Contig 005670:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020I11Sequence476009308 (2)ref|XP_009798569.1|4e-35PREDICTED: mortality factor 4-like protein 1 isoform X4 [Nicotiana sylvestris]754005670 (3)ref|XP_009798546.1|5e-55PREDICTED: nuA4 complex subunit EAF3 homolog isoform X1 [Nicotiana sylvestris]
JMFF020I12Sequence386005670 (3)ref|XP_009588510.1|3e-42PREDICTED: mortality factor 4-like protein 1 isoform X3 [Nicotiana tomentosifor
JMSF021E15Sequence663009308 (2)ref|XP_009798562.1|4e-66PREDICTED: mortality factor 4-like protein 1 isoform X3 [Nicotiana sylvestris]813005670 (3)ref|XP_009798562.1|4e-80PREDICTED: mortality factor 4-like protein 1 isoform X3 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF020I11+ ACACCAGAGAAAGACAATGCGTCCGCTGAGAAGCTCATCAA
rJMSF021E15+ GAGAAAGACAATGCGTCCGCTGAGAAGCTCATCAA
                      ____________________________________________________________
consensus ACACCAGAGAAAGACAATGCGTCCGCTGAGAAGCTCATCAA
 
. : . : . : . : . : . :
rJMFF020I11+ GATTTCAAATTCCATTAACTTTAAAGAAGCAACTTGTTGATGATTGGGAGTTCATCACTC
rJMSF021E15+ GA-TTCAAATTCCATTAACTTTAAAGAAGCAACTTGTTGATGATTGGGAGTTCATCACTC
                      ____________________________________________________________
consensus GATTTCAAATTCCATTAACTTTAAAGAAGCAACTTGTTGATGATTGGGAGTTCATCACTC
 
. : . : . : . : . : . :
rJMFF020I11+ AGCAGAATATGCTTGTAAAACTTCCACGATNCTCCCAGTGTTGATGATATACTGACGAAT
rJMSF021E15+ AGCAGAATATGCTTGTAAAACTTCCACGAT-CTCCCAGTGTTGATGATATACTGACGAAT
                      ____________________________________________________________
consensus AGCAGAATATGCTTGTAAAACTTCCACGATNCTCCCAGTGTTGATGATATACTGACGAAT
 
. : . : . : . : . : . :
rJMFF020I11+ TACCTTGAACACTGCTCAAAAAAGGATGGCATGATGGCTGAATCAGTTGGAGAAATTCTC
rJMFF020I12+ CTCAAAAAAGGATGGCATGATGGCTGAATCAGTTGGAGAAATTCTC
rJMSF021E15+ TACCTTGAACACTGCTCAAAAAAGGATGGCATGATGGCTGAATCAGTTGGAGAAATTCTC
                      ____________________________________________________________
consensus TACCTTGAACACTGCTCAAAAAAGGATGGCATGATGGCTGAATCAGTTGGAGAAATTCTC
 
. : . : . : . : . : . :
rJMFF020I11+ AATGGCATAAGATCGTATTTTGACAAATCATTGCCAGTTATACTTTTGTACAAAAAGGAG
rJMFF020I12+ AATGGCATAAGATCGTATTTTGACAAATCATTGCCAGTTATACTTTTGTACAAAAAGGAG
rJMSF021E15+ AATGGCATAAGATCGTATTTTGACAAATCATTGCCAGTTATACTTTTGTACAAAAAGGAG
                      ____________________________________________________________
consensus AATGGCATAAGATCGTATTTTGACAAATCATTGCCAGTTATACTTTTGTACAAAAAGGAG
 
. : . : . : . : . : . :
rJMFF020I11+ CGCCAACAATATCATGACACAGTTTCAGATAATGTCTCTCCGTCTAGTGTATATGGAGCT
rJMFF020I12+ CGCCAACAATATCATGACACAGTTTCAGATAATGTCTCTCCGTCTAGTGTATATGGAGCT
rJMSF021E15+ CGCCAACAATATCATGACACAGTTTCAGATAATGTCTCTCCGTCTAGTGTATATGGAGCT
                      ____________________________________________________________
consensus CGCCAACAATATCATGACACAGTTTCAGATAATGTCTCTCCGTCTAGTGTATATGGAGCT
 
