Contig 005708:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017M18Sequence477013092 (4)ref|XP_011072400.1|2e-33PREDICTED: zinc phosphodiesterase ELAC protein 2-like [Sesamum indicum]765005708 (3)ref|XP_009776005.1|1e-91PREDICTED: zinc phosphodiesterase ELAC protein 2-like, partial [Nicotiana sylve
JMSF018C08Sequence454013092 (4)ref|XP_009608382.1|8e-13PREDICTED: zinc phosphodiesterase ELAC protein 2-like [Nicotiana tomentosiformi796005708 (3)ref|XP_009776005.1|1e-131PREDICTED: zinc phosphodiesterase ELAC protein 2-like, partial [Nicotiana sylve
JMSF028L18Sequence634013092 (4)ref|XP_011072400.1|6e-59PREDICTED: zinc phosphodiesterase ELAC protein 2-like [Sesamum indicum]788005708 (3)ref|XP_009776005.1|4e-126PREDICTED: zinc phosphodiesterase ELAC protein 2-like, partial [Nicotiana sylve

Alignment

This contig is upended


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rJMSF017M18+                                 TGAGTCACATGAAGACAACGATGTGGAAAGAGGGAAA
rJMSF018C08+                     ATTGAAGGCTTTTGAGTCACATGAAGACAACGATGTGGAAAGAGGGAAA
rJMSF028L18+                                                              GAGGGAAA
                      ____________________________________________________________
consensus                        ATTGAAGGCTTTTGAGTCACATGAAGACAACGATGTGGAAAGAGGGAAA
 
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rJMSF017M18+          GCACCTGGGCTAAAGGACCAACAGACTGATTCTAGTCTATTTGTGAAAGGGGATCGCATG
rJMSF018C08+          GCACCTGGGCTAAAGGACCAACAGACTGATTCTAGTCTATTTGTGAAAGGGGATCGCATG
rJMSF028L18+          GCACCTGGGCTAAAGGACCAACAGACTGATTNTAGTCTATTTGTGAAAGGGGATCGCATG
                      ____________________________________________________________
consensus             GCACCTGGGCTAAAGGACCAACAGACTGATTCTAGTCTATTTGTGAAAGGGGATCGCATG
 
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rJMSF017M18+          CAGAGCTATTGGAAGAGGCCAGGCAGTCCAGTTGACTCATCTGTGTTCTTCCCAATTTTG
rJMSF018C08+          CAGAGCTATTGGAAGAGGCCAGGCAGTCCAGTTGACTCATCTGTGTTCTTCCCAATTTTG
rJMSF028L18+          CAGAGCTATTGGAAGAGGCCAGGCAGTCCAGTTGACTCATCTGTGTTCTTCCCAATTTTG
                      ____________________________________________________________
consensus             CAGAGCTATTGGAAGAGGCCAGGCAGTCCAGTTGACTCATCTGTGTTCTTCCCAATTTTG
 
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rJMSF017M18+          AAGAACCTGAAGGGTGTATTAAACGAAGCAGGATTAGAAGCATTGATAAGTTTCCCTGTT
rJMSF018C08+          AAGAACCTGAAGGGTGTATTAAACGAAGCAGGATTAGAAGCATTGATAAGTTTCCCTGTT
rJMSF028L18+          AAGAACCTGAAGGGTGTATTAAACGAAGCAGGATTAGAAGCATTGATAAGTTTCCCTGTT
                      ____________________________________________________________
consensus             AAGAACCTGAAGGGTGTATTAAACGAAGCAGGATTAGAAGCATTGATAAGTTTCCCTGTT
 
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rJMSF017M18+          ATTCATTGTCCACAAGCTTATGGAGTAGCACTAAAAGCTGCTGATAGAACTAATAGTGCT
rJMSF018C08+          ATTCATTGTCCACAAGCTTATGGAGTAGCACTAAAAGCTGCTGATAGAACTAATAGTGCT
rJMSF028L18+          ATTCATTGTCCACAAGCTTATGGAGTAGCACTAAAAGCTGCTGATAGAACTAATAGTGCT
                      ____________________________________________________________
consensus             ATTCATTGTCCACAAGCTTATGGAGTAGCACTAAAAGCTGCTGATAGAACTAATAGTGCT
 
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rJMSF017M18+          GGGAAAAGGATACCGGGATGGAAGATTGTTTACTCTGGTGATACTAGGCCCTGTCCAGAT
rJMSF018C08+          GGGAAAAGGATACCGGGATGGAAGATTGTTTACTCTGGTGATACTAGGCCCTGTCCAGAT
rJMSF028L18+          GGGAAAAGGATACCGGGATGGAAGATTGTTTACTCTGGTGATACTAGGCCCTGTCCAGAT
                      ____________________________________________________________
consensus             GGGAAAAGGATACCGGGATGGAAGATTGTTTACTCTGGTGATACTAGGCCCTGTCCAGAT
 
