATGCCTGTGGAACTT
rJMFF023G18+          ACAGACGTAATTAGTCCAGAGGTAGCAAGGGCCATAAACAGTGAAATGCCTGTGGAACTT
rJMSF035C23+          ACAGACGTAATTAGTCCAGAGGTAGCAAGGGCCATAAACAGTGAAATGCCTGTGGAACTT
rJMSF039A16+          ACAGACGTAATTAGTCCAGAGGTAGCAAGGGCCATAAACAGTGAAATGCCTGTGGAACTT
rJMSF024F24+          ACAGACGTAATTAGTCCAGAGGTAGCAAGGGCCATAAACAGTGAAATGCCTGTGGAACTT
rJMSF034C12+          ACAGACGTAATTAGTCCAGAGGTAGCAAGGGCCATAAACAGTGAAATGCCTGTGGAACTT
                      ____________________________________________________________
consensus             ACAGACGTAATTAGTCCAGAGGTAGCAAGGGCCATAAACAGTGAAATGCCTGTGGAACTT
 
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rJMSF034J05+          TTACGTGCTAGCCTTCCCCACACAAATGAGCTCCAGAGGAAGATGTTAATGAATTTTGGC
rJMFF023G18+          TTACGTGCTAGCCTTCCCCACACAAATGAGCTCCAGAGGAAGATGTTAATGAATTTTGGC
rJMSF035C23+          TTACGTGCTAGCCTTCCCCACACAAATGAGCTCCAGAGGAAGATGTTAATGAATTTTGGC
rJMSF039A16+          TTACGTGCTAGCCTTCCCCACACAAATGAGCTCCAGAGGAAGATGTTAATGAATTTTGGC
rJMSF024F24+          TTACGTGCTAGCCTTCCCCACACAAATGAGCTCCAGAGGAAGATGTTAATGAATTTTGGC
rJMSF034C12+          TTACGTGCTAGCCTTCCCCACACAAATGAGCTCCAGAGGAAGATGTTAATGAATTTTGGC
                      ____________________________________________________________
consensus             TTACGTGCTAGCCTTCCCCACACAAATGAGCTCCAGAGGAAGATGTTAATGAATTTTGGC
 
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rJMSF034J05+          CAGGGTTCCATACCTCTTGCAGGATTCAACTCTCGTGGTGGAAGCAGCAGAAAAATAAAT
rJMFF023G18+          CAGGGTTCCATACCTCTTGCAGGATTCAACTCTCGTGGTGGAAGCAGCAGAAAAATAAAT
rJMSF035C23+          CAGGGTTCCATACCTCTTGCAGGATTCAACTCTCGTGGTGGAAGCAGCAGAAAAATAAAT
rJMSF039A16+          CAGGGTTCCATACCTCTTGCAGGATTCAACTCTCGTGGTGGAAGCAGCAGAAAAATAAAT
rJMSF024F24+          CAGGGTTCCATACCTCTTGCAGGATTCAACTCTCGTGGTGGAAGCAGCAGAAAAATAAAT
rJMSF034C12+          CAGGGTTCCATACCTCTTGCAGGATTCAACTCTCGTGGTGGAAGCAGCAGAAAAATAAAT
                      ____________________________________________________________
consensus             CAGGGTTCCATACCTCTTGCAGGATTCAACTCTCGTGGTGGAAGCAGCAGAAAAATAAAT
 
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rJMSF034J05+          GCTGAGTCTGTGAGCTGTTAGCAGGGATGTCAAAGGTGTCATTACAATGTCCCAGTTGTA
rJMFF023G18+          GCTGAGTCTGTGAGCTGTTAGCAGGGATGTCAAAGGTGTCATTACAATGTCCCAGTTGTA
rJMSF035C23+          GCTGAGTCTGTGAGCTGTTAGCAGGGATGTCAAAGGTGTCATTACAATGTCCCAGTTGTA
rJMSF039A16+          GCTGAGTCTGTGAGCTGTTAGCAGGGATGTCAAAGGTGTCATTACAATGTCCCAGTTGTA
rJMSF024F24+          GCTGAGTCTGTGAGCTGTTAGCAGGGATGTCAAAAGTGTCATTACAATGTCCCAGTTGTA
rJMSF034C12+          GCTGAGTCTGTGAGCTGTTAGCAGGGATGTCAAAGGTGTCATTACAATGTCCCAGTTGTA
                      ____________________________________________________________
consensus             GCTGAGTCTGTGAGCTGTTAGCAGGGATGTCAAAGGTGTCATTACAATGTCCCAGTTGTA
 
