clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF023G18 | Sequence | 411 | 007968 (9) | ref|XP_004239250.1| | 56.2 | PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01 | 692 | 005740 (6) | ref|XP_009594235.1| | 8e-58 | PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594 |
JMSF024F24 | Sequence | 632 | 007968 (9) | ref|XP_010313689.1| | 2e-15 | PREDICTED: uncharacterized protein LOC101260608 isoform X1 [Solanum lycopersicu | 698 | 005740 (6) | ref|XP_008787377.1| | 96.3 | PREDICTED: uncharacterized protein LOC103705447 [Phoenix dactylifera] |
JMSF034C12 | Sequence | 671 | 007968 (9) | ref|XP_004239250.1| | 104 | PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01 | 749 | 005740 (6) | ref|XP_009594235.1| | 7e-74 | PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594 |
JMSF034J05 | Sequence | 680 | 007968 (9) | ref|XP_004239250.1| | 115 | PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01 | 726 | 005740 (6) | ref|XP_009594235.1| | 7e-50 | PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594 |
JMSF035C23 | Sequence | 695 | 007968 (9) | ref|XP_004239250.1| | 50.1 | PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01 | 607 | 005740 (6) | ref|XP_009594235.1| | 5e-24 | PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594 |
JMSF039A16 | Sequence | 673 | 007968 (9) | ref|XP_004239250.1| | 115 | PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01 | 834 | 005740 (6) | ref|XP_009594235.1| | 1e-86 | PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594 |
This contig is upended
. : . : . : . : . : . :
rJMSF039A16+ TGTGAGCATGGGGCAGGTGAGACCATTTNTAATCTTGCAAAGACAGTGTCAACCTGTGTC
____________________________________________________________
consensus TGTGAGCATGGGGCAGGTGAGACCATTTNTAATCTTGCAAAGACAGTGTCAACCTGTGTC
. : . : . : . : . : . :
rJMSF034J05+ TCAGAG
rJMSF039A16+ AGTGGTATGGATCTTAATTCACTTAGTGCTNGTCTAGCTGCTGTAGTATGTTCCTCAGAG
rJMSF034C12+ GTCTAGCTGCTGTAGTATGTTCCTCAGAG
____________________________________________________________
consensus AGTGGTATGGATCTTAATTCACTTAGTGCTNGTCTAGCTGCTGTAGTATGTTCCTCAGAG
. : . : . : . : . : . :
rJMSF034J05+ CAACCACCTCTCCGCCCACTTGGAAGCCCTGCTGGGGATGGGGGCCTCGCTCATCTTAAA
rJMFF023G18+ GGGAT-GGGGCCTCGCTCATCTTAAA
rJMSF039A16+ CAACCACCTCTCCGCCCACTTGGAAGCCCTGCTGGGGAT-GGGGCCTCGCTCATCTTAAA
