Contig 005671:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039H07Sequence512011597 (3)692005671 (4)emb|CDP15187.1|3e-30unnamed protein product [Coffea canephora]
JMSF012A04Sequence266011597 (3)743005671 (4)ref|XP_009593728.1|2e-48PREDICTED: probable receptor-like protein kinase At5g18500 [Nicotiana tomentosi
JMSF021G10Sequence593005671 (4)emb|CDP15187.1|1e-10unnamed protein product [Coffea canephora]
JMSF036K02Sequence633011597 (3)ref|XP_011039031.1|8e-28PREDICTED: probable receptor-like protein kinase At5g18500 [Populus euphratica]732005671 (4)ref|XP_009593728.1|2e-48PREDICTED: probable receptor-like protein kinase At5g18500 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF036K02+ ACGCAAATACTGGCCTCTTGAATGAAAAGAGCGATGTTTATAGCTT
                      ____________________________________________________________
consensus ACGCAAATACTGGCCTCTTGAATGAAAAGAGCGATGTTTATAGCTT
 
. : . : . : . : . : . :
rJMSF036K02+ NGGGGTTGTGCTTTAGAAGCAATCACCGGAAGAGACCCCGTGGACTATGGCCGTCCTGCT
rJMSF012A04+ TTAGAAGCAATCACCGGAAGAGACCCCGTGGACTATGGCCGTCCTGCT
                      ____________________________________________________________
consensus NGGGGTTGTGCTTTAGAAGCAATCACCGGAAGAGACCCCGTGGACTATGGCCGTCCTGCT
 
. : . : . : . : . : . :
rJMSF036K02+ CAAGAGGTGAATCTTGTTGATTGGTTGAAAATGATGGTTGGAAACAGGCGCTCAGAGGAA
rJMSF012A04+ CAAGAGGTGAATCTTGTTGATTGGTTGAAAATGATGGTTGGAAACAGGCGCTCAGAGGAA
rJMFF039H07+ TGAAAATGATGGTTGGAAACAGGCGCTCAGAGGAA
                      ____________________________________________________________
consensus CAAGAGGTGAATCTTGTTGATTGGTTGAAAATGATGGTTGGAAACAGGCGCTCAGAGGAA
 
. : . : . : . : . : . :
rJMSF036K02+ GTAGTGGATCCAAATATTGGGTCAAGGCCATCAACCAGAGCTCTTAAGCGAGCCCTTTTG
rJMSF012A04+ GTAGTGGATCCAAATATTGGGTCAAGGCCATCAACCAGAGCTCTTAAGCGAGCCCTTTTG
rJMFF039H07+ GTAGTGGATCCAAATATTGGGTCAAGGCCATCAACCAGAGCTCTTAAGCGAGCCCTTTTG
                      ____________________________________________________________
consensus GTAGTGGATCCAAATATTGGGTCAAGGCCATCAACCAGAGCTCTTAAGCGAGCCCTTTTG
 
. : . : . : . : . : . :
rJMSF036K02+ ACCGCTTTGAGATGCGTTGATCCAGATTCTGAGAAGAGACCCAAGATGAGCCAAGTTGCC
rJMSF012A04+ ACCGCTTTGAGATGCGTTGATCCAGATTCTGAGAAGAGACCCAAGATGAGCCAAGTTGCC
rJMFF039H07+ ACCGCTTTGAGATGCGTTGATCCAGATTCTGAGAAGAGACCCAAGATGAGCCAAGTTGCC
rJMSF021G10+ TGAGATGCGTTGATCCAGATTCTGAGAAGAGACCCANGATGAGCCAAGTTGCC
                      ____________________________________________________________
consensus ACCGCTTTGAGATGCGTTGATCCAGATTCTGAGAAGAGACCCAAGATGAGCCAAGTTGCC
 
. : . : . : . : . : . :
rJMSF036K02+ CGCATGCTCGAATCTGAGGAATATCCCATACCAAGAGAGGACCGAAGGCAGCGAAGAATC
rJMSF012A04+ CGCATGCTCGAATCTGAGGAATATCCCATACCAAGAGAGGACCGAAGGCAGCGAAGAATC
rJMFF039H07+ CGCATGCTCGAATCTGAGGAATATCCCATACCAAGAGAGGACCGAAGGCAGCGAAGAATC
rJMSF021G10+ CGCATNCTCGAATCTGAGGAATATCCCATNCCAAGAGAGGACCGAAGGCAGCGAAGAATC
                      ____________________________________________________________
consensus CGCATGCTCGAATCTGAGGAATATCCCATACCAAGAGAGGACCGAAGGCAGCGAAGAATC
 
. : . : . : . : . : . :
rJMSF036K02+ CGAGCAGGTGGTGGCACAGAGAGCGAATCCCAGCACGAGAACTATGATACGGACAAGAGT
rJMSF012A04+ CGAGCAGGTGGTGGCACAGAGAGCGAATCCCAGCACGAGAACTATGATACGGACAAGAGT
rJMFF039H07+ CGAGCAGGTGGTGGCACAGAGAGCGAATCCCAGCACGAGAACTATGATACGGACAAGAGT
rJMSF021G10+ CGAGCAGGTGGTGGCACAGAGAGCGAATCCCAGCACGAGAACTATGATACGGACAAGAGT
                      ____________________________________________________________
consensus CGAGCAGGTGGTGGCACAGAGAGCGAATCCCAGCACGAGAACTATGATACGGACAAGAGT
 