. : . : . : . : . : . :
rJMFF020I11+ GAACATCTGTTGCGCCTATTTGTCAAGTTGCCTGAGCTACTGGCTTGTGTGAAAATTGAA
rJMFF020I12+ GAACATCTGTTGCGCCTATTTGTCAAGTTGCCTGAGNTACTGGCTTGTGTGAAAATTGAA
rJMSF021E15+ GAACATCTGTTGCGCCTATTTGTCAAGTTGCCTGAGCTACTGGCTTGTGTGAAAATTGAA
                      ____________________________________________________________
consensus GAACATCTGTTGCGCCTATTTGTCAAGTTGCCTGAGCTACTGGCTTGTGTGAAAATTGAA
 
. : . : . : . : . : . :
rJMFF020I11+ GAGGAGACATTAACTAGTTTGCAGCAGAAATTGCTGGATTTCCTCAAATTTCTGCAGAAA
rJMFF020I12+ GAGGAGACATTNANTAGTTTGCAGCAGAAATTGCTGGATTTCCTCAAATTTCNGCAGAAA
rJMSF021E15+ GAGGAGACATTAACTAGTTTGCAGCAGAAATTGCTGGATTTCCTCAAATTTCTGCAGAAA
                      ____________________________________________________________
consensus GAGGAGACATTAACTAGTTTGCAGCAGAAATTGCTGGATTTCCTCAAATTTCTGCAGAAA
 
. : . : . : . : . : . :
rJMFF020I11+ AATCAGGGCACGTACTTCCTTTCTTCTTACGAAGCATCAAAAGCTTCTGACGGAAGCAGC
rJMFF020I12+ AATCAGGG
rJMSF021E15+ AATCAGGGCACGTACTTCCTTTCTTCTTACGAAGCATCAAAAGCTTCTGACGGAAGCAGC
                      ____________________________________________________________
consensus AATCAGGGCACGTACTTCCTTTCTTCTTACGAAGCATCAAAAGCTTCTGACGGAAGCAGC
 
. : . : . : . : . : . :
rJMFF020I11+ AAGGCGAAAGATAGTTGACCAGCGAACCGTTCTTCTGTGCCTAATGTGACTTAGTTTCAG
rJMSF021E15+ AAGGCGAAAGATAGTTGACCAGCGAACCGTTCTTCTGTGCCTAATGTGACTTAGTTTCAG
                      ____________________________________________________________
consensus AAGGCGAAAGATAGTTGACCAGCGAACCGTTCTTCTGTGCCTAATGTGACTTAGTTTCAG
 
. : . : . : . : . : . :
rJMFF020I11+ CAACTTTCACTAG
rJMSF021E15+ CAACTTTCACTAGGTATTTGACTTACCATGTCTTTACTAATATTAATAGCTGACGTCAAA
                      ____________________________________________________________
consensus CAACTTTCACTAGGTATTTGACTTACCATGTCTTTACTAATATTAATAGCTGACGTCAAA
 
. : . : . : . : . : . :
rJMSF021E15+ AACAACCCAATCCCCATTTGTAGTTTTGTGTTGTCGCTTTGGTCCTAGATTTCGCACGAG
                      ____________________________________________________________
consensus AACAACCCAATCCCCATTTGTAGTTTTGTGTTGTCGCTTTGGTCCTAGATTTCGCACGAG
 
. : . : . : . : . : . :
rJMSF021E15+ ATGACTAGATCAGTGTTTGGAGAGAAAGGTACAATCCTTCTTTAGTGTAACAATTAGCTT
                      ____________________________________________________________
consensus ATGACTAGATCAGTGTTTGGAGAGAAAGGTACAATCCTTCTTTAGTGTAACAATTAGCTT
 
. : . : . : . : . : . :
rJMSF021E15+ AGTAAANGATGTAGTCTTTGTTGTAGCTGATGATTCTTAGTGTCCATGTTGTACCAAATA
                      ____________________________________________________________
consensus AGTAAANGATGTAGTCTTTGTTGTAGCTGATGATTCTTAGTGTCCATGTTGTACCAAATA