Contig 005641:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013B11Sequence501003601 (2)gb|KDO36325.1|7e-33hypothetical protein CISIN_1g046287mg, partial [Citrus sinensis]727005641 (2)ref|XP_009598779.1|5e-111PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 2-like, partial [Nicot
JMSF023A19Sequence391003601 (2)gb|KDO36325.1|2e-49hypothetical protein CISIN_1g046287mg, partial [Citrus sinensis]723005641 (2)ref|XP_009598779.1|6e-109PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 2-like, partial [Nicot

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF023A19+ AGATA
rJMSF013B11+ TTAGATA
                      ____________________________________________________________
consensus TTAGATA
 
. : . : . : . : . : . :
rJMSF023A19+ AGGAATTCATCAACACTGCAATGAGTATTGATCCTGAATGGAAAATGGTAGGGCCCGATC
rJMSF013B11+ AGGAATTCATCAACACTGCAATGAGTATTGATCCTGAATGGAAAATGGTAAGGCCCGATC
                      ____________________________________________________________
consensus AGGAATTCATCAACACTGCAATGAGTATTGATCCTGAATGGAAAATGGTAGGGCCCGATC
 
. : . : . : . : . : . :
rJMSF023A19+ TTGGAAGAATTGAGAAGTGGGTTCTGCGCAATGCTTTTGATGATGAGCAAGAACCTTATC
rJMSF013B11+ TTGGAAGAATTGAGAAGTGGGTTCTGCGCAATGCTTTTGATGATGAGCAAGAACCTTATC
                      ____________________________________________________________
consensus TTGGAAGAATTGAGAAGTGGGTTCTGCGCAATGCTTTTGATGATGAGCAAGAACCTTATC
 
. : . : . : . : . : . :
rJMSF023A19+ TGCCAAAGCATATTTTGTACAGGCAAAAGGAGCAGTTCAGTGATGGAGTTGGGTATAGTT
rJMSF013B11+ TGCCAAAGCATATTTTGTACAGGCAAAAGGAGCAGTTCAGTGATGGAGTTGGGTATAGTT
                      ____________________________________________________________
consensus TGCCAAAGCATATTTTGTACAGGCAAAAGGAGCAGTTCAGTGATGGAGTTGGGTATAGTT
 
. : . : . : . : . : . :
rJMSF023A19+ GGATTGATGGCTTGAAGGATCATGCAAATGGACTGGTTTCTGACTCAATGTTGGCAAATG
rJMSF013B11+ GGATTGATGGCTTGAAGGATCATGCAAATGGACTGGTTTCTGACTCAATGTTGGCAAATG
                      ____________________________________________________________
consensus GGATTGATGGCTTGAAGGATCATGCAAATGGACTGGTTTCTGACTCAATGTTGGCAAATG
 
. : . : . : . : . : . :
rJMSF023A19+ CAAGCTTCGTTTACCCAGAGAACACCCCAACAACGAAAGAAGGATACTATTATAGGACAA
rJMSF013B11+ CAAGCTTCGTTTACCCAGAGAACACCCCAACAACGAAAGAAGGATACTATTATAGGACAA
                      ____________________________________________________________
consensus CAAGCTTCGTTTACCCAGAGAACACCCCAACAACGAAAGAAGGATACTATTATAGGACAA
 
. : . : . : . : . : . :
rJMSF023A19+ TCTTCGAGAAATTCTTCCCCAAGAACGCTGCAAGGTCAACAGTTCCCGGGGGGCCAAGCG
rJMSF013B11+ TCTTCGAGAAATTCTTCCCCAAGAACGCTGCAAGGTCAACAGTTCCCGGGGGGCCAAGCG
                      ____________________________________________________________
consensus TCTTCGAGAAATTCTTCCCCAAGAACGCTGCAAGGTCAACAGTTCCCGGGGGGCCAAGCG
 
. : . : . : . : . : . :
rJMSF023A19+ TGGCATGCAGCACTGCAAGAGCTGTAGAATGGGATGCGTCCTGGTCAAAGAATCTAGATC
rJMSF013B11+ TGGCATGCAGCACTGCAAGAGCTGTAGAATGGGATGCGTCCTGGTCAAAGAATCTAGATC
                      ____________________________________________________________
consensus TGGCATGCAGCACTGCAAGAGCTGTAGAATGGGATGCGTCCTGGTCAAAGAATCTAGATC
 
. : . : . : . : . : . :
rJMSF023A19+ CGTCTGGCAGAGCAGCACTCGGGATTCATGCAGCAGCGTATGAAGATGCCCCGGATGCAA
rJMSF013B11+ CGTCTGGCAGAGCAGCACTCGGGATTCATGCAGCAGCGTATGAAGATGCCCCGGATGCAA
                      ____________________________________________________________
consensus CGTCTGGCAGAGCAGCACTCGGGATTCATGCAGCAGCGTATGAAGATGCCCCGGATGCAA
 
. : . : . : . : . : . :
rJMSF023A19+ AGACGACCACTTCATCTGAAACCTCAGTTCAGAAACTGGAAGTAGAGAAGGCTAGTGTTG
rJMSF013B11+ AGACGACCACTTCATCTGAAACCTCAGTTCAGAAACTGGAAGTAGAGAAGGCTAGTGTTG
                      ____________________________________________________________
consensus AGACGACCACTTCATCTGAAACCTCAGTTCAGAAACTGGAAGTAGAGAAGGCTAGTGTTG
 
. : . : . : . : . : . :
rJMSF023A19+ CAGTTTGATCGTGTATTTAGTCGCGAAGGTATCAATTTCTTTGG-TTTGCAGAATTTAAA
rJMSF013B11+ CAGTTTGATCGTGTATTTAGTCGCGAAGGTATCAATTTCTTTGGTTTTGCAGAATTTAAA
                      ____________________________________________________________
consensus CAGTTTGATCGTGTATTTAGTCGCGAAGGTATCAATTTCTTTGGTTTTGCAGAATTTAAA
 
. : . : . : . : . : . :
rJMSF023A19+ AGAGCAATAGCATATCGCACTGCAAGTTTGATTGTGTATTTTATGTCACTGGTACACTGT
rJMSF013B11+ AGAGCAATAGCATATCGCACTGCAAGTTTGATTGTGTATTTTATGTCACTGGTACACTGT
                      ____________________________________________________________
consensus AGAGCAATAGCATATCGCACTGCAAGTTTGATTGTGTATTTTATGTCACTGGTACACTGT
 
. : . : . : . : . : . :
rJMSF023A19+ TAAAACAAACATTAGCTCTGCAAGTTTGATTGTGTATTTTATATCACTGGTACTGTGAA
rJMSF013B11+ TAAAACAAACATTAGCTCTGCAAGTTTGATTGTGTATTTTATATCACTGGTACTGTGAAC
                      ____________________________________________________________
consensus TAAAACAAACATTAGCTCTGCAAGTTTGATTGTGTATTTTATATCACTGGTACTGTGAAC