Contig 005664:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012D04Sequence336005007 (3)206005664 (2)ref|XP_010325811.1|1e-17PREDICTED: mRNA-capping enzyme-like isoform X5 [Solanum lycopersicum]
JMSF019D16Sequence490005007 (3)651005664 (2)ref|XP_010325812.1|6e-66PREDICTED: mRNA-capping enzyme-like isoform X6 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF012D04+ CTNTGTTTTTTAACTTCTGTAACAGGGTTGGGATGATCCTTACGTT
                      ____________________________________________________________
consensus CTNTGTTTTTTAACTTCTGTAACAGGGTTGGGATGATCCTTACGTT
 
. : . : . : . : . : . :
rJMSF012D04+ ACGAGGACCCATGNGGCCCTCNTGAAGTGGAAATACCCANAGATGAACTCNGTNGANCTC
rJMSF019D16+ CCTCTTGAAGTGGAAATACCCAGAGATGAACTCTGTTGATTTC
                      ____________________________________________________________
consensus ACGAGGACCCATGNGGCCCTCTTGAAGTGGAAATACCCAGAGATGAACTCTGTTGATTTC
 
. : . : . : . : . : . :
rJMSF012D04+ CTCTTNGNGGTGCNTNATGATCGAGAGNTACTNTNTNTNAATGNCCGAGGAAAGAAGAAA
rJMSF019D16+ CTCTTTGAGGTGCTTGATGATCGAGAGCTACTTTATCTAAATGAACGAGGAAAGAAGAAA
                      ____________________________________________________________
consensus CTCTTTGAGGTGCTTGATGATCGAGAGCTACTTTATCTAAATGACCGAGGAAAGAAGAAA
 
. : . : . : . : . : . :
rJMSF012D04+ NTGATGGATGGGAGCAGGGTCATATTCCCAGCTTCTTATG
rJMSF019D16+ CTGATGGATGGGAGCAGGGTCATATTCCCAGATTCTTATGATCCATCAGAGCTCTCGGGT
                      ____________________________________________________________
consensus CTGATGGATGGGAGCAGGGTCATATTCCCAGCTTCTTATGATCCATCAGAGCTCTCGGGT
 
. : . : . : . : . : . :
rJMSF019D16+ AAAATTATTGAATGCTCTTGGGATTCTGATAATCAAGTGTGGACGTGCATGAGGGTTAGG
                      ____________________________________________________________
consensus AAAATTATTGAATGCTCTTGGGATTCTGATAATCAAGTGTGGACGTGCATGAGGGTTAGG
 
. : . : . : . : . : . :
rJMSF019D16+ GTAGATAAAGGAACACCGAATGACTTCAACACATATCGAAAGGTTTTGAGAAGTATCACC
                      ____________________________________________________________
consensus GTAGATAAAGGAACACCGAATGACTTCAACACATATCGAAAGGTTTTGAGAAGTATCACC
 
. : . : . : . : . : . :
rJMSF019D16+ GACAATATCACGGAGGACATTTTGTTAGCTGAGATCCGTGAGATTATTTGTTTGCCAATG
                      ____________________________________________________________
consensus GACAATATCACGGAGGACATTTTGTTAGCTGAGATCCGTGAGATTATTTGTTTGCCAATG
 
. : . : . : . : . : . :
rJMSF019D16+ TATGCAGACAGGATCCAAATTGAAAGCAAAGGTCAAGCACGGAGAAGGTAGTAAGTCATA
                      ____________________________________________________________
consensus TATGCAGACAGGATCCAAATTGAAAGCAAAGGTCAAGCACGGAGAAGGTAGTAAGTCATA
 
. : . : . : . : . : . :
rJMSF019D16+ AACAAGCGGATACTAGTAACTAGACAGACGGGTTTCATATTTAGAGTTGCAATTGTCGGT
                      ____________________________________________________________
consensus AACAAGCGGATACTAGTAACTAGACAGACGGGTTTCATATTTAGAGTTGCAATTGTCGGT
 
. : . : . : . : . : . :
rJMSF019D16+ TGGCTTATAGTTTAGCTATGGGTCTGGTCAACACACATGGTGCTTTATGTTGGTGACTTG
                      ____________________________________________________________
consensus TGGCTTATAGTTTAGCTATGGGTCTGGTCAACACACATGGTGCTTTATGTTGGTGACTTG
 
. : . : . : . : . : . :
rJMSF019D16+ AGCATTATAGGATTGGCATGTGGTGGAAGTTGGGGCTGGAGTTGTTTTAGCTNTACAGTN
                      ____________________________________________________________
consensus AGCATTATAGGATTGGCATGTGGTGGAAGTTGGGGCTGGAGTTGTTTTAGCTNTACAGTN
 
. : . : . : . : . : . :
rJMSF019D16+ TTACAAATTGCAGGAATTAGCGATAGAACCGAACCACATGTATATTNGTTCTTNCAGCAT
                      ____________________________________________________________
consensus TTACAAATTGCAGGAATTAGCGATAGAACCGAACCACATGTATATTNGTTCTTNCAGCAT