Contig 005723:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF030H20-                                                                      G
                      ____________________________________________________________
consensus                                                                        G
 
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JMSF030H20-           ATACCGTTAGTTAGGAGAGTCTGATAACCTTCTCCTTCTCTCTCTCTCTCTCTCATCATT
                      ____________________________________________________________
consensus             ATACCGTTAGTTAGGAGAGTCTGATAACCTTCTCCTTCTCTCTCTCTCTCTCTCATCATT
 
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JMSF030H20-           CTCCGGCGACGGCGACCAGTACAGGATGAAGACAATCATGGCGAGGAACCCAGGCGATTC
                      ____________________________________________________________
consensus             CTCCGGCGACGGCGACCAGTACAGGATGAAGACAATCATGGCGAGGAACCCAGGCGATTC
 
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JMSF030H20-           CTTCTCCTTCTCCAGAAGATACTTCCACTCGAAGATCAAGAAGCTCGAGGAGGAGGAAGA
rJMSF002C24+                   CTCCAGAAGATACTTCCACTCGAAGATCAAGAAGCTCGAGGAGGAGGAAGA
                      ____________________________________________________________
consensus             CTTCTCCTTCTCCAGAAGATACTTCCACTCGAAGATCAAGAAGCTCGAGGAGGAGGAAGA
 
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JMSF030H20-           CGACGACCGCGAGGAGATTCTAGAGTGGAAGCTCCCGGAGGAGCTCGATCTCGCAGCGCC
rJMSF002C24+          CGACGACCGCGAGGAGATTCTAGAGTGGAAGCTCCCGGAGGAGCTCGATCTCGCAGCGCC
                      ____________________________________________________________
consensus             CGACGACCGCGAGGAGATTCTAGAGTGGAAGCTCCCGGAGGAGCTCGATCTCGCAGCGCC
 
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JMSF030H20-           GCCGCCGCGGCGTAAGACGGCGGTTTCAAAGCTCCGGTCGGCTCTCACGTTCGGCATCAA
rJMSF002C24+          GCCGCCGCGGCGTAAGACGGCGGTTTCAAAGCTCCGGTCGGCTCTCACGTTCGGCATCAA
                      ____________________________________________________________
consensus             GCCGCCGCGGCGTAAGACGGCGGTTTCAAAGCTCCGGTCGGCTCTCACGTTCGGCATCAA
 
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JMSF030H20-           GAGCCCCCTCGGCGCCAGAGTGGTCGGAACCCTGTTCGGGTTCCGCCGCGGGCGCGTGCA
rJMSF002C24+          GAGCCCCCTCGGCGCCAGAGTGGTCGGAACCCTGTTCGGGTTCCGCCGCGGGCGCGTGCA
                      ____________________________________________________________
consensus             GAGCCCCCTCGGCGCCAGAGTGGTCGGAACCCTGTTCGGGTTCCGCCGCGGGCGCGTGCA
 
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JMSF030H20-           TTTCGCCTTCCAGGAAGACCCGCGCCTGGGCCCGGCCTTCCTGGTGGAGCTCGCCATGCC
rJMSF002C24+          TTTCGCCTTCCAGGAAGACCCGCGCCTGGGCCCGGCCTTCCTGGTGGAGCTCGCCATGCC
                      ____________________________________________________________
consensus             TTTCGCCTTCCAGGAAGACCCGCGCCTGGGCCCGGCCTTCCTGGTGGAGCTCGCCATGCC
 
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JMSF030H20-           CACCGGCGTTCTGGTCCGGGAAATGGCTTCCGGGCCGGTCCGAATCGCTTTGGAGTGCGA
rJMSF002C24+          CACCGGCGTTCTGGTCCGGGAAATGGCTTCCGGGCCGGTCCGAATCGCTTTGGAGTGCGA
rJMSF030H20+                                  GGCTTCCGGGCCGGTCCGAATCGCTTTGGAGTGCGA
                      ____________________________________________________________
consensus             CACCGGCGTTCTGGTCCGGGAAATGGCTTCCGGGCCGGTCCGAATCGCTTTGGAGTGCGA
 
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JMSF030H20-           GGGGAACACAAACACATGGGAGAAGAATAAGAAGAAGAAGAAGGCGAAGCTTCTAGAAGA
rJMSF002C24+          GGGGAACACAAACACATGGGAGAAGAATAAGAAGAAGAAGAAGGCGAAGCTTCTAGAAGA
rJMSF030H20+          GGGGAACACAAACACATGGGAGAAGAATAAGAAGAAGAAGAAGGCGAAGCTTCTAGAAGA
                      ____________________________________________________________
consensus             GGGGAACACAAACACATGGGAGAAGAATAAGAAGAAGAAGAAGGCGAAGCTTCTAGAAGA
 
