Contig 005711:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF028P02Sequence662009555 (3)ref|XP_004249844.1|2e-33PREDICTED: TBC1 domain family member 22B [Solanum lycopersicum] ref|XP_010312448766005711 (3)gb|KDP43912.1|1e-121hypothetical protein JCGZ_20922 [Jatropha curcas]
JMSF032F14Sequence712009555 (3)ref|XP_011091604.1|9e-86PREDICTED: GTPase-activating protein GYP1-like [Sesamum indicum] ref|XP_01109160724005711 (3)gb|KDP43912.1|3e-111hypothetical protein JCGZ_20922 [Jatropha curcas]
JMSF048G06Sequence685009555 (3)ref|XP_004249844.1|2e-59PREDICTED: TBC1 domain family member 22B [Solanum lycopersicum] ref|XP_010312448804005711 (3)gb|KDP43912.1|2e-148hypothetical protein JCGZ_20922 [Jatropha curcas]

Alignment

This contig is upended


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rJMSF048G06+          TCCGGCAGATTTCTGTTGATTGTCCCAGAACAGTGCCCGATGTTTCTTTCTTTCAGCAAT
                      ____________________________________________________________
consensus             TCCGGCAGATTTCTGTTGATTGTCCCAGAACAGTGCCCGATGTTTCTTTCTTTCAGCAAT
 
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rJMSF048G06+          CACAGGTCCAGAAATCATTGGAGCGCATACTTTACACGTGGGCCATACGGCATCCTGCCA
                      ____________________________________________________________
consensus             CACAGGTCCAGAAATCATTGGAGCGCATACTTTACACGTGGGCCATACGGCATCCTGCCA
 
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rJMSF048G06+          GTGGCTATGTACAGGGAATAAATGATCTGGCAACACCCTTTATGGTTGTTTTCTTATCGG
rJMSF032F14+                                                                  TCGG
rJMSF028P02+                        GGAATAAATGATCTGGCAACACCCTTTATGGTTGTTTTCTTATCGG
                      ____________________________________________________________
consensus             GTGGCTATGTACAGGGAATAAATGATCTGGCAACACCCTTTATGGTTGTTTTCTTATCGG
 
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rJMSF048G06+          AGTACTTAGAGGGAAGCATTGATAATTGGCAAATGGCAGATCTAGCTCCCGAAAAAATAT
rJMSF032F14+          AGTACTTAGAGGGAAGCATTGATAATTGGCAAATGGCAGATCTAGCTCCCGAAAAAATAT
rJMSF028P02+          AGTACTTAGAGGGAAGCATTGATAATTGGCAAATGGCAGATCTAGCTCCCGAAAAAATAT
                      ____________________________________________________________
consensus             AGTACTTAGAGGGAAGCATTGATAATTGGCAAATGGCAGATCTAGCTCCCGAAAAAATAT
 
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rJMSF048G06+          CTAATGTAGAAGCTGACTGCTATTGGTGCCTAACAAAGTTGCTTGATGGCATGCAAGACC
rJMSF032F14+          CTAATGTAGAAGCTGACTGCTATTGGTGCCTAACAAAGTTGCTTGATGGCATGCAAGACC
rJMSF028P02+          CTAATGTAGAAGCTGACTGCTATTGGTGCCTAACAAAGTTGCTTGATGGCATGCAAGACC
                      ____________________________________________________________
consensus             CTAATGTAGAAGCTGACTGCTATTGGTGCCTAACAAAGTTGCTTGATGGCATGCAAGACC
 
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rJMSF048G06+          ATTACACATTTGCTCAACCTGGAATTCAACGGTTGGTCTTTAAGCTAAAGGAGTTGGTTA
rJMSF032F14+          ATTACACATTTGCTCAACCTGGAATTCAACGGTTGGTCTTTAAGCTAAAGGAGTTGGTTA
rJMSF028P02+          ATTACACATTTGCTCAACCTGGAATTCAACGGTTGGTCTTTAAGCTAAAGGAGTTGGTTA
                      ____________________________________________________________
consensus             ATTACACATTTGCTCAACCTGGAATTCAACGGTTGGTCTTTAAGCTAAAGGAGTTGGTTA
 
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rJMSF048G06+          GACGGATTGATGAGCCCATCTTAAGGCACATGGAGGAGCAAGGTCTTGAATTTCTACAAT
rJMSF032F14+          GACGGATTGATGAGCCCATCTTAAGGCACATGGAGGAGCAAGGTCTTGAATTTCTACAAT
rJMSF028P02+          GACGGATTGATGAGCCCATCTTAAGGCACATGGAGGAGCAAGGTCTTGAATTTCTACAAT
                      ____________________________________________________________
consensus             GACGGATTGATGAGCCCATCTTAAGGCACATGGAGGAGCAAGGTCTTGAATTTCTACAAT
 
