Contig 005700:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022D18Sequence650009360 (5)ref|XP_009762269.1|3e-34PREDICTED: uncharacterized protein LOC104214315 isoform X2 [Nicotiana sylvestri785005700 (2)ref|XP_009762268.1|2e-68PREDICTED: uncharacterized protein LOC104214315 isoform X1 [Nicotiana sylvestri
JMSF026J06Sequence334009360 (5)ref|XP_009593353.1|2e-07PREDICTED: uncharacterized protein At5g05190-like isoform X1 [Nicotiana tomento750005700 (2)ref|XP_009593354.1|1e-82PREDICTED: uncharacterized protein At5g05190-like isoform X2 [Nicotiana tomento

Alignment

This contig is upended


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rJMSF022D18+                                               ATCTTTAGAGTCGGGTGAATCCA
                      ____________________________________________________________
consensus                                                  ATCTTTAGAGTCGGGTGAATCCA
 
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rJMSF022D18+          GCAAAGGAGATCGGCTAAATTCCAATAAAAGCACTGAATCATTTTTTGCTGGGATTGCAA
rJMSF026J06+                                                    TTTTTGCTGGGATTGCAA
                      ____________________________________________________________
consensus             GCAAAGGAGATCGGCTAAATTCCAATAAAAGCACTGAATCATTTTTTGCTGGGATTGCAA
 
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rJMSF022D18+          AGAGAAGCTTTAAATCCAAGCATGTTGTTGGTGAGGAAAGGAGCAATGTTACAGTGAATG
rJMSF026J06+          AGAGAAGCTTTAAATCCAAGCATGTTGTTGGTGAGGAAAGGAGCAATGTTACAGTGAATG
                      ____________________________________________________________
consensus             AGAGAAGCTTTAAATCCAAGCATGTTGTTGGTGAGGAAAGGAGCAATGTTACAGTGAATG
 
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rJMSF022D18+          GGCATCTTATACCGGACCAGCTTTTTAAAAAAGCTGAAAGGGTAGCTGG--AAATAAACC
rJMSF026J06+          GGCATCTTATACCGGACCAGCTTTTTAAAAAAGCTGAAAGGGTAGCTGGAAAAATAAACC
                      ____________________________________________________________
consensus             GGCATCTTATACCGGACCAGCTTTTTAAAAAAGCTGAAAGGGTAGCTGGAAAAATAAACC
 
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rJMSF022D18+          CTGGACATTACTGGTATGACTTCCGAGCTGGATTTTGGGGAGTGATGGGAGGTCCTTGCC
rJMSF026J06+          CTGGACATTACTGGTATGACTTCCGAGCTGGATTTTGGGGAGTGATGGGAGGTCCTTGCC
                      ____________________________________________________________
consensus             CTGGACATTACTGGTATGACTTCCGAGCTGGATTTTGGGGAGTGATGGGAGGTCCTTGCC
 
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rJMSF022D18+          TGGGCATAGTTCCGCCATTTATTGAAGAATTTAACTATCCCATGCCTGAAAATTGTGCTG
rJMSF026J06+          TGGGCATAGTTCCGCCATTTATTGAAGAATTTAACTATCCCATGCCTGAAAATTGTGCTG
                      ____________________________________________________________
consensus             TGGGCATAGTTCCGCCATTTATTGAAGAATTTAACTATCCCATGCCTGAAAATTGTGCTG
 
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rJMSF022D18+          GTGGAAACACTGGTGTGTTTGTGAATGGGAGAGAGCTTCATAACAAAGATCTGCAATTAC
rJMSF026J06+          GTGGAAACACTGGTGTGTTTGTGAATGGGAGAGAGCTTCATAACAAAGATCTGCAATTAC
                      ____________________________________________________________
consensus             GTGGAAACACTGGTGTGTTTGTGAATGGGAGAGAGCTTCATAACAAAGATCTGCAATTAC
 
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rJMSF022D18+          TATGCAGCAGAGGGCTCTCATCTGAGAGAGATAGATCTTATATCGTTGAAATTTCGGGCA
rJMSF026J06+          TATGCAGCAGAGGGCTCTCATCTGAGAGAGATAGATCTTATATCGTTGAAATTTCGGGCA
                      ____________________________________________________________
consensus             TATGCAGCAGAGGGCTCTCATCTGAGAGAGATAGATCTTATATCGTTGAAATTTCGGGCA
 
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rJMSF022D18+          GAGTCCTTGACGAGGATACTGGTGAAGAGCTAGAGAGCCTGGGCAAACTCGCTCCAACAG
rJMSF026J06+          GAGTCCTTGACGAGGATACTGGTGAAGAGCTAGAGAGCCTGGGCAAACTCGCTCCAACAG
                      ____________________________________________________________
consensus             GAGTCCTTGACGAGGATACTGGTGAAGAGCTAGAGAGCCTGGGCAAACTCGCTCCAACAG
 
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rJMSF022D18+          TTGAGAGAATGAAGCGAGGATTTGGCATGAAAGTTCCAAAGAGAGCAGCATGATTATGTC
rJMSF026J06+          TTGAGAGAATGAAGCGAGGATTTGGCATGAAAGTTCCAAAGAGAGCAGCATGATTATGTC
                      ____________________________________________________________
consensus             TTGAGAGAATGAAGCGAGGATTTGGCATGAAAGTTCCAAAGAGAGCAGCATGATTATGTC
 
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rJMSF022D18+          TATGCAGAAACAACGTTGATGTTTCATTGTTCTACAGAAGATCTTGTCGTCTTGGTCCAT
rJMSF026J06+          TATGCAGAAACAACGTTGATGTTTCATTGTTCTACAGAAGATCTTGTCGTCTTGGTCCAT
                      ____________________________________________________________
consensus             TATGCAGAAACAACGTTGATGTTTCATTGTTCTACAGAAGATCTTGTCGTCTTGGTCCAT
 
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rJMSF022D18+          AAATCTTGCAGGCCTAAAATGGAATGGGGAATCTATATGAGCTTTGAGTCTAGCATGGCA
rJMSF026J06+          AAATCTTGCAGGCCTAAAATGGAATGGGGAATCTATATGAGCTTTGAGTCTAGCATGGCA
                      ____________________________________________________________
consensus             AAATCTTGCAGGCCTAAAATGGAATGGGGAATCTATATGAGCTTTGAGTCTAGCATGGCA
 
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rJMSF022D18+          TCATATATGTAAAATCTAGCTTGCTTTGGTTGTACCTAATCTGCATTTTAGTGGTACATA
rJMSF026J06+          TCATATATGTAAAATCTAGCTTGCTTTGGTTGTACCTAATCTGCATTTTAGTGGTACATA
                      ____________________________________________________________
consensus             TCATATATGTAAAATCTAGCTTGCTTTGGTTGTACCTAATCTGCATTTTAGTGGTACATA
 
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rJMSF022D18+          TAATAGTGATTCATGTGCTTGCTGCACCCTCTATGGCAGACATT                
rJMSF026J06+          TAATAGTGATTCATGTGCTTGCTGCACCCTCTATGGCAGACATTTCCCATTGTGATTCTT
                      ____________________________________________________________
consensus             TAATAGTGATTCATGTGCTTGCTGCACCCTCTATGGCAGACATTTCCCATTGTGATTCTT