Contig 005726:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF030M10Sequence642005726 (2)dbj|BAO57276.1|2e-65xyloglucan endotransglucosylase/hydrolase [Ipomoea nil]724005726 (2)dbj|BAO57276.1|1e-88xyloglucan endotransglucosylase/hydrolase [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF030M10- GGGGGGCTGTGCATTTGGGTTCACAAGCTTTATGCAATTTCTTTCATAGCTAGCCGC
                      ____________________________________________________________
consensus GGGGGGCTGTGCATTTGGGTTCACAAGCTTTATGCAATTTCTTTCATAGCTAGCCGC
 
. : . : . : . : . : . :
JMSF030M10- TCTCTCTTCCTCTCCACAAACCCACTATATAATATATATTCTCTTCCACTTTCCTTCAAA
                      ____________________________________________________________
consensus TCTCTCTTCCTCTCCACAAACCCACTATATAATATATATTCTCTTCCACTTTCCTTCAAA
 
. : . : . : . : . : . :
JMSF030M10- CCCCATTTCCGCACTCGCCAAAATCTCACAATACCTGCAATGAGAAGGGGGTGTTCAAGA
                      ____________________________________________________________
consensus CCCCATTTCCGCACTCGCCAAAATCTCACAATACCTGCAATGAGAAGGGGGTGTTCAAGA
 
. : . : . : . : . : . :
JMSF030M10- ATGCTGGAGGTTCTTGTTATGGTGGCCCTGAGTTCTTGCTTGGCTTCTTCTTCTTACGCT
                      ____________________________________________________________
consensus ATGCTGGAGGTTCTTGTTATGGTGGCCCTGAGTTCTTGCTTGGCTTCTTCTTCTTACGCT
 
. : . : . : . : . : . :
JMSF030M10- GCTAACTTCTACCAAGATTTTGATATGACTTGGGGTGGCAATGGCACCAAGATTTCTAAT
                      ____________________________________________________________
consensus GCTAACTTCTACCAAGATTTTGATATGACTTGGGGTGGCAATGGCACCAAGATTTCTAAT
 
. : . : . : . : . : . :
JMSF030M10- GGAGGCCAGCTTCTTTCCTTGTCGCTAGACACCACTTCTGGGTCTGCTTTCCGGTCCAAG
rJMSF030M10+ CAAG
                      ____________________________________________________________
consensus GGAGGCCAGCTTCTTTCCTTGTCGCTAGACACCACTTCTGGGTCTGCTTTCCGGTCCAAG
 
. : . : . : . : . : . :
JMSF030M10- AAAGACTTTCTCTTTGGCAGAGTTGAGATGGAGATGAAGCTCGTTCCTGGAAATTCTGCC
rJMSF030M10+ AAAGACTTTCTCTTTGGCAGAGTTGAGATGGAGATGAAGCTCGTTCCTGGAAATTCTGCC
                      ____________________________________________________________
consensus AAAGACTTTCTCTTTGGCAGAGTTGAGATGGAGATGAAGCTCGTTCCTGGAAATTCTGCC
 
. : . : . : . : . : . :
JMSF030M10- GGCACTGTTACTGCCTTTTATTTATCTGCTCAAGGACCAACCCATGATGAAATAGATTTT
rJMSF030M10+ GGCACTGTTACTGCCTTTTATTTATCTGCTCAAGGACCAACCCATGATGAAATAGATTTT
                      ____________________________________________________________
consensus GGCACTGTTACTGCCTTTTATTTATCTGCTCAAGGACCAACCCATGATGAAATAGATTTT
 
. : . : . : . : . : . :
JMSF030M10- GAGTTCCTCGGAAATGTCACCGGCGAACCTTACGTCCTCCATACCAATGTCATCACTCAG
rJMSF030M10+ GAGTTCCTCGGAAATGTCACCGGCGAACCTTACGTCCTCCATACCAATGTCATCACTCAG
                      ____________________________________________________________
consensus GAGTTCCTCGGAAATGTCACCGGCGAACCTTACGTCCTCCATACCAATGTCATCACTCAG
 
. : . : . : . : . : . :
JMSF030M10- GGCAGAGGCGGCAGAGAGCAGCAATTCTACCTATGGTTTGACCCAACCAAGAACTTCCAC
rJMSF030M10+ GGCAGAGGCGGCAGAGAGCAGCAATTCTACCTATGGTTTGACCCAACCAAGAACTTCCAC
                      ____________________________________________________________
consensus GGCAGAGGCGGCAGAGAGCAGCAATTCTACCTATGGTTTGACCCAACCAAGAACTTCCAC
 
. : . : . : . : . : . :
JMSF030M10- ACCTACACACTCGTTTGGAAGCCCCAACACATCATTTTTCTGGTG
rJMSF030M10+ ACCTACACACTCGTTTGGAAGCCCCAACACATCATTTTTCTGGTGGATAAGATTCCCATA
                      ____________________________________________________________
consensus ACCTACACACTCGTTTGGAAGCCCCAACACATCATTTTTCTGGTGGATAAGATTCCCATA
 
. : . : . : . : . : . :
rJMSF030M10+ AGGGTGTTCAAGAATGATGAAAATTGGGGTGCCATTCCCGAATAATCAGAGCATGAAGGT
                      ____________________________________________________________
consensus AGGGTGTTCAAGAATGATGAAAATTGGGGTGCCATTCCCGAATAATCAGAGCATGAAGGT
 
. : . : . : . : . : . :
rJMSF030M10+ ATACTCAAGCATATGGAATGCAGAAGCCTGGGCCACAAGGAGTGGGGAAGAAAAGATTGA
                      ____________________________________________________________
consensus ATACTCAAGCATATGGAATGCAGAAGCCTGGGCCACAAGGAGTGGGGAAGAAAAGATTGA
 
. : . : . : . : . : . :
rJMSF030M10+ CTGGTCCTACGCACCGTTTACAGCTCAGTGCAGAAACTTCCAAGCCAAAACCTTCCCCAG
                      ____________________________________________________________
consensus CTGGTCCTACGCACCGTTTACAGCTCAGTGCAGAAACTTCCAAGCCAAAACCTTCCCCAG
 
. : . : . : . : . : . :
rJMSF030M10+ TTCTCACCAGTTCACTAATGGAGAATGGGAAAGCCAAGAACTTGATGACCATGGAAAAAG
                      ____________________________________________________________
consensus TTCTCACCAGTTCACTAATGGAGAATGGGAAAGCCAAGAACTTGATGACCATGGAAAAAG
 
. : . : . : . : . : . :
rJMSF030M10+ CAGGTTGAAATGGATTCAGAAAAAGTTCATGGTCTACAATTATTGCACTGACTTCAAACG
                      ____________________________________________________________
consensus CAGGTTGAAATGGATTCAGAAAAAGTTCATGGTCTACAATTATTGCACTGACTTCAAACG
 
. : . : . : . : . : . :
rJMSF030M10+ CTTCCCAATGGGCATTCCTGGAGAGTGTAGAATACCCATGTTTTAGTTTTTGATTTAGTT
                      ____________________________________________________________
consensus CTTCCCAATGGGCATTCCTGGAGAGTGTAGAATACCCATGTTTTAGTTTTTGATTTAGTT
 
. : . : . : . : . : . :
rJMSF030M10+ TTTCCACGAAAAAATTAACATTTATGTAAAAAGAAGAATTGGATCTGTAAAACTGGAATT
                      ____________________________________________________________
consensus TTTCCACGAAAAAATTAACATTTATGTAAAAAGAAGAATTGGATCTGTAAAACTGGAATT