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rJMSF048G06+          TTGCTTTTCGCTGGTTCAATTGCCTATTAATACGTGAGATGCCGTTCCACCTAGTTAGTC
rJMSF032F14+          TTGCTTTTCGCTGGTTCAATTGCCTATTAATACGTGAGATGCCGTTCCACCTAGTTAGTC
rJMSF028P02+          TTGCTTTTCGCTGGTTCAATTGCCTATTAATACGTGAGATGCCGTTCCACCTAGTTAGTC
                      ____________________________________________________________
consensus             TTGCTTTTCGCTGGTTCAATTGCCTATTAATACGTGAGATGCCGTTCCACCTAGTTAGTC
 
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rJMSF048G06+          GCTTGTGGGACACTTATCTAGCAGAAGGTGATGCACTGCCAGATTTCCTCGTATACATTG
rJMSF032F14+          GCTTGTGGGACACTTATCTAGCAGAAGGTGATGCACTGCCAGATTTCCTCGTATACATTG
rJMSF028P02+          GCTTGTGGGACACTTATCTAGCAGAAGGTGATGCACTGCCAGATTTCCTCGTATACATTG
                      ____________________________________________________________
consensus             GCTTGTGGGACACTTATCTAGCAGAAGGTGATGCACTGCCAGATTTCCTCGTATACATTG
 
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rJMSF048G06+          CTGCTAGTTTCCTACTATCGTGGACAGAGAAGCTACAGCAGCTCGAGTTCCAAGATATGG
rJMSF032F14+          CTGCTAGTTTCCTACTATCGTGGACAGAGAAGCTACAGCAGCTCGAGTTCCAAGATATGG
rJMSF028P02+          CTGCTAGTTTCCTACTATCGTGGACAGAGAAGCTACAGCAGCTCGAGTTCCAAGATATGG
                      ____________________________________________________________
consensus             CTGCTAGTTTCCTACTATCGTGGACAGAGAAGCTACAGCAGCTCGAGTTCCAAGATATGG
 
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rJMSF048G06+          TAATGTTCCTCCAACATCTTCCAACTCACAATTGGAACGATTTGGAGCTGGAGATGGTGC
rJMSF032F14+          TAATGTTCCTCCAACATCTTCCAACTCACAATTGGAACGATTTGGAGCTGGAGATGGTGC
rJMSF028P02+          TAATGTTCCTCCAACATCTTCCAACTCACAATTGGAACGATTTGGAGCTGGAGATGGTGC
                      ____________________________________________________________
consensus             TAATGTTCCTCCAACATCTTCCAACTCACAATTGGAACGATTTGGAGCTGGAGATGGTGC
 
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rJMSF048G06+          TCTCCCGCGCTTATATGTGGCACGCCATGTTTAGTAGCTCACCCAGCCACTTACTTAGCT
rJMSF032F14+          TCTCCCGCGCTTATATGTGGCACGCCATGTTTAGTAGCTCACCCAGCCACTTACTTAGCT
rJMSF028P02+          TCTCCCGCGCTTATATGTGGCACGCCATGTTTAGTAGCTCACCCAGCCACTTACTTAGCT
                      ____________________________________________________________
consensus             TCTCCCGCGCTTATATGTGGCACGCCATGTTTAGTAGCTCACCCAGCCACTTACTTAGCT
 
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rJMSF048G06+          AAAGAAAGAATTCTATGTTTTAACAACAATGGCCAGGCTACCATTCCTGTTCTCTTTTTC
rJMSF032F14+          AAAGAAAGAATTCTATGTTTTAACAACAATGGCCAGGCTACCATTCCTGTTCTCTTTTTC
rJMSF028P02+          AAAGAAAGAATTCTATGTTTTAACAACAATGGCCAGGCTACCATTCCTGTTCTCTTTTTC
                      ____________________________________________________________
consensus             AAAGAAAGAATTCTATGTTTTAACAACAATGGCCAGGCTACCATTCCTGTTCTCTTTTTC
 
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rJMSF048G06+          CCATTAAATACAAATCTGGGATCT                                    
rJMSF032F14+          CCATTAAATACAAATCTGGGATCTTGTCTTTTCCTTGAAAGAAACCTGTGTGTTTTCTGT
rJMSF028P02+          CCATTAAATACAAATCTGGGATCTTGTCTTTTCCTTGAAAGAAACCTGTGTGTTTTCTGT
                      ____________________________________________________________
consensus             CCATTAAATACAAATCTGGGATCTTGTCTTTTCCTTGAAAGAAACCTGTGTGTTTTCTGT
 
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rJMSF032F14+          TTATTCAGTTTCTTTTTCTTTTTCTTTTTTTTTCTTCAATTTTCTTTCTACTCTGATTTT
rJMSF028P02+          TTATTCAGTTTCTTTTTCTTTTTCTTTTTTTTTCTTCAATTTTCTTTCTACTCTGATTTT
                      ____________________________________________________________
consensus             TTATTCAGTTTCTTTTTCTTTTTCTTTTTTTTTCTTCAATTTTCTTTCTACTCTGATTTT