Contig 005643:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF013K24+                                                              ATGCCGAG
                      ____________________________________________________________
consensus                                                                 ATGCCGAG
 
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rJMSF013K24+          TTGGGGAANCAGTAGGGAAGCTGAGAAATGACTACTGCAGCTTTCTTGGGGGTTCGAAGG
                      ____________________________________________________________
consensus             TTGGGGAANCAGTAGGGAAGCTGAGAAATGACTACTGCAGCTTTCTTGGGGGTTCGAAGG
 
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rJMSF013K24+          TCCCCGTTCTACCTGTGGTTGGAAAGAAATGCTTGCACAGAAGAAGCTTAGTGGTGTCTG
                      ____________________________________________________________
consensus             TCCCCGTTCTACCTGTGGTTGGAAAGAAATGCTTGCACAGAAGAAGCTTAGTGGTGTCTG
 
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rJMSF013K24+          CATCATTGTTGCCAGCTTCTCAAATTGCTAGCAGCGCTTTTACATGGGGAACCATAGCTG
                      ____________________________________________________________
consensus             CATCATTGTTGCCAGCTTCTCAAATTGCTAGCAGCGCTTTTACATGGGGAACCATAGCTG
 
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rJMSF006G14+                              ATGGTTGTGGCGCCCAGAGCTGAGTTGACCAAAAACNTAA
rJMSF013K24+          TTCTTCCATTTTATACTCTCATGGTTGTGGCGCCCAGAGCTGAGTTGACCAAAAACTTAA
                      ____________________________________________________________
consensus             TTCTTCCATTTTATACTCTCATGGTTGTGGCGCCCAGAGCTGAGTTGACCAAAAACTTAA
 
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rJMSF006G14+          TGGAAAGTGGCATACCTTTTATTGCGCTTGGACTATAGTATGGCTATCTTCTATATCTCT
rJMSF013K24+          TGGAAAGTGGCATACCTTTTATTGCGCTTGGACTATTGTATGGCTATCTTCTATATCTCT
                      ____________________________________________________________
consensus             TGGAAAGTGGCATACCTTTTATTGCGCTTGGACTATTGTATGGCTATCTTCTATATCTCT
 
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rJMSF006G14+          CTTGGACGCCTGATACGATACGGCTGATGTTTGCTAGCCAATACTTGCTGCCAGTGCTTC
rJMSF013K24+          CTTGGACGCCTGATACGATACGGCTGATGTTTGCTAGCCAATACTTGCTGCCAGAGCTTC
                      ____________________________________________________________
consensus             CTTGGACGCCTGATACGATACGGCTGATGTTTGCTAGCCAATACTTGCTGCCAGTGCTTC
 
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rJMSF006G14+          CAGGTATAGCTAGGATGTTTGCCAACGAGATGACATTAGCTTCTGCATGGATCCATCTCT
rJMSF013K24+          CAGGTATAGCTAGGATGTTTGCCAACGAGATGACATTAGCTTCTGCATGGATCCATCTCT
                      ____________________________________________________________
consensus             CAGGTATAGCTAGGATGTTTGCCAACGAGATGACATTAGCTTCTGCATGGATCCATCTCT
 
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rJMSF006G14+          TGGCTGTGGATCTTTTTGCTGCAAGGCAAGTATACCAAGATGGACTGCAGAATGATGTGG
rJMSF013K24+          TGGCTGTGGATCTTTTTGCTGCAAGGCAAGTATACCAAGATGGACTGCAGAATGATGTGG
                      ____________________________________________________________
consensus             TGGCTGTGGATCTTTTTGCTGCAAGGCAAGTATACCAAGATGGACTGCAGAATGATGTGG
 
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rJMSF006G14+          AGATCCGGCATTCTGTGTCGCTATGCTTGCTCTTTTGCCCCATTGGAATTCTTGTTCATT
rJMSF013K24+          AGATCCGGCATTCTGTGTCGCTATGCTTGCTCTTTTGCCCCATTGGAATTCTTGTTCATT
                      ____________________________________________________________
consensus             AGATCCGGCATTCTGTGTCGCTATGCTTGCTCTTTTGCCCCATTGGAATTCTTGTTCATT
 
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rJMSF006G14+          TCATAACCAAAGCTCTACCCAGAAATCNTGAGAAAAAGGAAAGCACAATTCATTAACAGA
rJMSF013K24+          TCATAACCAAAGCTCTACCCAGAAATCCTGAGAAAAAGGAAAGCACAATTCATTAACAGA
                      ____________________________________________________________
consensus             TCATAACCAAAGCTCTACCCAGAAATCCTGAGAAAAAGGAAAGCACAATTCATTAACAGA
 
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rJMSF006G14+          TGAACAATTCATTTTTACAGCATTGTTGCCTAGTTGTAGCTCTCAGCTCGGTGTATAATT
rJMSF013K24+          TGAACAATTCATTTTTACAGCATTGTTGCCTAGTTGTAGCTCTCAGCTCGGTGTATAATT
                      ____________________________________________________________
consensus             TGAACAATTCATTTTTACAGCATTGTTGCCTAGTTGTAGCTCTCAGCTCGGTGTATAATT
 
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rJMSF006G14+          GCTTCAATGGAGACATTTTAGAGCTATA                                
rJMSF013K24+          GCTTCAATGGAGACATTTTAGAGCTATACAAGCGCGCTCTCTCTCTCTAATGTAACATTT
                      ____________________________________________________________
consensus             GCTTCAATGGAGACATTTTAGAGCTATACAAGCGCGCTCTCTCTCTCTAATGTAACATTT