Contig 005663:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034F08Sequence575005663 (2)ref|XP_009610808.1|1e-27PREDICTED: autophagy-related protein 13 [Nicotiana tomentosiformis] ref|XP_00961
JMSF017P07Sequence495002188 (3)ref|XP_009610808.1|3e-52PREDICTED: autophagy-related protein 13 [Nicotiana tomentosiformis] ref|XP_00961753005663 (2)ref|XP_009610808.1|6e-18PREDICTED: autophagy-related protein 13 [Nicotiana tomentosiformis] ref|XP_00961

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF017P07+ AAGTGGTTCGCCACGTGTTGGATTCTCTCGAAG
                      ____________________________________________________________
consensus AAGTGGTTCGCCACGTGTTGGATTCTCTCGAAG
 
. : . : . : . : . : . :
rJMFF034F08+ TTTCTTGCCCATTTAT
rJMSF017P07+ TTCCAGTAGATTATCTTTCCAGGATGACTTGGATGACTCTGATTTTTCTTGCCCATTTAT
                      ____________________________________________________________
consensus TTCCAGTAGATTATCTTTCCAGGATGACTTGGATGACTCTGATTTTTCTTGCCCATTTAT
 
. : . : . : . : . : . :
rJMFF034F08+ CGTTGACGATGTTGATACTTCTGATTCCCAATTCAGCAGCCAAAACCNTAATGCCAAGAA
rJMSF017P07+ CGTTGACGATTTTGATACTTCTGATTCCCAATTCAGCAGCCAAAACCCTAATGCCAAGAA
                      ____________________________________________________________
consensus CGTTGACGATTTTGATACTTCTGATTCCCAATTCAGCAGCCAAAACCCTAATGCCAAGAA
 
. : . : . : . : . : . :
rJMFF034F08+ GGATTCAGAATCTTCTTCACAAGCATTTCAGGGAAGCAGAAAATCACAGGATGCTGCTGT
rJMSF017P07+ GGATTCAGAATCTTCTTCACAAGCATTTCAGGGAAGCAGAAAATCACAGGATGCTGCTGT
                      ____________________________________________________________
consensus GGATTCAGAATCTTCTTCACAAGCATTTCAGGGAAGCAGAAAATCACAGGATGCTGCTGT
 
. : . : . : . : . : . :
rJMFF034F08+ GGGTGCCCTTGTTCAAATGCTCAAGAATGCTCCTCCATTACGTCAAGATTCTAGCTGCCA
rJMSF017P07+ GGGTGCCCTTGTTCAAATGCTCAAGAATGCTCCTCCATTACGTCAAGATTCTAGCTGCCA
                      ____________________________________________________________
consensus GGGTGCCCTTGTTCAAATGCTCAAGAATGCTCCTCCATTACGTCAAGATTCTAGCTGCCA
 
. : . : . : . : . : . :
rJMFF034F08+ CTCCGTAAAGACTGAACTGGTGGGAGGAATTGGCGCTGTTTCCGAGTTCTCTGGTTCTCG
rJMSF017P07+ CTCCGTAAAGACTGAACTGGTGGGAGGAATTGGCGCTGTTTCCGAGTTCTCTGGTTCTCG
                      ____________________________________________________________
consensus CTCCGTAAAGACTGAACTGGTGGGAGGAATTGGCGCTGTTTCCGAGTTCTCTGGTTCTCG
 
. : . : . : . : . : . :
rJMFF034F08+ GAAGACTTTGGATGCATTGGAGGAGCTCAAAGCTTACAAAGAATTGAAGGAACTTATTCT
rJMSF017P07+ GAAGACTTTGGATGCATTGGAGGAGCTCAAAGCTTACAAAGAATTGAAGGAACTTATTCT
                      ____________________________________________________________
consensus GAAGACTTTGGATGCATTGGAGGAGCTCAAAGCTTACAAAGAATTGAAGGAACTTATTCT
 
. : . : . : . : . : . :
rJMFF034F08+ TTCCAAGAGTGCAACCAGAACCAGCTCAGTCAGCAAGAGCTAAACTCAGCCTGCAGAACT
rJMSF017P07+ TTCCAAGAGTGCAACCAGAACCAGCTCAGTCAGCAAGAGCTAAACTCAGCCTGCAGAACT
                      ____________________________________________________________
consensus TTCCAAGAGTGCAACCAGAACCAGCTCAGTCAGCAAGAGCTAAACTCAGCCTGCAGAACT
 
. : . : . : . : . : . :
rJMFF034F08+ ATGATGCATATACTCCACTTTCACACTGCTACATGGCAATAGGACTTGAGACGGTTGATC
rJMSF017P07+ ATGATGCATATACTCCACTTTCACACTGCTACATGGCAATAGGACTTGAGACGGTTGATC
                      ____________________________________________________________
consensus ATGATGCATATACTCCACTTTCACACTGCTACATGGCAATAGGACTTGAGACGGTTGATC
 
. : . : . : . : . : . :
rJMFF034F08+ TATAACCTAACCAGGTAGGTATTAGTGGATTGTGTACAATGTATATAGCTGCTGACACAG
rJMSF017P07+ TATAACCTAACCAGGTAGGTATTAGTGGATTGTGTACAATGTATATAGCTGCTGACACAG
                      ____________________________________________________________
consensus TATAACCTAACCAGGTAGGTATTAGTGGATTGTGTACAATGTATATAGCTGCTGACACAG
 
. : . : . : . : . : . :
rJMFF034F08+ GAAAATGTTGTATTTGCTTAGCAAGAATGGTTTGCATCTGGCAAACATCATGAAAGTTGT
rJMSF017P07+ GAAAATGTTGTATTTGCTTAGCAAGAATGGTTTGCATCTGGCAAACATCATGAAAGTTGT
                      ____________________________________________________________
consensus GAAAATGTTGTATTTGCTTAGCAAGAATGGTTTGCATCTGGCAAACATCATGAAAGTTGT
 
. : . : . : . : . : . :
rJMFF034F08+ CATAGCATTNGAATCATCC
rJMSF017P07+ CATAGCATTTGAATCATCCTACATTCCTACCACATAGATAAGCCAGAAATACTGTCTTGT
                      ____________________________________________________________
consensus CATAGCATTTGAATCATCCTACATTCCTACCACATAGATAAGCCAGAAATACTGTCTTGT
 
. : . : . : . : . : . :
rJMSF017P07+ GTATATTAGATCTCATGATCTACACAATATGATGAGAGAGGGTGTTCTTTCATCATCATG
                      ____________________________________________________________
consensus GTATATTAGATCTCATGATCTACACAATATGATGAGAGAGGGTGTTCTTTCATCATCATG