Contig 005682:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043G17Sequence635004634 (2)ref|XP_006338902.1|1e-102PREDICTED: coatomer subunit delta-like isoform X1 [Solanum tuberosum] ref|XP_006610005682 (3)ref|XP_004230447.1|5e-59PREDICTED: coatomer subunit delta-like [Solanum lycopersicum] ref|XP_010314473.1
JMSF022O10Sequence644004634 (2)ref|XP_006338902.1|8e-111PREDICTED: coatomer subunit delta-like isoform X1 [Solanum tuberosum] ref|XP_006723005682 (3)ref|XP_004230447.1|1e-49PREDICTED: coatomer subunit delta-like [Solanum lycopersicum] ref|XP_010314473.1
JMSF024O07Sequence656006060 (2)ref|XP_006338902.1|1e-106PREDICTED: coatomer subunit delta-like isoform X1 [Solanum tuberosum] ref|XP_006744005682 (3)ref|XP_006349321.1|2e-108PREDICTED: coatomer subunit delta-like isoform X1 [Solanum tuberosum] ref|XP_006

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF024O07+ ANG
                      ____________________________________________________________
consensus ANG
 
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rJMSF024O07+ GAGTTGTTTGCAAATGAAAATATTCTAGGCCTCAAAGATCCAAATAGGCCATTTCCCACT
                      ____________________________________________________________
consensus GAGTTGTTTGCAAATGAAAATATTCTAGGCCTCAAAGATCCAAATAGGCCATTTCCCACT
 
. : . : . : . : . : . :
rJMSF024O07+ GGTCAATCTGGTGATGGTGTTGGTCTCTTGAAGTGGAGAATGCAAAGCACTGATGAGTCA
                      ____________________________________________________________
consensus GGTCAATCTGGTGATGGTGTTGGTCTCTTGAAGTGGAGAATGCAAAGCACTGATGAGTCA
 
. : . : . : . : . : . :
rJMSF024O07+ ATTTTGCCATTGACACTTAACTGCTGGCCCTCTGCTTCTGGAAAAGAAACCTATGTCAAT
                      ____________________________________________________________
consensus ATTTTGCCATTGACACTTAACTGCTGGCCCTCTGCTTCTGGAAAAGAAACCTATGTCAAT
 
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rJMSF024O07+ ATTGAGTATGAAACTCCAGCAAACATGCAACTACAGAATGTTATAATTTCTGTGCCTCTT
rJMFF043G17+ TTGAGTATGAAACTCCAGCAAACATGNATCTTCAGAATGTNATAGTTTCTGTGCCTCTC
rJMSF022O10+ CTC
                      ____________________________________________________________
consensus ATTGAGTATGAAACTCCAGCAAACATGCATCTTCAGAATGTTATAGTTTCTGTGCCTCTC
 
. : . : . : . : . : . :
rJMSF024O07+ CCAGCACTTAGAGATGCTCCAAATGTACAGCAGATAGACGGGGAGTGGAGGTTTGACTCC
rJMFF043G17+ CCAGCTCTCAGAGAGGCCCCAAACGTACAGCAGATTGATGGGGATNGGAGGTATGATTCC
rJMSF022O10+ CCAGCTCTCAGAGAGGCCCCAAACGTACAGCAGATTGATGGGGATTGGAGGTATGATTCC
                      ____________________________________________________________
consensus CCAGCTCTCAGAGAGGCCCCAAACGTACAGCAGATTGATGGGGATTGGAGGTATGATTCC
 
. : . : . : . : . : . :
rJMSF024O07+ AGGAATTGTGTCCTGGAATGGTCTATAGTTCTCATTGATAACTCAAATCGCAGTGGTTCT
rJMFF043G17+ AGAAATTCTGTTCTGGAATGGTCTATAGATCTCATCGATGCCTCAAATCGCAGTGGATCT
rJMSF022O10+ AGAAATTCTGTTCTGGAATGGTCTATAGATCTCATCGATGCCTCAAATCGCAGTGGATCT
                      ____________________________________________________________
consensus AGAAATTCTGTTCTGGAATGGTCTATAGATCTCATCGATGCCTCAAATCGCAGTGGATCT
 
. : . : . : . : . : . :
rJMSF024O07+ CTAGAATTTGTTGTTCCTGCAGCAGACCCATCACAGTTTTTCCCAATAAGTGCACGCTTT
rJMFF043G17+ CTAGAATTTGTTGTTCCTGCAGCTGATCCATCATCCTTTTTCCCAATATCTGCCCGTTTC
rJMSF022O10+ CTAGAATTTGTTGTTCCTGCAGCTGATCCATCATCCTTTTTCCCAATATCTGCCCGTTTC
                      ____________________________________________________________
consensus CTAGAATTTGTTGTTCCTGCAGCTGATCCATCATCCTTTTTCCCAATATCTGCCCGTTTC
 