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rJMSF034J05+          TATACATAATTCTCAAGGTCATCACTTGGCTGCTTGTGCCATTGAATAGCCAGAAACAGA
rJMFF023G18+          TATACATAATTCTCAAGGTCATCACTTGGCTGCTTGTGCCATTGAATAGCCAGAAACAGA
rJMSF035C23+          TATACATAATTCTCAAGGTCATCACTTGGCTGCTTGTGCCATTGAATAGCCAGAAACAGA
rJMSF039A16+          TATACATAATTCTCAAGGTCATCACTTGGCTGCTTGTGCCATTGAATAGCCAGAAACAGA
rJMSF024F24+          TATACATAATTCTCAAGGTCATCACTTGGCTGCTTGTGCCATTGAATAGCCAGAAACAGA
rJMSF034C12+          TATACATAATTCTCAAGGTCATCACTTGGCTGCTTGTGCCATTGAATAGCCAGAAACAGA
                      ____________________________________________________________
consensus             TATACATAATTCTCAAGGTCATCACTTGGCTGCTTGTGCCATTGAATAGCCAGAAACAGA
 
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rJMSF034J05+          AACAAGGGTATGCATATACTATAGGCATCATTTTACTGCCTGTAGTGTTCTCTCTTTCAT
rJMFF023G18+          AACAAGGGTATGCATATACTATAGGCATCATTTTACTGCCTGTAGTGTTCTCTCTTTCAT
rJMSF035C23+          AACAAGGGTATGC--ATACTATAGGCATCATTTTACTGCCTGTAGTGTTCTCTCTTTCAT
rJMSF039A16+          AACAAGGGTATGCATATACTATAGGCATCATTTTACTGCCTGTAGTGTTCTCTCTTTCAT
rJMSF024F24+          AACAAGGGTATGCATATACTATAGGCATCATTTTACTGCCTGTAGTGTTCTCTCTTTCAT
rJMSF034C12+          AACAAGGGTATGCATATACTATAGGCATCATTTTACTGCCTGTAGTGTTCTCTCTTTCAT
                      ____________________________________________________________
consensus             AACAAGGGTATGCATATACTATAGGCATCATTTTACTGCCTGTAGTGTTCTCTCTTTCAT
 
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rJMSF034J05+          GTCAACTTGTTTTCTTCCCCTCCCCGTTCTCTTTGCACTCTCTCTGCATCTTCTCTTTTA
rJMFF023G18+          GTCAACTTGTTTTCTTCCCCTCCCCGTTCTCTTTGCACTCTCTCTGCATCTTCTCTTTTA
rJMSF035C23+          GTCAACTTGTTTTCTTCCCCTCCCCGTTCTCTTTGCACTCTCTCTGCATCTTCTCTTTTA
rJMSF039A16+          GTCAACTTGTTTTCTTCCCCTCCCCGTTCTCTTTGCACTCTCTCTGCATCTTCTCTTTTA
rJMSF024F24+          GTCAACTTGTTTTCTTCCCCTCCCCGTTCTCTTTGCACTCTCTCTGCATCTTCTCTTTTA
rJMSF034C12+          GTCAACTTGTTTTCTTCCCCTCCCCGTTCTCTTTGCACTCTCTCTGCATCTTCTCTTTTA
                      ____________________________________________________________
consensus             GTCAACTTGTTTTCTTCCCCTCCCCGTTCTCTTTGCACTCTCTCTGCATCTTCTCTTTTA
 
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rJMSF034J05+          GTTTTATTGTTCTCGTTTCTGGGTTAGAATATGTTCTCTCCTTGTGACAAGAC       
rJMFF023G18+          GTTTTATTGTTCTCGTTTCTGGGTTAGAATATGTTCTCTCC                   
rJMSF035C23+          GTTTTATTGTTCTCGTTTCTGGGTTAGAATATGTTCTCTCC                   
rJMSF039A16+          GTTTTATTGTTCTCGTTTCTGGGTTAGAATATGTTCTCTCCTTGTGACAAGACAATG   
rJMSF024F24+          GTTTTATTGTTCTCGTTTCTGGGTTAGAATATGTTCTCTCCTTGTGACAAGACAATG   
rJMSF034C12+          GTTTTATTGTTCTCGTTTCTGGGTTAGAATATGTTCTCTCCTTGTGACAAGACAATGTCT
                      ____________________________________________________________
consensus             GTTTTATTGTTCTCGTTTCTGGGTTAGAATATGTTCTCTCCTTGTGACAAGACAATGTCT