rJMSF024F24+ CACTTGGAAGCCCTGCTGGGGAT-GGGGCCTCGCTCATCTTNAA
rJMSF034C12+ CAACCACCTCTCCGCCCACTTGGAAGCCCTGCTGGGGAT-GGGGCCTCGCTCATCTTAAA
____________________________________________________________
consensus CAACCACCTCTCCGCCCACTTGGAAGCCCTGCTGGGGAT-GGGGCCTCGCTCATCTTAAA
. : . : . : . : . : . :
rJMSF034J05+ ATCTGTTCTGGAAAGGGGCATCTTACCTGTTAACTGATCCTCAGGCTGCAAACAGCTTCA
rJMFF023G18+ ATCTGTTCTGGAAA-GGGCATCTTACCTGTTAACTGATCCTCAGGCTGCAAACAGCTTCA
rJMSF039A16+ ATCTGTTCTGGAAA-GGGCATCTTACCTGTTAACTGATCCTCAGGCTGCAAACAGCTTCA
rJMSF024F24+ ATCTGTTCTGGAAA-GGGCATCTTACCTGTTAACTGATCCTCAGGCTGCAAACAGCTTCA
rJMSF034C12+ ATCTGTTCTGGAAA-GGGCATCTTACCTGTTAACTGATCCTCAGGCTGCAAACAGCTTCA
____________________________________________________________
consensus ATCTGTTCTGGAAA-GGGCATCTTACCTGTTAACTGATCCTCAGGCTGCAAACAGCTTCA
. : . : . : . : . : . :
rJMSF034J05+ GCATGCCTAACCCTGCCCTATGGCAGGCATCATTTGATGCCTTTTTCAAACTTCTTACGA
rJMFF023G18+ GCATGCCTAACCCTGCCCTATGGCAGGCATCATTTGATGCCTTTTTCAAACTTCTTACGA
rJMSF035C23+ CCCTATGGCAGGCATCATTTGATGCCTTTTTCAAACTTCTTACGA
rJMSF039A16+ GCATGCCTAACCCTGCCCTATGGCAGGCATCATTTGATGCCTTTTTCAAACTTCTTACGA
rJMSF024F24+ GCATGCCTAACCCTGCCCTATGGCAGGCATCATTTGATGCCTTTTTCAAACTTCTTACGA
rJMSF034C12+ GCATGCCTAACCCTGCCCTATGGCAGGCATCATTTGATGCCTTTTTCAAACTTCTTACGA
____________________________________________________________
consensus GCATGCCTAACCCTGCCCTATGGCAGGCATCATTTGATGCCTTTTTCAAACTTCTTACGA
. : . : . : . : . : . :
rJMSF034J05+ AATATTGTGTTTGTAAA-TTTGATAATATAATGCAAGCAGTTGCACAGACAGAAACAAGC
rJMFF023G18+ AATATTGTGTTTGTAAA-TTTGATAATATAATGCAAGCAGTTGCACAGACAGAAACAAGC
rJMSF035C23+ AATATTGTGTTTGTAAANTTTGATAATATAATGCAAGCAGTTGCACAGACAGAAACAAGC
rJMSF039A16+ AATATTGTGTTTGTAAA-TTTGATAATATAATGCAAGCAGTTGCACAGACAGAAACAAGC
rJMSF024F24+ AATATTGTG-TTGTAAA-TTTGATAATATAATGCAAGCAGTTGCACAGACAGAAACAAGC
rJMSF034C12+ AATATTGTGTTTGTAAA-TTTGATAATATAATGCAAGCAGTTGCACAGACAGAAACAAGC
____________________________________________________________
consensus AATATTGTGTTTGTAAA-TTTGATAATATAATGCAAGCAGTTGCACAGACAGAAACAAGC
. : . : . : . : . : . :
rJMSF034J05+ ACAGACGTAATTAGTCCAGAGGTAGCAAGGGCCATAAACAGTGAAATGCCTGTGGAACTT
rJMFF023G18+ ACAGACGTAATTAGTCCAGAGGTAGCAAGGGCCATAAACAGTGAAATGCCTGTGGAACTT
rJMSF035C23+ ACAGACGTAATTAGTCCAGAGGTAGCAAGGGCCATAAACAGTGAAATGCCTGTGGAACTT