. : . : . : . : . : . :
rJMSF024O07+ ACTTCTTCAAGAACTTTTAGCGACTTGAAGGTTGTCAATATTCTTCCGCTGAGAGGTGGG
rJMFF043G17+ ACCTCTTCAAAAACTTTCAGCGACTTGAAGGTTACCAACATTTTGCCGCTGAGAGGTGGG
rJMSF022O10+ ACCTCTTCAAAAACTTTCAGCGACTTGAAGGTTACCAACATTTTGCCGCTGAGAGGTGGG
                      ____________________________________________________________
consensus ACCTCTTCAAAAACTTTCAGCGACTTGAAGGTTACCAACATTTTGCCGCTGAGAGGTGGG
 
. : . : . : . : . : . :
rJMSF024O07+ GCGACACCAAAATTTGCGCAAAGAACTC
rJMFF043G17+ GCCACACCCAAATTCTCTCAAAGAACTCAGCTGGTTACTGAGAACTACCAAGTGGTCTGA
rJMSF022O10+ GCCACACCCAAATTCTCTCAAAGAACTCAGCTGGTTACTGAGAACTACCAAGTGGTCTGA
                      ____________________________________________________________
consensus GCCACACCCAAATTCTCTCAAAGAACTCAGCTGGTTACTGAGAACTACCAAGTGGTCTGA
 
. : . : . : . : . : . :
rJMFF043G17+ CAATACTCAAACAGAAAGATGTGTAGCAATTAGAAATTGTTCAGTGTTTGAAATGCAAAA
rJMSF022O10+ CAATACTCAAACAGAAAGATGTGTAGCAATTAGAAATTGTTCAGTGTTTGAAATGCAAAA
                      ____________________________________________________________
consensus CAATACTCAAACAGAAAGATGTGTAGCAATTAGAAATTGTTCAGTGTTTGAAATGCAAAA
 
. : . : . : . : . : . :
rJMFF043G17+ AAAGTTCATCCTCTTTAACCGTTTTGTTTACCAGTGTGGAATTTCAAGACTGAGTACTGC
rJMSF022O10+ AAAGTTCATCCTCTTTAACCGTTTTGTTTACCAGTGTGGAATTTCAAGACTGAGTACTGC
                      ____________________________________________________________
consensus AAAGTTCATCCTCTTTAACCGTTTTGTTTACCAGTGTGGAATTTCAAGACTGAGTACTGC
 
. : . : . : . : . : . :
rJMFF043G17+ ATGTATATGGTGGATGGTGTTGGACATGTTCTAAAATGTGCACTAATGTTGTACTCTAAT
rJMSF022O10+ ATGTATATGGTGGATGGTGTTGGACATGTTCTAAAATGTGCACTAATGTTGTACTCTAAT
                      ____________________________________________________________
consensus ATGTATATGGTGGATGGTGTTGGACATGTTCTAAAATGTGCACTAATGTTGTACTCTAAT
 
. : . : . : . : . : . :
rJMFF043G17+ TTCTTTAGTCGCGGTTTTCCTCCTTGAACAAC
rJMSF022O10+ TTCTTTAGTCGCGGTTTTCCTCCTTGAACAACAGATTATTATATGAAGAGGTTGTGTGTT
                      ____________________________________________________________
consensus TTCTTTAGTCGCGGTTTTCCTCCTTGAACAACAGATTATTATATGAAGAGGTTGTGTGTT
 
. : . : . : . : . : . :
rJMSF022O10+ TTTCTCTATAAATGCTTTACATTCTAATGCACTGTAATATGCCAATCCTTATACTATGGA
                      ____________________________________________________________
consensus TTTCTCTATAAATGCTTTACATTCTAATGCACTGTAATATGCCAATCCTTATACTATGGA
 
. : . : . : . : . : . :
rJMSF022O10+ TCCCAGTTTATAGTGCACTGTGGATCCTGGTACATGTGGATGTGTTTTATTTTGTGAGTT
                      ____________________________________________________________
consensus TCCCAGTTTATAGTGCACTGTGGATCCTGGTACATGTGGATGTGTTTTATTTTGTGAGTT
 
. : . : . : . : . : . :
rJMSF022O10+ TTCGTGTCTTTTGTTGTTAAATTATGTACTTTAAGTGTATGAATTCTGACCAAAACAAAT
                      ____________________________________________________________
consensus TTCGTGTCTTTTGTTGTTAAATTATGTACTTTAAGTGTATGAATTCTGACCAAAACAAAT