Contig 005704:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026C12Sequence203009389 (2)488005704 (2)dbj|BAH15074.1|2e-102cyclin D3 [Ipomoea batatas]
JMSF027J15Sequence694005704 (2)dbj|BAH15074.1|1e-113cyclin D3 [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF027J15+ TTNGACGCCAAAACCATACAGAAANNGAGCTCCT
                      ____________________________________________________________
consensus TTNGACGCCAAAACCATACAGAAANNGAGCTCCT
 
. : . : . : . : . : . :
rJMSF026C12+ GGTGACGCCGCTATCGTTTCTCGATCA
rJMSF027J15+ CGTGCTGTCCACCCTGAAATGGCGGATGAATCCGGTGACGCCGCTATCGNTTCTCGATCA
                      ____________________________________________________________
consensus CGTGCTGTCCACCCTGAAATGGCGGATGAATCCGGTGACGCCGCTATCGTTTCTCGATCA
 
. : . : . : . : . : . :
rJMSF026C12+ CATCACGCGCCGCCTCGGGCTCAAGAACCATCTCCACTGGGAATTCTTCACCAAATGCGA
rJMSF027J15+ CATCACGCGCCGCCTCGGGCTCAAGAACCATCTCCACTGGGAATTCTTCACCAAATGCGA
                      ____________________________________________________________
consensus CATCACGCGCCGCCTCGGGCTCAAGAACCATCTCCACTGGGAATTCTTCACCAAATGCGA
 
. : . : . : . : . : . :
rJMSF026C12+ AAGCCTCATTCTGTCTTTCATGCCTGATTCAAGATTCGTACGTTTTCTGCCGTCTGTGCT
rJMSF027J15+ AAGCCTCATTCTGTCTTTCATGCCTGATTCAAGATTCGTACGTTTTCTGCCGTCTGTGCT
                      ____________________________________________________________
consensus AAGCCTCATTCTGTCTTTCATGCCTGATTCAAGATTCGTACGTTTTCTGCCGTCTGTGCT
 
. : . : . : . : . : . :
rJMSF026C12+ GGCCACTGCCACCATGCTTCACGTTATTCATCAACTTGAACCCAGCAACGCAGTTGACCA
rJMSF027J15+ GGCCACTGCCACCATGCTTCACGTTATTCATCAACTTGAACCCAGCAACGCAGTTGACCA
                      ____________________________________________________________
consensus GGCCACTGCCACCATGCTTCACGTTATTCATCAACTTGAACCCAGCAACGCAGTTGACCA
 
. : . : . : . : . : . :
rJMSF026C12+ CCAAAACCAGCTTCTGGGTGTTCTCAAAATCAATAAGGAGAAAGTGAATGATTGTTACGA
rJMSF027J15+ CCAAAACCAGCTTCTGGGTGTTCTCAAAATCAATAAGGAGAAAGTGAATGATTGTTACGA
                      ____________________________________________________________
consensus CCAAAACCAGCTTCTGGGTGTTCTCAAAATCAATAAGGAGAAAGTGAATGATTGTTACGA
 
. : . : . : . : . : . :
rJMSF026C12+ GCTGATCAAAGAGGTGTCAAGCACTGCTTCAAACAAGCGGAGTTACAATCCGAGCAGCCC
rJMSF027J15+ GCTGATCAAAGAGGTGTCAAGCACTGCTTCAAACAAGCGGAGTTACAATCCGAGCAGCCC
                      ____________________________________________________________
consensus GCTGATCAAAGAGGTGTCAAGCACTGCTTCAAACAAGCGGAGTTACAATCCGAGCAGCCC
 
. : . : . : . : . : . :
rJMSF026C12+ CAGCGCGGTGGTTGACGCAGTGTTGAGCTGCGGCGAAAGCTCCAACGATTCGTGGGGATC
rJMSF027J15+ CAGCGCGGTGGTTGACGCGGTGTTGAGCTGCGGCGAAAGCTCCAACGATTCGTGGGGATC
                      ____________________________________________________________
consensus CAGCGCGGTGGTTGACGCGGTGTTGAGCTGCGGCGAAAGCTCCAACGATTCGTGGGGATC
 
. : . : . : . : . : . :
rJMSF026C12+ GGAGACGCCGGCGCCGGAGCACCGCCGGCCGCTCTACAAGAGACGGAGAGTTGAGGAGCA
rJMSF027J15+ GGAGACGCCGGCGCCGGAGCACCGCCGGCCGCTCTACAAGAGACGGAGAGTTGAGGAGCA
                      ____________________________________________________________
consensus GGAGACGCCGGCGCCGGAGCACCGCCGGCCGCTCTACAAGAGACGGAGAGTTGAGGAGCA
 
. : . : . : . : . : . :
rJMSF026C12+ GCAGATGAGGCTGCCGCCATTGATGACCAGAGTGTTCGT
rJMSF027J15+ GCAGATGAGGCTGCCGCCATTGATGACCAGAGTGTTCGTGGACGCCGTTGCCAGCCCGCG
                      ____________________________________________________________
consensus GCAGATGAGGCTGCCGCCATTGATGACCAGAGTGTTCGTGGACGCCGTTGCCAGCCCGCG
 
. : . : . : . : . : . :
rJMSF027J15+ TTAAAGCCAAAGTTTAAGCTCTCCTCAATTTTAATTTTGTTATTATATATTATTATTATG
                      ____________________________________________________________
consensus TTAAAGCCAAAGTTTAAGCTCTCCTCAATTTTAATTTTGTTATTATATATTATTATTATG
 
. : . : . : . : . : . :
rJMSF027J15+ TCGCGATGGTGATGGGCTCGGTGGTCGGAGAAAAGGAGGCGGTTGCGCCGCCGCACCGCT
                      ____________________________________________________________
consensus TCGCGATGGTGATGGGCTCGGTGGTCGGAGAAAAGGAGGCGGTTGCGCCGCCGCACCGCT