rJMSF039A16+ ACAGACGTAATTAGTCCAGAGGTAGCAAGGGCCATAAACAGTGAAATGCCTGTGGAACTT
rJMSF024F24+ ACAGACGTAATTAGTCCAGAGGTAGCAAGGGCCATAAACAGTGAAATGCCTGTGGAACTT
rJMSF034C12+ ACAGACGTAATTAGTCCAGAGGTAGCAAGGGCCATAAACAGTGAAATGCCTGTGGAACTT
____________________________________________________________
consensus ACAGACGTAATTAGTCCAGAGGTAGCAAGGGCCATAAACAGTGAAATGCCTGTGGAACTT
. : . : . : . : . : . :
rJMSF034J05+ TTACGTGCTAGCCTTCCCCACACAAATGAGCTCCAGAGGAAGATGTTAATGAATTTTGGC
rJMFF023G18+ TTACGTGCTAGCCTTCCCCACACAAATGAGCTCCAGAGGAAGATGTTAATGAATTTTGGC
rJMSF035C23+ TTACGTGCTAGCCTTCCCCACACAAATGAGCTCCAGAGGAAGATGTTAATGAATTTTGGC
rJMSF039A16+ TTACGTGCTAGCCTTCCCCACACAAATGAGCTCCAGAGGAAGATGTTAATGAATTTTGGC
rJMSF024F24+ TTACGTGCTAGCCTTCCCCACACAAATGAGCTCCAGAGGAAGATGTTAATGAATTTTGGC
rJMSF034C12+ TTACGTGCTAGCCTTCCCCACACAAATGAGCTCCAGAGGAAGATGTTAATGAATTTTGGC
____________________________________________________________
consensus TTACGTGCTAGCCTTCCCCACACAAATGAGCTCCAGAGGAAGATGTTAATGAATTTTGGC
. : . : . : . : . : . :
rJMSF034J05+ CAGGGTTCCATACCTCTTGCAGGATTCAACTCTCGTGGTGGAAGCAGCAGAAAAATAAAT
rJMFF023G18+ CAGGGTTCCATACCTCTTGCAGGATTCAACTCTCGTGGTGGAAGCAGCAGAAAAATAAAT
rJMSF035C23+ CAGGGTTCCATACCTCTTGCAGGATTCAACTCTCGTGGTGGAAGCAGCAGAAAAATAAAT
rJMSF039A16+ CAGGGTTCCATACCTCTTGCAGGATTCAACTCTCGTGGTGGAAGCAGCAGAAAAATAAAT
rJMSF024F24+ CAGGGTTCCATACCTCTTGCAGGATTCAACTCTCGTGGTGGAAGCAGCAGAAAAATAAAT
rJMSF034C12+ CAGGGTTCCATACCTCTTGCAGGATTCAACTCTCGTGGTGGAAGCAGCAGAAAAATAAAT
____________________________________________________________
consensus CAGGGTTCCATACCTCTTGCAGGATTCAACTCTCGTGGTGGAAGCAGCAGAAAAATAAAT
. : . : . : . : . : . :
rJMSF034J05+ GCTGAGTCTGTGAGCTGTTAGCAGGGATGTCAAAGGTGTCATTACAATGTCCCAGTTGTA
rJMFF023G18+ GCTGAGTCTGTGAGCTGTTAGCAGGGATGTCAAAGGTGTCATTACAATGTCCCAGTTGTA
rJMSF035C23+ GCTGAGTCTGTGAGCTGTTAGCAGGGATGTCAAAGGTGTCATTACAATGTCCCAGTTGTA
rJMSF039A16+ GCTGAGTCTGTGAGCTGTTAGCAGGGATGTCAAAGGTGTCATTACAATGTCCCAGTTGTA
rJMSF024F24+ GCTGAGTCTGTGAGCTGTTAGCAGGGATGTCAAAAGTGTCATTACAATGTCCCAGTTGTA
rJMSF034C12+ GCTGAGTCTGTGAGCTGTTAGCAGGGATGTCAAAGGTGTCATTACAATGTCCCAGTTGTA
____________________________________________________________
consensus GCTGAGTCTGTGAGCTGTTAGCAGGGATGTCAAAGGTGTCATTACAATGTCCCAGTTGTA
. : . : . : . : . : . :
rJMSF034J05+ TATACATAATTCTCAAGGTCATCACTTGGCTGCTTGTGCCATTGAATAGCCAGAAACAGA
