Contig 005730:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031E21Sequence603002417 (2)ref|XP_009798863.1|3e-80PREDICTED: 4-coumarate--CoA ligase 1 [Nicotiana sylvestris] sp|O24145.1|4CL1_TOB682005730 (2)gb|AEO52694.1|7e-814-coumarate:CoA ligase [Petunia x hybrida]
JMSF043O24Sequence622002417 (2)ref|XP_009798863.1|7e-82PREDICTED: 4-coumarate--CoA ligase 1 [Nicotiana sylvestris] sp|O24145.1|4CL1_TOB680005730 (2)gb|AEO52694.1|3e-1144-coumarate:CoA ligase [Petunia x hybrida]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF043O24+ CTGGTTCGTGTGGGACAGTTGTTAGAAATGCAGAAA
                      ____________________________________________________________
consensus CTGGTTCGTGTGGGACAGTTGTTAGAAATGCAGAAA
 
. : . : . : . : . : . :
rJMSF043O24+ TGAGAATTGTGGATCCGGATACTGGATCCTCTTTACCCCGGAACCAACCGGGAGAAATAT
rJMSF031E21+ CCCGGAACCNACCGGGAGAAATAT
                      ____________________________________________________________
consensus TGAGAATTGTGGATCCGGATACTGGATCCTCTTTACCCCGGAACCAACCGGGAGAAATAT
 
. : . : . : . : . : . :
rJMSF043O24+ GCATTAGGGGTGACCAAATCATGAAAGGTTATTTGAATGATCCAGAGGCTACAGAGAGAA
rJMSF031E21+ GCATTA-GGGNGACCCAATCATGAAAGGTTA-TTGAATGATCCAGAGGCTACAGAGAGAA
                      ____________________________________________________________
consensus GCATTAGGGGTGACCCAATCATGAAAGGTTATTTGAATGATCCAGAGGCTACAGAGAGAA
 
. : . : . : . : . : . :
rJMSF043O24+ CAATCGACAAGGAAGGATGGTTACACACCGGAGATATAGGATACATCGACGATGACGATG
rJMSF031E21+ CAATCGACAAGGAAGGATGGTTACACACCGGAGATATAGGATACATCGACGATGACGATG
                      ____________________________________________________________
consensus CAATCGACAAGGAAGGATGGTTACACACCGGAGATATAGGATACATCGACGATGACGATG
 
. : . : . : . : . : . :
rJMSF043O24+ AGCTTTTCATCGTGGATCGCCTCAAGGAGCTTATCAAGTACAAGGGCTTTCAGGTCGCCC
rJMSF031E21+ AGCTTTTCATCGTGGATCGCCTCAAGGAGCTTATCAAGTACAAGGGCTTTCAGGTCGCCC
                      ____________________________________________________________
consensus AGCTTTTCATCGTGGATCGCCTCAAGGAGCTTATCAAGTACAAGGGCTTTCAGGTCGCCC
 
. : . : . : . : . : . :
rJMSF043O24+ CAGCTGAACTTGAAGCCTTACTCCTTACCCACCCACAAATTTCTGATGCTGCTGTTATCC
rJMSF031E21+ CAGCTGAACTTGAAGCCTTACTCCTTACCCACCCACAAATTTCTGATGCTGCTGTTATCC
                      ____________________________________________________________
consensus CAGCTGAACTTGAAGCCTTACTCCTTACCCACCCACAAATTTCTGATGCTGCTGTTATCC
 
. : . : . : . : . : . :
rJMSF043O24+ CCATGAAAGATGAGCAGGCAGGGGAAGTTCCAGTTGCTTTTGTTGTTAAAACTAATGGAT
rJMSF031E21+ CCATGAAAGATGAGCAGGCAGGGGAAGTTCCAGTTGCTTTTGTTGTTAAAACTAATGGAT
                      ____________________________________________________________
consensus CCATGAAAGATGAGCAGGCAGGGGAAGTTCCAGTTGCTTTTGTTGTTAAAACTAATGGAT
 
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rJMSF043O24+ GTAGCCTCACTGAGGATGAAGTTAAAGAGTTTGTCTCTAAACAGGTGATATTTTACAAGA
rJMSF031E21+ GTAGCCTCACTGAGGATGAAGTTAAAGAGTTTGTCTCTAAACAGGTGATATTTTACAAGA
                      ____________________________________________________________
consensus GTAGCCTCACTGAGGATGAAGTTAAAGAGTTTGTCTCTAAACAGGTGATATTTTACAAGA
 
. : . : . : . : . : . :
rJMSF043O24+ GAATAAAAAAGGTATTTTTTGTTGATTCTGTTCCAAAGTCTCCCTCAGGCAAAATTCTAA
rJMSF031E21+ GAATAAAAAAGGTATTTTTTGTTGATTCTGTTCCAAAGTCTCCCTCAGGCAAAATTCTAA
                      ____________________________________________________________
consensus GAATAAAAAAGGTATTTTTTGTTGATTCTGTTCCAAAGTCTCCCTCAGGCAAAATTCTAA
 
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rJMSF043O24+ GAAAGAACCTAAGAGCAAGACTAGAAGCTGGAATCCCTAATTAGTTCTCATCCCATCCAT
rJMSF031E21+ GAAAGAACCTAAGAGCAAGACTAGAAGCTGGAATCCCTAATTAGTTCTCATCCCATCCAT
                      ____________________________________________________________
consensus GAAAGAACCTAAGAGCAAGACTAGAAGCTGGAATCCCTAATTAGTTCTCATCCCATCCAT
 
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rJMSF043O24+ CCCTGTGGGACTGCACTGCAAAAATTATTGATTTCATTCTCATCTGTTGTCTTTACAATA
rJMSF031E21+ CCCTGTGGGACTGCACTGCAAAAATTATTGATTTCATTCTCATCTGTTGTCTTTACAATA
                      ____________________________________________________________
consensus CCCTGTGGGACTGCACTGCAAAAATTATTGATTTCATTCTCATCTGTTGTCTTTACAATA
 
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rJMSF043O24+ TCATATTATATATATCATTTCCAAC
rJMSF031E21+ TCATATTATATATATCATTTCCAACACTGCTTAATGTTAATGCTATAAAGAACACTGAAT
                      ____________________________________________________________
consensus TCATATTATATATATCATTTCCAACACTGCTTAATGTTAATGCTATAAAGAACACTGAAT
 
. : . : . : . : . : . :
rJMSF031E21+ TGAATGTTTGATAGTATTATATCCCCACTGCAATTTAATCATCTCAATATGATTAAATGC
                      ____________________________________________________________
consensus TGAATGTTTGATAGTATTATATCCCCACTGCAATTTAATCATCTCAATATGATTAAATGC