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rJMSF017M18+          CTGGTTGAAGCTTCTCGTGGAGCAACAGTTCTCATACACGAGGCTACA-TTGAAGATGGC
rJMSF018C08+          CTGGTTGAAGCTTCTCGTGGAGCAACAGTTCTCATACACGAGGCTACATTTGAAGATGGC
rJMSF028L18+          CTGGTTGAAGCTTCTCGTGGAGCAACAGTTCTCATACACGAGGCTACATTTGAAGATGGC
                      ____________________________________________________________
consensus             CTGGTTGAAGCTTCTCGTGGAGCAACAGTTCTCATACACGAGGCTACATTTGAAGATGGC
 
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rJMSF017M18+          ATGGTGGACGAGGCAATAGCAAGAAATCACAGCACAACAAAGGAAGCTATTGAAGTGGGG
rJMSF018C08+          ATGGTGGACGAGGCAATAGCAAGAAATCACAGCACAACAAAGGAAGCTATTGAAGTGGGG
rJMSF028L18+          ATGGTGGACGAGGCAATAGCAAGAAATCACAGCACAACAAAGGAAGCTATTGAAGTGGGG
                      ____________________________________________________________
consensus             ATGGTGGACGAGGCAATAGCAAGAAATCACAGCACAACAAAGGAAGCTATTGAAGTGGGG
 
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rJMSF017M18+          GATAGCGCTGGAGCATATCGTATCATCCTTACTCACTTCAGCCAAAGATACCCTAAAATC
rJMSF018C08+          GATAGCGCTGGAGCATATCGTATCATCCTTACTCACTTCAGCCAAAGATACCCTAAAATC
rJMSF028L18+          GATAGCGCTGGAGCATATCGTATCATCCTTACTCACTTCAGCCAAAGATACCCTAAAATC
                      ____________________________________________________________
consensus             GATAGCGCTGGAGCATATCGTATCATCCTTACTCACTTCAGCCAAAGATACCCTAAAATC
 
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rJMSF017M18+          ACAGTTTTTGATGAATCCCACATGCACAAAACCTGCATTGCTTTTGATATGATGAGTATA
rJMSF018C08+          CCAGTTTTTGATGAATCCCACATGCACAAAACCTGCATTGCTTTTGATATGATGAGTATA
rJMSF028L18+          CCAGTTTTTGATGAATCCCACATGCACAAAACCTGCATTGCTTTTGATATGATGAGTATA
                      ____________________________________________________________
consensus             CCAGTTTTTGATGAATCCCACATGCACAAAACCTGCATTGCTTTTGATATGATGAGTATA
 
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rJMSF017M18+          AATGCAGCAGATCTGCCTATGCTTCCAAGAGTCCTTCCATACCTTAAGCTCC--TTTCGT
rJMSF018C08+          AATGCAGCAGATCTGCCTATGCTTCCAAGAGTCCTTCCATACCTTAAGCTCCTATTTCGT
rJMSF028L18+          AATGCAGCAGATCTGCCTATGCTTCCAAGAGTCCTTCCATACCTTAAGCTCCTATTTCGT
                      ____________________________________________________________
consensus             AATGCAGCAGATCTGCCTATGCTTCCAAGAGTCCTTCCATACCTTAAGCTCCTATTTCGT
 
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rJMSF017M18+          GATGACCTCGCGGTTGACGAATCCTTTGATGCAAATGTTACAACTGCTATTCGTGATGAG
rJMSF018C08+          GATGACCTCGCGGTTGACGAATCCTTTGATGCAAATGTTACAACTGCTATTCGTGATGAG
rJMSF028L18+          GATGACCTCGCGGTTGACGAATCCTTTGATGCAAATGTTACAACTGCTATTCGTGATGAG
                      ____________________________________________________________
consensus             GATGACCTCGCGGTTGACGAATCCTTTGATGCAAATGTTACAACTGCTATTCGTGATGAG
 
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rJMSF017M18+          CTCATGGTTGATGAATCTGATGATGCGGCAGCAGCAGCAGATGTTACAACTGTTCTTGCT
rJMSF018C08+          CTCATGGTTGATGAATCTGATGATGCGGCAGCAGCAGCAGATGTTACAACTGTTCTTGCT
rJMSF028L18+          CTCATGGTTGATGAATCTGATGATGCGGCAGCAGCAGCAGATGTTACAACTGTTCTTGCT
                      ____________________________________________________________
consensus             CTCATGGTTGATGAATCTGATGATGCGGCAGCAGCAGCAGATGTTACAACTGTTCTTGCT
 
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rJMSF018C08+          TGAAAAACACATACTACTATAAATGTA                                 
rJMSF028L18+          TGAAAAACACATACTACTATAAATGTATTAATTATTATTTTTAACTGAAGAAAACAAAAT
                      ____________________________________________________________
consensus             TGAAAAACACATACTACTATAAATGTATTAATTATTATTTTTAACTGAAGAAAACAAAAT