rJMFF023G18+ TATACATAATTCTCAAGGTCATCACTTGGCTGCTTGTGCCATTGAATAGCCAGAAACAGA
rJMSF035C23+ TATACATAATTCTCAAGGTCATCACTTGGCTGCTTGTGCCATTGAATAGCCAGAAACAGA
rJMSF039A16+ TATACATAATTCTCAAGGTCATCACTTGGCTGCTTGTGCCATTGAATAGCCAGAAACAGA
rJMSF024F24+ TATACATAATTCTCAAGGTCATCACTTGGCTGCTTGTGCCATTGAATAGCCAGAAACAGA
rJMSF034C12+ TATACATAATTCTCAAGGTCATCACTTGGCTGCTTGTGCCATTGAATAGCCAGAAACAGA
____________________________________________________________
consensus TATACATAATTCTCAAGGTCATCACTTGGCTGCTTGTGCCATTGAATAGCCAGAAACAGA
. : . : . : . : . : . :
rJMSF034J05+ AACAAGGGTATGCATATACTATAGGCATCATTTTACTGCCTGTAGTGTTCTCTCTTTCAT
rJMFF023G18+ AACAAGGGTATGCATATACTATAGGCATCATTTTACTGCCTGTAGTGTTCTCTCTTTCAT
rJMSF035C23+ AACAAGGGTATGC--ATACTATAGGCATCATTTTACTGCCTGTAGTGTTCTCTCTTTCAT
rJMSF039A16+ AACAAGGGTATGCATATACTATAGGCATCATTTTACTGCCTGTAGTGTTCTCTCTTTCAT
rJMSF024F24+ AACAAGGGTATGCATATACTATAGGCATCATTTTACTGCCTGTAGTGTTCTCTCTTTCAT
rJMSF034C12+ AACAAGGGTATGCATATACTATAGGCATCATTTTACTGCCTGTAGTGTTCTCTCTTTCAT
____________________________________________________________
consensus AACAAGGGTATGCATATACTATAGGCATCATTTTACTGCCTGTAGTGTTCTCTCTTTCAT
. : . : . : . : . : . :
rJMSF034J05+ GTCAACTTGTTTTCTTCCCCTCCCCGTTCTCTTTGCACTCTCTCTGCATCTTCTCTTTTA
rJMFF023G18+ GTCAACTTGTTTTCTTCCCCTCCCCGTTCTCTTTGCACTCTCTCTGCATCTTCTCTTTTA
rJMSF035C23+ GTCAACTTGTTTTCTTCCCCTCCCCGTTCTCTTTGCACTCTCTCTGCATCTTCTCTTTTA
rJMSF039A16+ GTCAACTTGTTTTCTTCCCCTCCCCGTTCTCTTTGCACTCTCTCTGCATCTTCTCTTTTA
rJMSF024F24+ GTCAACTTGTTTTCTTCCCCTCCCCGTTCTCTTTGCACTCTCTCTGCATCTTCTCTTTTA
rJMSF034C12+ GTCAACTTGTTTTCTTCCCCTCCCCGTTCTCTTTGCACTCTCTCTGCATCTTCTCTTTTA
____________________________________________________________
consensus GTCAACTTGTTTTCTTCCCCTCCCCGTTCTCTTTGCACTCTCTCTGCATCTTCTCTTTTA
. : . : . : . : . : . :
rJMSF034J05+ GTTTTATTGTTCTCGTTTCTGGGTTAGAATATGTTCTCTCCTTGTGACAAGAC
rJMFF023G18+ GTTTTATTGTTCTCGTTTCTGGGTTAGAATATGTTCTCTCC
rJMSF035C23+ GTTTTATTGTTCTCGTTTCTGGGTTAGAATATGTTCTCTCC
rJMSF039A16+ GTTTTATTGTTCTCGTTTCTGGGTTAGAATATGTTCTCTCCTTGTGACAAGACAATG
rJMSF024F24+ GTTTTATTGTTCTCGTTTCTGGGTTAGAATATGTTCTCTCCTTGTGACAAGACAATG
rJMSF034C12+ GTTTTATTGTTCTCGTTTCTGGGTTAGAATATGTTCTCTCCTTGTGACAAGACAATGTCT
____________________________________________________________
consensus GTTTTATTGTTCTCGTTTCTGGGTTAGAATATGTTCTCTCCTTGTGACAAGACAATGTCT