. : . : . : . : . : . :
rJMSF036K02+ GACAACCCAGATTCGAGATCGGAAAGTAAAAGGAGCGATAACGTGTGACCAGCAAGCAGT
rJMSF012A04+ GACAACCCAGATTCGAGATCGGAAAGTAAAAGGAGCGATAACGTGTGACCAGCAAGCAGT
rJMFF039H07+ GACAACCCAGATTCGAGATCGGAAAGTAAAAGGAGCGATAACGTGTGACCAGCAAGCAGT
rJMSF021G10+ GACAACCCAGATTCGAGATCGGAAAGTAAAAGGAGCGATAACGTGTGACCAGCAAGCAGN
                      ____________________________________________________________
consensus GACAACCCAGATTCGAGATCGGAAAGTAAAAGGAGCGATAACGTGTGACCAGCAAGCAGT
 
. : . : . : . : . : . :
rJMSF036K02+ GGCTCCACCGATATGACAGCAGGCTAAGCTAGTTCTTACAAAACTCGAGATAATGTGTGA
rJMSF012A04+ GGCTCCACCGATATGACAGCAGGCTAAGCTAGTTCTTACAAAACTCGAGATAATGTGTGA
rJMFF039H07+ GGCTCCACCGATATGACAGCAGGCTAAGCTAGTTCTTACAAAACTCGAGATAATGTGTGA
rJMSF021G10+ GGCTCCNCCGATATGNCAGCAGGNTAAGCTAGTTCTTNCAAAACTCGAGATAATGTGTGA
                      ____________________________________________________________
consensus GGCTCCACCGATATGACAGCAGGCTAAGCTAGTTCTTACAAAACTCGAGATAATGTGTGA
 
. : . : . : . : . : . :
rJMSF036K02+ TTTATTTGGGTAAGGTGATATTTACTAGTTAAAGTTGGGACTAAGGTTGGGAGTATATGA
rJMSF012A04+ TTTATTTGGGTAAGGTGATATTTACTAGTTAAAGTTGGGACTAAGGTTGGGAGTATATGA
rJMFF039H07+ TTTATTTGGGTAAGGTGATATTTACTAGTTAAAGTTGGGACTAAGGTTGGGAGTATATGA
rJMSF021G10+ TTTATTTGGGTAAGGTGATATTTACTAGNTAAAGTTGGGACTANGGTTGGGAGTATATGA
                      ____________________________________________________________
consensus TTTATTTGGGTAAGGTGATATTTACTAGTTAAAGTTGGGACTAAGGTTGGGAGTATATGA
 
. : . : . : . : . : . :
rJMSF036K02+ AGATATCAGAGATTGGTGAGACATAGACAGGCTCTTAGTTTCACTTTTTCTAAGTTGGTT
rJMSF012A04+ AGATATCAGAGATTGGTGAGACATAGACAGGCTCTTAGTTTCACTTTTTCTAAGTTGGTT
rJMFF039H07+ AGATATCAGAGATTGGTGAGACATAGACAGGCTCTTAGTTTCACTTTTTCTAAGTTGGTT
rJMSF021G10+ AGATATCAGAGATTGGTGNGACATAGACAGGCTNTTAGTTNCACTTTTTNNANGTTGGTT
                      ____________________________________________________________
consensus AGATATCAGAGATTGGTGAGACATAGACAGGCTCTTAGTTTCACTTTTTCTAAGTTGGTT
 
. : . : . : . : . : . :
rJMSF036K02+ TTTGTTTTGTTTTCTAAGAGATTGGAAATGCCTTTTGTTGTTTGAAAATAGATAGGAATA
rJMSF012A04+ TTTGTTTTGTTTTCTAAGAGATTGGAAATGCCTTTTGTTGTTTGAAAATAGATAGGAATA
rJMFF039H07+ TTTGTTTTGTTTTCTAAGAGATTGGAAATGCCTTTTGTTGTTTGAAAATAGATAGGAATA
rJMSF021G10+ TTTGTTTTGTNTTCTAAGAGATNGGAAANNCCTTTTGTNGTNTGAAAATAGATAGGAATN
                      ____________________________________________________________
consensus TTTGTTTTGTTTTCTAAGAGATTGGAAATGCCTTTTGTTGTTTGAAAATAGATAGGAATA
 
. : . : . : . : . : . :
rJMSF036K02+ TGTTTGATTGTGTACAGGAGAAT
rJMSF012A04+ TGTTTGATTGTGTACAGGAGAATTGCCTTAATCTGTTGTA-TTCCATGGTCATGGTTTCT
rJMFF039H07+ TGTTTGATTGTGTACAGGAGAATTGCCTTAATCTGTTGTA-TTCCATGGTCATGGTTTCT
rJMSF021G10+ TGTTTGATNGTGTACAGGAGAATTGCCCTNATCNNTTGNACTTCCCTGGTCATGGTTTCT
                      ____________________________________________________________
consensus TGTTTGATTGTGTACAGGAGAATTGCCTTAATCTGTTGTA-TTCCATGGTCATGGTTTCT
 
. : . : . : . : . : . :
rJMSF012A04+ GACAATTTTGTTTTCCAACATCCT
rJMFF039H07+ GACAATTTTGTTTTCCAACATCCTTAAAAGCATTGCTTTTAATATCT
rJMSF021G10+ GACAATTTTNCTTTCCAACATCCTNAAAAGCATTGCTTTTAANATCTNNGTACACATCCC
                      ____________________________________________________________
consensus GACAATTTTGTTTTCCAACATCCTTAAAAGCATTGCTTTTAATATCTNNGTACACATCCC