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JMSF030H20-           GCCCGCTTGGCGGACGTACTGTAACGGGCGGAAATGCGGGTTCGCGGCGA          
rJMSF002C24+          GCCCGCTTGGCGGACGTACTGTAACGGGCGGAAATGCGGGTTCGCGGCGAGGAGAGAATG
rJMSF030H20+          GCCCGCTTGGCGGACGTACTGTAACGGGCGGAAATGCGGGTTCGCGGCGAGGAGAGAATG
                      ____________________________________________________________
consensus             GCCCGCTTGGCGGACGTACTGTAACGGGCGGAAATGCGGGTTCGCGGCGAGGAGAGAATG
 
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rJMSF002C24+          CGGGCCGGACGATTGGCGGGTGTTGAACTCCATCGGCCCGATCACAATGGGCGCCGGAGT
rJMSF030H20+          CGGGCCGGACGATTGGCGGGTGTTGAACTCCATCGGCCCGATCACAATGGGCGCCGGAGT
                      ____________________________________________________________
consensus             CGGGCCGGACGATTGGCGGGTGTTGAACTCCATCGGCCCGATCACAATGGGCGCCGGAGT
 
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rJMSF002C24+          TTTGCCCGGAAAGGAGGACGACGGGATCGGGCC-GACGGCGAGCTAATGTACATGAGGGC
rJMSF030H20+          TTTGCCCGGAAAGGAGGACGACGGGATCGGGCCGGACGGCGAGCTAATGTACATGAGGGC
                      ____________________________________________________________
consensus             TTTGCCCGGAAAGGAGGACGACGGGATCGGGCCGGACGGCGAGCTAATGTACATGAGGGC
 
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rJMSF002C24+          AAAGTATGAACGAGTTGTGGGGTCCAGAGACTCTGAAGCTTTCTACATGATGAGCCCTGA
rJMSF030H20+          AAAGTATGAACGAGTTGTGGGGTCCAGAGACTCTGAAGCTTTCTACATGATGAGCCCTGA
                      ____________________________________________________________
consensus             AAAGTATGAACGAGTTGTGGGGTCCAGAGACTCTGAAGCTTTCTACATGATGAGCCCTGA
 
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rJMSF002C24+          TGGCCATGGCGGTCCTGAGCTTAGCATCTATTTACTAAGAGCTTAATCAATTC       
rJMSF030H20+          TGGCCATGGCGGTCCTGAGCTTAGCATCTATTTACTAAGAGCTTAATCAATTCTTAGATC
                      ____________________________________________________________
consensus             TGGCCATGGCGGTCCTGAGCTTAGCATCTATTTACTAAGAGCTTAATCAATTCTTAGATC
 
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rJMSF030H20+          ATTATAATTATATATCAATCTCTGTTTTAATCACTATTTTGTTATGCTTTAAGTTCATAA
                      ____________________________________________________________
consensus             ATTATAATTATATATCAATCTCTGTTTTAATCACTATTTTGTTATGCTTTAAGTTCATAA
 
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rJMSF030H20+          ACAAATTTCTAAAACAAAAAATTCTATAAAACATAAGAGTAAGAATTAATGTTGATTATT
                      ____________________________________________________________
consensus             ACAAATTTCTAAAACAAAAAATTCTATAAAACATAAGAGTAAGAATTAATGTTGATTATT
 
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rJMSF030H20+          ATATATAACTTATAAGCAGAAATATATGATTATAGTTGTTTCAAGTATCTTATCTTTAGA
                      ____________________________________________________________
consensus             ATATATAACTTATAAGCAGAAATATATGATTATAGTTGTTTCAAGTATCTTATCTTTAGA
 
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rJMSF030H20+          TGGCATGTAGTGATCTCTCCTCTGTGTAGTGATCTCTCCTATGTGGGAGATTGAGCCTCA
                      ____________________________________________________________
consensus             TGGCATGTAGTGATCTCTCCTCTGTGTAGTGATCTCTCCTATGTGGGAGATTGAGCCTCA
 
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rJMSF030H20+          ATGAAGGCGTTATTGACTCTTTGTACTTCATTAAATTGAGAAAGTATGTTGAACAGATAC
                      ____________________________________________________________
consensus             ATGAAGGCGTTATTGACTCTTTGTACTTCATTAAATTGAGAAAGTATGTTGAACAGATAC